| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6575744.1 DNA-directed RNA polymerase III subunit RPC8, partial [Cucurbita argyrosperma subsp. sororia] | 1.5e-115 | 99.05 | Show/hide |
Query: MLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRISLGFFEDIYVPIHLLPS
MLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRISLGFFEDIYVPIHLLPS
Subjt: MLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRISLGFFEDIYVPIHLLPS
Query: PSEFKPDPKNGGKRRWVWDYDGQPYDIYETDEIKFRIHSIDYPAIPVDQQPNESNSKFQMEEQPKENVNVKPFAPMVVTATIDYDGLGPVSWWDGSGDAD
PSEFKPDPKNGGKRRWVWDYDGQPYDIYETDEIKFRIHSIDYPAIPVDQQPNESNSKFQMEEQPKENVNVKPFAPMVVTATIDYDGLGPVSWWDGSGDAD
Subjt: PSEFKPDPKNGGKRRWVWDYDGQPYDIYETDEIKFRIHSIDYPAIPVDQQPNESNSKFQMEEQPKENVNVKPFAPMVVTATIDYDGLGPVSWWDGSGDAD
Query: AEG--EAEEDS
AEG EAEEDS
Subjt: AEG--EAEEDS
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| KAG7014295.1 DNA-directed RNA polymerase III subunit RPC8 [Cucurbita argyrosperma subsp. argyrosperma] | 8.6e-127 | 100 | Show/hide |
Query: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
Subjt: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
Query: LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQPYDIYETDEIKFRIHSIDYPAIPVDQQPNESNSKFQMEEQPKENVNVKPFAPMVVTATIDY
LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQPYDIYETDEIKFRIHSIDYPAIPVDQQPNESNSKFQMEEQPKENVNVKPFAPMVVTATIDY
Subjt: LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQPYDIYETDEIKFRIHSIDYPAIPVDQQPNESNSKFQMEEQPKENVNVKPFAPMVVTATIDY
Query: DGLGPVSWWDGSGDADAEGEAEEDS
DGLGPVSWWDGSGDADAEGEAEEDS
Subjt: DGLGPVSWWDGSGDADAEGEAEEDS
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| XP_022954042.1 DNA-directed RNA polymerase III subunit RPC8 [Cucurbita moschata] | 1.4e-124 | 98.68 | Show/hide |
Query: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
Subjt: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
Query: LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQPYDIYETDEIKFRIHSIDYPAIPVDQQPNESNSKFQMEEQPKENVNVKPFAPMVVTATIDY
LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQPYDIYETDEIKFRIHSIDYPAIPVDQQPNESNSKFQMEEQPKENVNVKPFAPMVVTATIDY
Subjt: LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQPYDIYETDEIKFRIHSIDYPAIPVDQQPNESNSKFQMEEQPKENVNVKPFAPMVVTATIDY
Query: DGLGPVSWWDGSG--DADAEGEAEEDS
DGLGPVSWWDGSG DADAE EAEEDS
Subjt: DGLGPVSWWDGSG--DADAEGEAEEDS
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| XP_022991804.1 DNA-directed RNA polymerase III subunit RPC8 [Cucurbita maxima] | 7.6e-123 | 96.89 | Show/hide |
Query: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVA LGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
Subjt: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
Query: LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQPYDIYETDEIKFRIHSIDYPAIPVDQQPNESNSKFQMEEQPKENVNVKPFAPMVVTATIDY
LGFFEDIYVPIHLLPSPSEFKPDPKN GKRRWVWDYDGQPYDIYETDEIKFRIHSIDYP IPVDQQPNESNSKFQMEEQPKENVNVKPFAPMVVTATIDY
Subjt: LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQPYDIYETDEIKFRIHSIDYPAIPVDQQPNESNSKFQMEEQPKENVNVKPFAPMVVTATIDY
Query: DGLGPVSWWDGSGDADAEGEAEEDS
DGLGPVSWWDGSGDADAE EAE ++
Subjt: DGLGPVSWWDGSGDADAEGEAEEDS
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| XP_023547503.1 DNA-directed RNA polymerase III subunit RPC8 [Cucurbita pepo subsp. pepo] | 3.6e-125 | 98.67 | Show/hide |
Query: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVA LGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
Subjt: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
Query: LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQPYDIYETDEIKFRIHSIDYPAIPVDQQPNESNSKFQMEEQPKENVNVKPFAPMVVTATIDY
LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQPYDIYETDEIKFRIHSIDYPAIPVDQQPNESNSKFQMEEQPKENVNVKPFAPMVVTATIDY
Subjt: LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQPYDIYETDEIKFRIHSIDYPAIPVDQQPNESNSKFQMEEQPKENVNVKPFAPMVVTATIDY
Query: DGLGPVSWWDGSGDADAEGEAEEDS
DGLGPVSWWDGSGDADA+ EAEEDS
Subjt: DGLGPVSWWDGSGDADAEGEAEEDS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S3CEN6 DNA-directed RNA polymerase III subunit RPC8 isoform X1 | 1.6e-102 | 81.33 | Show/hide |
Query: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
MFYLSRIEHTLRVPPS+L+LPILDAIKGELEKLF+DKVVA LGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRP+ GE+IIGKV+ES+ NGLRIS
Subjt: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
Query: LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQPYDIYETDEIKFRIHSIDYPAIPVDQQPNESNSKFQMEEQPKENVNVKPFAPMVVTATIDY
LGFFEDIYVP+ L+PS SEF PD NGG+RRWVW Y+ P+DIYE+DEIKF+IHSI+YPAI V +QP ESNSKF MEE+PKE++NVKPFAPMV+TA++D
Subjt: LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQPYDIYETDEIKFRIHSIDYPAIPVDQQPNESNSKFQMEEQPKENVNVKPFAPMVVTATIDY
Query: DGLGPVSWWDGSGDADAEGEAEEDS
DGLGPVSWWDGSG+A+AE E EEDS
Subjt: DGLGPVSWWDGSGDADAEGEAEEDS
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| A0A5A7UWI5 DNA-directed RNA polymerase III subunit RPC8 isoform X1 | 1.6e-102 | 81.33 | Show/hide |
Query: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
MFYLSRIEHTLRVPPS+L+LPILDAIKGELEKLF+DKVVA LGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRP+ GE+IIGKV+ES+ NGLRIS
Subjt: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
Query: LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQPYDIYETDEIKFRIHSIDYPAIPVDQQPNESNSKFQMEEQPKENVNVKPFAPMVVTATIDY
LGFFEDIYVP+ L+PS SEF PD NGG+RRWVW Y+ P+DIYE+DEIKF+IHSI+YPAI V +QP ESNSKF MEE+PKE++NVKPFAPMV+TA++D
Subjt: LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQPYDIYETDEIKFRIHSIDYPAIPVDQQPNESNSKFQMEEQPKENVNVKPFAPMVVTATIDY
Query: DGLGPVSWWDGSGDADAEGEAEEDS
DGLGPVSWWDGSG+A+AE E EEDS
Subjt: DGLGPVSWWDGSGDADAEGEAEEDS
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| A0A6J1DFX3 DNA-directed RNA polymerase III subunit RPC8 isoform X2 | 2.1e-110 | 89.52 | Show/hide |
Query: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVA LGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPY GEIIIGKVKESDANGLRIS
Subjt: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
Query: LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQPYDIYETDEIKFRIHSIDYPAIPVDQQPNESNSKFQMEE-QPKENV-NVKPFAPMVVTATI
LGFFEDIYVPIHLLP+PSEFKPD KNGGKRRWVWDYDGQPYDIYETDEIKFRIH+I+YPAIPV +QP ESN KF EE QPKE+ NVK FAPM+VT TI
Subjt: LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQPYDIYETDEIKFRIHSIDYPAIPVDQQPNESNSKFQMEE-QPKENV-NVKPFAPMVVTATI
Query: DYDGLGPVSWWDGSGDADAEGE--AEEDS
DYDGLGPVSWWDGSGD D E E AEEDS
Subjt: DYDGLGPVSWWDGSGDADAEGE--AEEDS
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| A0A6J1GPX5 DNA-directed RNA polymerase III subunit RPC8 | 6.7e-125 | 98.68 | Show/hide |
Query: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
Subjt: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
Query: LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQPYDIYETDEIKFRIHSIDYPAIPVDQQPNESNSKFQMEEQPKENVNVKPFAPMVVTATIDY
LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQPYDIYETDEIKFRIHSIDYPAIPVDQQPNESNSKFQMEEQPKENVNVKPFAPMVVTATIDY
