CuGenDBv2

Gene ID	Carg07084
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Glutamine synthetase
Genome location	Carg_Chr17:7704406..7705823
RNA-Seq Expression	Carg07084
Synteny	Carg07084
Gene Ontology terms	GO:0006542 - glutamine biosynthetic process (biological process) GO:0004356 - glutamate-ammonia ligase activity (molecular function)
InterPro domains	IPR036651 - Glutamine synthetase, N-terminal domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7014276.1 hypothetical protein SDJN02_24453, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.2e-42

100

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Query:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKARAVFKDPFRRGNNILVMCDAYTSAGEPIPTNTRFNAAKIFSEPDVVAEEPW
        MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKARAVFKDPFRRGNNILVMCDAYTSAGEPIPTNTRFNAAKIFSEPDVVAEEPW
Subjt:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKARAVFKDPFRRGNNILVMCDAYTSAGEPIPTNTRFNAAKIFSEPDVVAEEPW

XP_008461372.1 PREDICTED: glutamine synthetase nodule isozyme-like [Cucumis melo]

3.0e-35

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Query:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE
        MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR                                     AVFKDPFRRGNNILVMCDAYT AGE
Subjt:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE

Query:  PIPTNTRFNAAKIFSEPDVVAEEPW
        PIPTN RFNAAKIFS PDVVAEEPW
Subjt:  PIPTNTRFNAAKIFSEPDVVAEEPW

XP_022954274.1 glutamine synthetase nodule isozyme-like [Cucurbita moschata]

4.2e-37

70.4

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Query:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE
        MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR                                     AVFKDPFRRGNNILVMCDAYTSAGE
Subjt:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE

Query:  PIPTNTRFNAAKIFSEPDVVAEEPW
        PIPTNTRFNAAKIFSEPDVVAEEPW
Subjt:  PIPTNTRFNAAKIFSEPDVVAEEPW

XP_022991488.1 glutamine synthetase nodule isozyme-like [Cucurbita maxima]

6.1e-36

68.8

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Query:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE
        MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR                                     AVFKDPFRRGNNILVMCDAYTSAGE
Subjt:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE

Query:  PIPTNTRFNAAKIFSEPDVVAEEPW
        PIP NTRF+AAKIFSEPDVVAEEPW
Subjt:  PIPTNTRFNAAKIFSEPDVVAEEPW

XP_023548137.1 glutamine synthetase nodule isozyme-like [Cucurbita pepo subsp. pepo]

1.6e-36

69.6

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Query:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE
        MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR                                     AVFKDPFRRGN+ILVMCDAYTSAGE
Subjt:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE

Query:  PIPTNTRFNAAKIFSEPDVVAEEPW
        PIPTNTRFNAAKIFSEPDVVAEEPW
Subjt:  PIPTNTRFNAAKIFSEPDVVAEEPW

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KBC7 Glutamine synthetase

2.1e-34

66.4

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Query:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE
        MSLLSDLINL+LT+TTEKIIAEYVWIGGSGLDLRSKAR                                     AVFKDPFRRGNNILVMCDAYT AGE
Subjt:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE

Query:  PIPTNTRFNAAKIFSEPDVVAEEPW
        PIPTN RFNAAKIFS PDVVAEEPW
Subjt:  PIPTNTRFNAAKIFSEPDVVAEEPW

A0A1S3CFV7 Glutamine synthetase

1.5e-35

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Query:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE
        MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR                                     AVFKDPFRRGNNILVMCDAYT AGE
Subjt:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE

Query:  PIPTNTRFNAAKIFSEPDVVAEEPW
        PIPTN RFNAAKIFS PDVVAEEPW
Subjt:  PIPTNTRFNAAKIFSEPDVVAEEPW

A0A5A7UYL4 Glutamine synthetase

4.3e-35

67.2

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Query:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE
        MSLLSDLINLNLT+TTEKIIAEYVWIGGSGLDLRSKAR                                     AVFKDPFRRGNNILVMCDAYT AGE
Subjt:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE

Query:  PIPTNTRFNAAKIFSEPDVVAEEPW
        PIPTN RFNAAKIFS PDVVAEEPW
Subjt:  PIPTNTRFNAAKIFSEPDVVAEEPW

A0A6J1GSI1 Glutamine synthetase

2.1e-37

70.4

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Query:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE
        MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR                                     AVFKDPFRRGNNILVMCDAYTSAGE
Subjt:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE

Query:  PIPTNTRFNAAKIFSEPDVVAEEPW
        PIPTNTRFNAAKIFSEPDVVAEEPW
Subjt:  PIPTNTRFNAAKIFSEPDVVAEEPW

A0A6J1JWD1 Glutamine synthetase

3.0e-36

68.8

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Query:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE
        MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR                                     AVFKDPFRRGNNILVMCDAYTSAGE
Subjt:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE

Query:  PIPTNTRFNAAKIFSEPDVVAEEPW
        PIP NTRF+AAKIFSEPDVVAEEPW
Subjt:  PIPTNTRFNAAKIFSEPDVVAEEPW

SwissProt top hits

e value

%identity

Alignment

P04770 Glutamine synthetase PR-1

4.9e-36

63.2

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Query:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE
        MSLLSDLINLNL+DTTEK+IAEY+WIGGSGLDLRSKAR                                     A+FKDPFRRGNNILV+CDAYT AGE
Subjt:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE

Query:  PIPTNTRFNAAKIFSEPDVVAEEPW
        PIPTN R NAAKIFS PDVVAEEPW
Subjt:  PIPTNTRFNAAKIFSEPDVVAEEPW

P12424 Glutamine synthetase

5.4e-35

62.4

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Query:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE
        MSLLSDLINLNL+D+TEKIIAEY+WIGGSG+DLRSKAR                                     A+FKDPFRRGNNILVMCDAYT AGE
Subjt:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE

Query:  PIPTNTRFNAAKIFSEPDVVAEEPW
        PIPTN R  AAKIFS PDVVAEEPW
Subjt:  PIPTNTRFNAAKIFSEPDVVAEEPW

P32289 Glutamine synthetase nodule isozyme

1.3e-36

64.8

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Query:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE
        MSLLSDLINLNL+DTTEKIIAEY+WIGGSGLDLRSKAR                                     A+FKDPFRRGNNILVMCDAYT AGE
Subjt:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE

Query:  PIPTNTRFNAAKIFSEPDVVAEEPW
        PIPTN R NAAKIFS PDVVAEEPW
Subjt:  PIPTNTRFNAAKIFSEPDVVAEEPW

P38561 Glutamine synthetase root isozyme 3

4.6e-34

58.4

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Query:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE
        M+ L+DL+NLNL+DTTEKIIAEY+WIGGSG+DLRSKAR                                     A+FKDPFRRGNNILVMCD YT AGE
Subjt:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE

Query:  PIPTNTRFNAAKIFSEPDVVAEEPW
        PIPTN R+NAAKIFS P+V AEEPW
Subjt:  PIPTNTRFNAAKIFSEPDVVAEEPW

P52782 Glutamine synthetase nodule isozyme

2.0e-34

60.8

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Query:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE
        MS+LSDLINLNL+DTTEKIIAEY+W+GGSG+DLRSKAR                                     A+FKDPFRRGNNILVMCD YT AGE
Subjt:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE

Query:  PIPTNTRFNAAKIFSEPDVVAEEPW
        PIPTN R  AAKIFS PDVVAEEPW
Subjt:  PIPTNTRFNAAKIFSEPDVVAEEPW

Arabidopsis top hits

e value

%identity

Alignment

AT1G66200.1 glutamine synthase clone F11

3.3e-32

53.6

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Query:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE
        MSLL+DL+NL+++D +EKIIAEY+W+GGSG+D+RSKAR                                     A+FKDPFRRGNNILVMCDAYT AGE
Subjt:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE

Query:  PIPTNTRFNAAKIFSEPDVVAEEPW
        PIPTN R  AA+IF+ PDV+AE PW
Subjt:  PIPTNTRFNAAKIFSEPDVVAEEPW

AT1G66200.2 glutamine synthase clone F11

3.3e-32

53.6

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Query:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE
        MSLL+DL+NL+++D +EKIIAEY+W+GGSG+D+RSKAR                                     A+FKDPFRRGNNILVMCDAYT AGE
Subjt:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE

Query:  PIPTNTRFNAAKIFSEPDVVAEEPW
        PIPTN R  AA+IF+ PDV+AE PW
Subjt:  PIPTNTRFNAAKIFSEPDVVAEEPW

AT3G17820.1 glutamine synthetase 1.3

1.6e-34

58.4

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Query:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE
        MSLLSDL+NLNLTD T KIIAEY+WIGGSG+D+RSKAR                                     A+FKDPFR+GNNILVMCDAYT AG+
Subjt:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE

Query:  PIPTNTRFNAAKIFSEPDVVAEEPW
        PIPTN R NAAKIFS PDV  EEPW
Subjt:  PIPTNTRFNAAKIFSEPDVVAEEPW

AT5G16570.1 glutamine synthetase 1;4

7.5e-32

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Query:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE
        MS L+DLINL+L+D+T++IIAEY+WIGGSGLD+RSKAR                                     A+FKDPFRRGNNILVMCDAYT AGE
Subjt:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE

Query:  PIPTNTRFNAAKIFSEPDVVAEEPW
        PIPTN R  AAKIF +P VVAEE W
Subjt:  PIPTNTRFNAAKIFSEPDVVAEEPW

AT5G37600.1 glutamine synthase clone R1

1.0e-33

56.8

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Query:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE
        MSL+SDLINLNL+D+T+KIIAEY+W+GGSG+D+RSKAR                                     A+FKDPFRRGNNILVMCDAYT AGE
Subjt:  MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKAR-------------------------------------AVFKDPFRRGNNILVMCDAYTSAGE

Query:  PIPTNTRFNAAKIFSEPDVVAEEPW
        PIPTN R  AAK+FS PDV AE PW
Subjt:  PIPTNTRFNAAKIFSEPDVVAEEPW

Sequences

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CDS sequence

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ATGTCTCTCCTCTCCGATCTCATCAATCTTAACCTCACGGACACCACCGAGAAGATCATTGCCGAATACGTATGGATCGGAGGATCGGGACTCGATTTGAGAAGCAAAGC
TAGGGCGGTTTTCAAGGATCCTTTCAGAAGAGGGAACAACATCTTGGTGATGTGTGATGCCTATACGTCAGCTGGCGAGCCGATTCCCACCAACACGAGATTCAACGCCG
CCAAGATTTTTAGCGAGCCGGACGTTGTTGCCGAGGAACCTTGGTAA

mRNA sequence

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Protein sequence

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MSLLSDLINLNLTDTTEKIIAEYVWIGGSGLDLRSKARAVFKDPFRRGNNILVMCDAYTSAGEPIPTNTRFNAAKIFSEPDVVAEEPW

Carg07084 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome