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Carg07141 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07141
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionzinc finger protein 6-like
Genome locationCarg_Chr17:7992409..7992849
RNA-Seq ExpressionCarg07141
SyntenyCarg07141
Gene Ontology termsGO:0009736 - cytokinin-activated signaling pathway (biological process)
GO:0009740 - gibberellic acid mediated signaling pathway (biological process)
GO:0010090 - trichome morphogenesis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily
IPR044299 - Zinc finger protein GIS3/ZFP5/ZFP6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575791.1 Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. sororia]4.8e-78100Show/hide
Query:  MSILKLFGFPLVEHDGVQPETAEGGGGDINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHALRPPPLYTGSSGGSRILPPSRNGYFS
        MSILKLFGFPLVEHDGVQPETAEGGGGDINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHALRPPPLYTGSSGGSRILPPSRNGYFS
Subjt:  MSILKLFGFPLVEHDGVQPETAEGGGGDINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHALRPPPLYTGSSGGSRILPPSRNGYFS

Query:  AAYSGVSASSRRRMFGKMESLGCKLDGEKGLPNHVGAVDLHLKLTL
        AAYSGVSASSRRRMFGKMESLGCKLDGEKGLPNHVGAVDLHLKLTL
Subjt:  AAYSGVSASSRRRMFGKMESLGCKLDGEKGLPNHVGAVDLHLKLTL

XP_022991778.1 zinc finger protein 6-like [Cucurbita maxima]4.5e-6888.24Show/hide
Query:  MSILKLFGFPLVEHDGVQPETAEGGGGDINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHALRPPPLYT-------GSSGGSRILPP
        MSILKLFGFPLVEH+GVQPET EG GGDINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHALRPPPLYT       GSSG SRILP 
Subjt:  MSILKLFGFPLVEHDGVQPETAEGGGGDINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHALRPPPLYT-------GSSGGSRILPP

Query:  SRNGYFSAAYSGVSASSRRRMFGKMESLGCKLDGEKGLPNHVGAVDLHLKLTL
        SRN YF+AAY GVSASS R MFGKMES GCKLDGEKGLPNHVGAVDLHLKLTL
Subjt:  SRNGYFSAAYSGVSASSRRRMFGKMESLGCKLDGEKGLPNHVGAVDLHLKLTL

XP_023522572.1 zinc finger protein GIS-like [Cucurbita pepo subsp. pepo]6.7e-7293.92Show/hide
Query:  MSILKLFGFPLVEHDGVQPETAEGGGGDINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHALRPPPLYT--GSSGGSRILPPSRNGY
        MSILKLFGFPLVEHDGVQPET EGGGGDINSD DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHALRPPPLYT  GSSGGSRILPPSRNGY
Subjt:  MSILKLFGFPLVEHDGVQPETAEGGGGDINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHALRPPPLYT--GSSGGSRILPPSRNGY

Query:  FSAAYSGVSASSRRRMFGKMESLGCKLDGEKGLPNHVGAVDLHLKLTL
        F+AAY GVSASS R MFGKMES GCKLDGEKGLPNHVGAVDLHLKLTL
Subjt:  FSAAYSGVSASSRRRMFGKMESLGCKLDGEKGLPNHVGAVDLHLKLTL

XP_023549128.1 zinc finger protein GIS-like [Cucurbita pepo subsp. pepo]6.1e-6593.38Show/hide
Query:  MSILKLFGFPLVEHDGVQPETAEGGGGDINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHALRPPPLYT--GSSGGSRILPPSRNGY
        MSILKLFGFPLVEHDGVQPET EGGGGDINSD DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHALRPPPLYT  GSSGGSRILPPSRNGY
Subjt:  MSILKLFGFPLVEHDGVQPETAEGGGGDINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHALRPPPLYT--GSSGGSRILPPSRNGY

Query:  FSAAYSGVSASSRRRMFGKMESLGCKLDGEKGLPNH
        F+AAY GVSASS R MFGKMES GCKLDGEKGLPNH
Subjt:  FSAAYSGVSASSRRRMFGKMESLGCKLDGEKGLPNH