Subjt: LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQPYDIYETDEIKFRIHSIDYPAIPVDQQPNESNSKFQMEEQPKENVNVKPFAPMVVTATIDY
Query: DGLGPVSWWDGSG--DADAEGEAEEDS
DGLGPVSWWDGSG DADAE EAEEDS
Subjt: DGLGPVSWWDGSG--DADAEGEAEEDS
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| A0A6J1JVU8 DNA-directed RNA polymerase III subunit RPC8 | 3.7e-123 | 96.89 | Show/hide |
Query: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVA LGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
Subjt: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
Query: LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQPYDIYETDEIKFRIHSIDYPAIPVDQQPNESNSKFQMEEQPKENVNVKPFAPMVVTATIDY
LGFFEDIYVPIHLLPSPSEFKPDPKN GKRRWVWDYDGQPYDIYETDEIKFRIHSIDYP IPVDQQPNESNSKFQMEEQPKENVNVKPFAPMVVTATIDY
Subjt: LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQPYDIYETDEIKFRIHSIDYPAIPVDQQPNESNSKFQMEEQPKENVNVKPFAPMVVTATIDY
Query: DGLGPVSWWDGSGDADAEGEAEEDS
DGLGPVSWWDGSGDADAE EAE ++
Subjt: DGLGPVSWWDGSGDADAEGEAEEDS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O94285 DNA-directed RNA polymerase III subunit rpc8 | 6.0e-30 | 33.18 | Show/hide |
Query: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
MF LSR + + PS P +A+ E+ K + +KV+ +GL I VYD + G I DG++ VVF LI+FRP+ GE+++GK+K G+R++
Subjt: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
Query: LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQP--------YDIYETDEIKFRIHSIDYPAIPVDQQPNESNSKFQMEEQPKENVNVKPFAPM
+ FF+DI++P +L P F+PD +R WVW +G+ +DI E EI+F+I S D+ + + + N++ + E ++ +P
Subjt: LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQP--------YDIYETDEIKFRIHSIDYPAIPVDQQPNESNSKFQMEEQPKENVNVKPFAPM
Query: VVTATIDYDGLGPVSWW
+ A+ DGLG +WW
Subjt: VVTATIDYDGLGPVSWW
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| P35718 DNA-directed RNA polymerase III subunit RPC8 | 1.6e-27 | 31.19 | Show/hide |
Query: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
MF LS+I +R+PP H + AI +L F +K++ +GLCI++YD+ +V+ G + P DG++ V F +VF+P+ GEI+ G + + A G+++S
Subjt: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
Query: -LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQPYDIYETDE-IKFRI-HSIDYPAIPVDQQPNESNSKFQMEEQ-----PKENVNVKPFAPM
LG F+DI++P ++L + P+ + W+W D + ++ +E I+FRI + P + E + Q+E + + N KP A
Subjt: -LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQPYDIYETDE-IKFRI-HSIDYPAIPVDQQPNESNSKFQMEEQ-----PKENVNVKPFAPM
Query: VVTATIDYDGLGPVSWWD
+ + DG+G VSWW+
Subjt: VVTATIDYDGLGPVSWWD
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| Q2T9X1 DNA-directed RNA polymerase III subunit RPC8 | 9.2e-31 | 34.1 | Show/hide |
Query: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
MF L + T+R+PP + D+I EL K +KV+ +GLCI ++DI ++ ++FP DGA+ KV F +VF P+ EI+IGK+K G+ +S
Subjt: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
Query: LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQ--PYDIYET--DEIKFRIHSIDYPAIPVDQQ-PNESNSKFQMEEQPKENVNVKPFAPMVVT
LGFF+DI +P L P++F + ++ WVW+Y+ + +D+Y +E++FR+ +D + P+ + + EE PK+ AP +
Subjt: LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQ--PYDIYET--DEIKFRIHSIDYPAIPVDQQ-PNESNSKFQMEEQPKENVNVKPFAPMVVT
Query: ATIDYDGLGPVSWWDGS
+I GLG +SWW S
Subjt: ATIDYDGLGPVSWWDGS
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| Q9D2C6 DNA-directed RNA polymerase III subunit RPC8 | 3.2e-31 | 35.05 | Show/hide |
Query: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
MF L + T+R+PP + D+I EL K +KVV +GLCI ++DI ++ ++FP DGA+ KV F +VF P+ EI+IGK+K G+ +S
Subjt: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
Query: LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQ--PYDIY--ETDEIKFRIHSIDYPAIPVDQQ-PNESNSKFQMEEQPKENVNVKPFAPMVVT
LGFF+DI +P L P++F + ++ WVW+Y+ + +D+Y +EI+FR+ +D + P+ + + EE PK+ AP +
Subjt: LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQ--PYDIY--ETDEIKFRIHSIDYPAIPVDQQ-PNESNSKFQMEEQPKENVNVKPFAPMVVT
Query: ATIDYDGLGPVSWW
+I GLG +SWW
Subjt: ATIDYDGLGPVSWW
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| Q9Y535 DNA-directed RNA polymerase III subunit RPC8 | 2.4e-31 | 35.05 | Show/hide |
Query: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
MF L + T+R+PP + D+I EL K +KVV +GLCI ++DI ++ ++FP DGA+ KV F +VF P+ EI+IGK+K G+ +S
Subjt: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
Query: LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQ--PYDIY--ETDEIKFRIHSIDYPAIPVDQQ-PNESNSKFQMEEQPKENVNVKPFAPMVVT
LGFF+DI +P L P++F + ++ WVW+Y+ + +D+Y +EI+FR+ +D + P+ +++ EE PK+ AP +
Subjt: LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQ--PYDIY--ETDEIKFRIHSIDYPAIPVDQQ-PNESNSKFQMEEQPKENVNVKPFAPMVVT
Query: ATIDYDGLGPVSWW
+I GLG +SWW
Subjt: ATIDYDGLGPVSWW
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G06790.1 RNA polymerase Rpb7 N-terminal domain-containing protein | 1.4e-66 | 54.3 | Show/hide |
Query: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
MFYLS +EH+LRVPP +L+LP+ DAIK L+ +FLDKV+A LGLC+S+YDI+SV+GGF+ P DGAATYKV ++VFRP+ GE+I K KESDANGLR++
Subjt: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
Query: LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQPYDIYETD---EIKFRIHSIDYPAIPVDQQPNESNSKFQMEEQPKENVNVKPFAPMVVTAT
LGFF+DIYVP L+P P+ +PDP N + WVW+Y G+P + Y D +IKFR+ SI YP++P ++ + KPFAPMVVT
Subjt: LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQPYDIYETD---EIKFRIHSIDYPAIPVDQQPNESNSKFQMEEQPKENVNVKPFAPMVVTAT
Query: IDYDGLGPVSWWDGSGDADAE
+D DGLGPVSWWD D E
Subjt: IDYDGLGPVSWWDGSGDADAE
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| AT1G06790.2 RNA polymerase Rpb7 N-terminal domain-containing protein | 1.1e-58 | 53.5 | Show/hide |
Query: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
MFYLS +EH+LRVPP +L+LP+ DAIK L+ +FLDKV+A LGLC+S+YDI+SV+GGF+ P DGAATYKV ++VFRP+ GE+I K KESDANGLR++
Subjt: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
Query: LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQPYDIYETD---EIKFRIHSIDYPAIPVDQQPNESNSKFQMEEQPKENVNVKPFAPMVVTAT
LGFF+DIYVP L+P P+ +PDP N + WVW+Y G+P + Y D +IKFR+ SI YP++P ++ + KPFAPMVVT +
Subjt: LGFFEDIYVPIHLLPSPSEFKPDPKNGGKRRWVWDYDGQPYDIYETD---EIKFRIHSIDYPAIPVDQQPNESNSKFQMEEQPKENVNVKPFAPMVVTAT
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| AT4G14660.1 RNA polymerase Rpb7-like, N-terminal domain | 9.9e-04 | 29.35 | Show/hide |
Query: AIKGELEKLFLDKVVAK-LGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRISLGFFEDIYVPIHLLP
AI EL + F K K LG ++V + + G I G + V+F+ + F+ + GEII G V + +G+ + G E++Y+ +P
Subjt: AIKGELEKLFLDKVVAK-LGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRISLGFFEDIYVPIHLLP
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| AT5G59180.1 DNA-directed RNA polymerase II | 1.8e-05 | 25.4 | Show/hide |
Query: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
MF+ +E +++ P + + + +L K + G +++ I ++ G I G T+ V + +VFRP+ GEI+ V L
Subjt: MFYLSRIEHTLRVPPSMLHLPILDAIKGELEKLFLDKVVAKLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPYAGEIIIGKVKESDANGLRIS
Query: LGFFED-----IYVPIHLLPSPSEFK
+GFF + I+V HL+P EF+
Subjt: LGFFED-----IYVPIHLLPSPSEFK
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