XP_023549396.1 zinc finger protein GIS-like [Cucurbita pepo subsp. pepo]9.4e-6694.12Show/hide
Query:  MSILKLFGFPLVEHDGVQPETAEGGGGDINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHALRPPPLYT--GSSGGSRILPPSRNGY
        MSILKLFGFPLVEHDGVQPET EGGGGDINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHALRPPPLYT  GSSGGSRILPPSRNGY
Subjt:  MSILKLFGFPLVEHDGVQPETAEGGGGDINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHALRPPPLYT--GSSGGSRILPPSRNGY

Query:  FSAAYSGVSASSRRRMFGKMESLGCKLDGEKGLPNH
        F+AAY GVSASS R MFGKMES GCKLDGEKGLPNH
Subjt:  FSAAYSGVSASSRRRMFGKMESLGCKLDGEKGLPNH

TrEMBL top hitse value%identityAlignment
A0A0A0K5R1 C2H2-type domain-containing protein7.1e-4366.67Show/hide
Query:  SILKLFGFPLVEHDGVQPETAEGGGG--DINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH--ALRPPPLYT--------GSSGGSR
        SILKLFGFPLVEHD   PET +G GG     S+DDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH  ALRPP LY+        G  G SR
Subjt:  SILKLFGFPLVEHDGVQPETAEGGGG--DINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH--ALRPPPLYT--------GSSGGSR

Query:  ILPPSR--NGYF--SAAYSGVSASSRRRMF-----GKMESLGCKLDGEKGLPNHVGAVDLHLKLT
        IL  +   NGYF  +AAY GVSASS R MF     G ME+ GCKL GEKGL      VDLHLKL+
Subjt:  ILPPSR--NGYF--SAAYSGVSASSRRRMF-----GKMESLGCKLDGEKGLPNHVGAVDLHLKLT

A0A1S3BSU1 zinc finger protein 6-like9.5e-4869.46Show/hide
Query:  SILKLFGFPLVEHDGVQPETAEGGGG----DINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH--ALRPPPLYT----------GSS
        SILKLFGFPLVEHD   PET +G GG     INSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH  ALRPP LY+          G  
Subjt:  SILKLFGFPLVEHDGVQPETAEGGGG----DINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH--ALRPPPLYT----------GSS

Query:  GGSRILPPSRNGYF--SAAYSGVSASSRRRMF-----GKMESLGCKLDGEKGLPNHVGAVDLHLKLT
        GGSRILP + NGYF  +AAY GVSASS R MF     GKME+ GCKL GEKGL      VDLHLKL+
Subjt:  GGSRILPPSRNGYF--SAAYSGVSASSRRRMF-----GKMESLGCKLDGEKGLPNHVGAVDLHLKLT

A0A5D3D1T3 Zinc finger protein 6-like2.1e-4768.24Show/hide
Query:  SILKLFGFPLVEHDGVQPETAEGGGG----DINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH--ALRPPPLYT-------------
        SILKLFGFPLVEHD   PET +G GG     INSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH  ALRPP LY+             
Subjt:  SILKLFGFPLVEHDGVQPETAEGGGG----DINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH--ALRPPPLYT-------------

Query:  GSSGGSRILPPSRNGYF--SAAYSGVSASSRRRMF-----GKMESLGCKLDGEKGLPNHVGAVDLHLKLT
        G  GGSRILP + NGYF  +AAY GVSASS R MF     GKME+ GCKL GEKGL      VDLHLKL+
Subjt:  GSSGGSRILPPSRNGYF--SAAYSGVSASSRRRMF-----GKMESLGCKLDGEKGLPNHVGAVDLHLKLT

A0A6J1JX90 zinc finger protein 6-like2.2e-6888.24Show/hide
Query:  MSILKLFGFPLVEHDGVQPETAEGGGGDINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHALRPPPLYT-------GSSGGSRILPP
        MSILKLFGFPLVEH+GVQPET EG GGDINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHALRPPPLYT       GSSG SRILP 
Subjt:  MSILKLFGFPLVEHDGVQPETAEGGGGDINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHALRPPPLYT-------GSSGGSRILPP

Query:  SRNGYFSAAYSGVSASSRRRMFGKMESLGCKLDGEKGLPNHVGAVDLHLKLTL
        SRN YF+AAY GVSASS R MFGKMES GCKLDGEKGLPNHVGAVDLHLKLTL
Subjt:  SRNGYFSAAYSGVSASSRRRMFGKMESLGCKLDGEKGLPNHVGAVDLHLKLTL

A0A6J1KTC7 zinc finger protein GIS3-like2.7e-4262.58Show/hide
Query:  SILKLFGFPLVEHDGVQPETAEGGGG-DINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH--------ALRPPPLYT----------
        +ILKLFGFPLVEHD + P T +GGGG D NSD DRKFRCQFC RVFANSQALGGHQNAHKRERQRAKRALYFH        ALRPPP Y+          
Subjt:  SILKLFGFPLVEHDGVQPETAEGGGG-DINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH--------ALRPPPLYT----------

Query:  GSSGGSRILPPSRNGYFSAAYSGVSASSRRRMFGKMESLGCKLDGEKGLPNHVGAVDLHLKLT
        G   G R LP S +GYF+AAY GVSA S R MFG          GEKG  + V  VDLHLKL+
Subjt:  GSSGGSRILPPSRNGYFSAAYSGVSASSRRRMFGKMESLGCKLDGEKGLPNHVGAVDLHLKLT

SwissProt top hitse value%identityAlignment
Q39265 Zinc finger protein 65.1e-1457.35Show/hide
Query:  SILKLFGFPLVEHDGVQPETAEGGGGDINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA
        S LKLFG  L+E   VQ +++E   G  +  + RK+ CQ+C R FANSQALGGHQNAHK+ERQ  KRA
Subjt:  SILKLFGFPLVEHDGVQPETAEGGGGDINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA

Q39266 Zinc finger protein 71.9e-0857.89Show/hide
Query:  RKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALY----FHALRPPPLYTGSSGG
        R F C +CRR F +SQALGGHQNAHKRER  AKRA++    F     P  YT SS G
Subjt:  RKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALY----FHALRPPPLYTGSSGG

Q84WI0 Zinc finger protein GIS3.8e-0935.88Show/hide
Query:  EHDGVQPETAEGGGGDINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAL---YFHALRPPPLYTGSSGGSRILPPSRNGYFSAA--YSGVS
        E +  + +T +    + +   +R+F C +C R F  SQALGGHQNAHKRERQ AKR +   ++H    P  Y       R  P   NG  +AA  Y G S
Subjt:  EHDGVQPETAEGGGGDINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAL---YFHALRPPPLYTGSSGGSRILPPSRNGYFSAA--YSGVS

Query:  ASSRRRMFGKMESLGCKLDGEKGLPNHVGAV
        +  +   +    S G +L G   LP  V  V
Subjt:  ASSRRRMFGKMESLGCKLDGEKGLPNHVGAV

Q9C9H1 Zinc finger protein GIS34.5e-1059.26Show/hide
Query:  GVQPETAEGGGGDINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA
        GV+     GGGG      +RK+ CQ+C R F NSQALGGHQNAHK+ERQ+ KRA
Subjt:  GVQPETAEGGGGDINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA

Q9FG05 Zinc finger protein GIS21.9e-0841.25Show/hide
Query:  LKLFGFPL-VEHDGVQPETAEGGGGDINSDD--DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR-------ALYFH
        ++LFGF     H+  + +       +   DD  +++F+C +C R F  SQALGGHQNAHKRERQ+ KR       A +FH
Subjt:  LKLFGFPL-VEHDGVQPETAEGGGGDINSDD--DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR-------ALYFH

Arabidopsis top hitse value%identityAlignment
AT1G24625.1 zinc finger protein 71.3e-0957.89Show/hide
Query:  RKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALY----FHALRPPPLYTGSSGG
        R F C +CRR F +SQALGGHQNAHKRER  AKRA++    F     P  YT SS G
Subjt:  RKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALY----FHALRPPPLYTGSSGG

AT1G67030.1 zinc finger protein 63.6e-1557.35Show/hide
Query:  SILKLFGFPLVEHDGVQPETAEGGGGDINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA
        S LKLFG  L+E   VQ +++E   G  +  + RK+ CQ+C R FANSQALGGHQNAHK+ERQ  KRA
Subjt:  SILKLFGFPLVEHDGVQPETAEGGGGDINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA

AT1G68360.1 C2H2 and C2HC zinc fingers superfamily protein3.2e-1159.26Show/hide
Query:  GVQPETAEGGGGDINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA
        GV+     GGGG      +RK+ CQ+C R F NSQALGGHQNAHK+ERQ+ KRA
Subjt:  GVQPETAEGGGGDINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA

AT3G58070.1 C2H2 and C2HC zinc fingers superfamily protein2.7e-1035.88Show/hide
Query:  EHDGVQPETAEGGGGDINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAL---YFHALRPPPLYTGSSGGSRILPPSRNGYFSAA--YSGVS
        E +  + +T +    + +   +R+F C +C R F  SQALGGHQNAHKRERQ AKR +   ++H    P  Y       R  P   NG  +AA  Y G S
Subjt:  EHDGVQPETAEGGGGDINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAL---YFHALRPPPLYTGSSGGSRILPPSRNGYFSAA--YSGVS

Query:  ASSRRRMFGKMESLGCKLDGEKGLPNHVGAV
        +  +   +    S G +L G   LP  V  V
Subjt:  ASSRRRMFGKMESLGCKLDGEKGLPNHVGAV

AT5G06650.1 C2H2 and C2HC zinc fingers superfamily protein1.3e-0941.25Show/hide
Query:  LKLFGFPL-VEHDGVQPETAEGGGGDINSDD--DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR-------ALYFH
        ++LFGF     H+  + +       +   DD  +++F+C +C R F  SQALGGHQNAHKRERQ+ KR       A +FH
Subjt:  LKLFGFPL-VEHDGVQPETAEGGGGDINSDD--DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR-------ALYFH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATTCTCAAGCTATTCGGGTTCCCACTCGTCGAGCACGACGGCGTTCAACCGGAAACCGCCGAAGGGGGTGGCGGCGATATCAACTCCGACGACGACAGAAAGTT
CCGCTGTCAATTCTGCCGCCGAGTATTTGCCAATTCGCAGGCCCTCGGCGGCCACCAGAATGCCCACAAGAGAGAGCGCCAAAGGGCCAAACGCGCCCTTTATTTCCACG
CACTCCGACCGCCGCCGCTTTACACTGGCAGTAGTGGTGGTTCTAGAATTCTGCCACCGAGCCGCAACGGGTACTTTTCGGCGGCGTACAGCGGCGTATCGGCGTCATCA
CGGCGGCGGATGTTCGGAAAAATGGAATCTTTAGGGTGTAAATTGGATGGTGAAAAGGGATTACCAAATCATGTGGGTGCTGTTGATCTTCATCTTAAATTAACTTTATG
A
mRNA sequenceShow/hide mRNA sequence
ATGTCCATTCTCAAGCTATTCGGGTTCCCACTCGTCGAGCACGACGGCGTTCAACCGGAAACCGCCGAAGGGGGTGGCGGCGATATCAACTCCGACGACGACAGAAAGTT
CCGCTGTCAATTCTGCCGCCGAGTATTTGCCAATTCGCAGGCCCTCGGCGGCCACCAGAATGCCCACAAGAGAGAGCGCCAAAGGGCCAAACGCGCCCTTTATTTCCACG
CACTCCGACCGCCGCCGCTTTACACTGGCAGTAGTGGTGGTTCTAGAATTCTGCCACCGAGCCGCAACGGGTACTTTTCGGCGGCGTACAGCGGCGTATCGGCGTCATCA
CGGCGGCGGATGTTCGGAAAAATGGAATCTTTAGGGTGTAAATTGGATGGTGAAAAGGGATTACCAAATCATGTGGGTGCTGTTGATCTTCATCTTAAATTAACTTTATG
A
Protein sequenceShow/hide protein sequence
MSILKLFGFPLVEHDGVQPETAEGGGGDINSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHALRPPPLYTGSSGGSRILPPSRNGYFSAAYSGVSASS
RRRMFGKMESLGCKLDGEKGLPNHVGAVDLHLKLTL