; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg07172 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07172
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionserine/arginine-rich-splicing factor SR34-like
Genome locationCarg_Chr17:8118995..8122511
RNA-Seq ExpressionCarg07172
SyntenyCarg07172
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067995.1 serine/arginine-rich-splicing factor SR34-like isoform X1 [Cucumis melo var. makuwa]9.2e-15496.04Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHG SR
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
        GGRGVSRRSD+RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSR+YVRVREYDSKRD S+SPSRG
Subjt:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG

Query:  RSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSGWAALKTFWYLYSNAFSNAMSMGARFGSKKIMDCNNRAGYL
        RSYSRGRSYSRSRSRGRSRSKS SRSKSPK KSSQRSPVKSRSRSASPARSRSKSSSLSGWAA KTFWYL SNAFSNAMSMGAR GSK+IMDCNNRAGYL
Subjt:  RSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSGWAALKTFWYLYSNAFSNAMSMGARFGSKKIMDCNNRAGYL

Query:  ELS
        EL+
Subjt:  ELS

KAG6575826.1 Serine/arginine-rich-splicing factor SR34, partial [Cucurbita argyrosperma subsp. sororia]1.1e-133100Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
        GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
Subjt:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG

Query:  RSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG
        RSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG
Subjt:  RSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG

KAG7014363.1 Serine/arginine-rich-splicing factor SR34, partial [Cucurbita argyrosperma subsp. argyrosperma]6.8e-173100Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
        GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
Subjt:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG

Query:  RSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSGWAALKTFWYLYSNAFSNAMSMGARFGSKKIMDCNNRAGYL
        RSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSGWAALKTFWYLYSNAFSNAMSMGARFGSKKIMDCNNRAGYL
Subjt:  RSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSGWAALKTFWYLYSNAFSNAMSMGARFGSKKIMDCNNRAGYL

Query:  ELSAIWTWKSSSLSFTFSAARFAKL
        ELSAIWTWKSSSLSFTFSAARFAKL
Subjt:  ELSAIWTWKSSSLSFTFSAARFAKL

XP_022991236.1 serine/arginine-rich-splicing factor SR34-like [Cucurbita maxima]4.0e-13399.62Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
        GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
Subjt:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG

Query:  RSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG
        RSYSRGRSYSRS SRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG
Subjt:  RSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG

XP_023547992.1 serine/arginine-rich-splicing factor SR34-like [Cucurbita pepo subsp. pepo]2.3e-13399.62Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
        GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
Subjt:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG

Query:  RSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG
        RSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSS+LSG
Subjt:  RSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG

TrEMBL top hitse value%identityAlignment
A0A5D3D2K1 Serine/arginine-rich-splicing factor SR34-like isoform X14.4e-15496.04Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHG SR
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
        GGRGVSRRSD+RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSR+YVRVREYDSKRD S+SPSRG
Subjt:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG

Query:  RSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSGWAALKTFWYLYSNAFSNAMSMGARFGSKKIMDCNNRAGYL
        RSYSRGRSYSRSRSRGRSRSKS SRSKSPK KSSQRSPVKSRSRSASPARSRSKSSSLSGWAA KTFWYL SNAFSNAMSMGAR GSK+IMDCNNRAGYL
Subjt:  RSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSGWAALKTFWYLYSNAFSNAMSMGARFGSKKIMDCNNRAGYL

Query:  ELS
        EL+
Subjt:  ELS

A0A6J1D3F5 serine/arginine-rich-splicing factor SR34-like isoform X16.9e-13197.69Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHG SR
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
        GGRGVSRRSD+RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRD S+SPSRG
Subjt:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG

Query:  RSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG
        RS+SRGRSYSRSRSRGRSRSKSRSRSKSPK KSSQRSPVKSRSRSASPARSRSKSSSLSG
Subjt:  RSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG

A0A6J1GP36 serine/arginine-rich-splicing factor SR34-like isoform X12.5e-13399.62Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAI GRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
        GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
Subjt:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG

Query:  RSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG
        RSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG
Subjt:  RSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG

A0A6J1GQG9 serine/arginine-rich-splicing factor SR34-like isoform X22.5e-13399.62Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAI GRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
        GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
Subjt:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG

Query:  RSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG
        RSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG
Subjt:  RSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG

A0A6J1JQ69 serine/arginine-rich-splicing factor SR34-like1.9e-13399.62Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
        GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
Subjt:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG

Query:  RSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG
        RSYSRGRSYSRS SRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG
Subjt:  RSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG

SwissProt top hitse value%identityAlignment
A2RVS6 Serine/arginine-rich splicing factor SR34A6.7e-8364.81Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDR--YSSHGS
        MS R SR++YVGNLPGDIRE E+ED+FYKYGRI  I+LKVPPRPP Y FVEFE + DA+DAI+GRDGY+ DG RLRVELAHGGRG SSS  R  Y   GS
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDR--YSSHGS

Query:  SRGGR---------GVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDS
          GG          GVSR S+FRV+V GLPSSASWQDLKDHMR+AGDVCF++V RD  GT G+VDYTNYDDMKYAI+KLDD+EFRN ++R ++RV++Y+S
Subjt:  SRGGR---------GVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDS

Query:  KRDSSKSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLS
         R  S+SPSR RS SR RS SR R R  SRS+S SRSKSP+ K   +SP +S SRS S +RS S     S
Subjt:  KRDSSKSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLS

F4JHI7 Serine/arginine-rich splicing factor SR34B1.3e-9471.43Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSR+SRT+YVGNLPGDIRE+EVEDLF KYG +  IDLK+PPRPPGYAFVEFEDA DA DAI GRDGYDFDGH LRVELAHGGR  SS   R S  G  R
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GG----------RGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSK
        GG          RG SRRS++RV+V+GLPSSASWQDLKDHMR+ G+VCFSQVFRDG GTTGIVDYT+Y+DMKYA   LDD+EFRNAFS  YVRVREYDS+
Subjt:  GG----------RGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSK

Query:  RDSSKSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLS--GWAALKTFW
        RD S+SPSRGRSYS+ RS  RS SR RSRS+SRS+S+SPK KS +RSP KS SRS   +RSRSKS SLS  GW  ++  W
Subjt:  RDSSKSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLS--GWAALKTFW

O22315 Serine/arginine-rich-splicing factor SR349.7e-9873.45Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSR+SRTVYVGNLPGDIRE+EVEDLF KYG +  IDLKVPPRPPGYAFVEF+DA DA+DAI GRDGYDFDGHRLRVELAHGGR  SS   R S +G  R
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GG---------RGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKR
        GG         RG SRRS+FRVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD  GTTG+VDYT Y+DMKYA+KKLDD+EFRNAFS  YVRVREYDS++
Subjt:  GG---------RGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKR

Query:  DSSKSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVK---------SRSRSASPARSRSKSSS
        D S+SPSRGRSYS+ RS SR RS  RSRS+SRSRS+SPK KSS+RSP K         S+SRS SP RSRS+S S
Subjt:  DSSKSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVK---------SRSRSASPARSRSKSSS

Q6NYA0 Serine/arginine-rich splicing factor 1B5.0e-5455.65Show/hide
Query:  VYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSRGGRG-VSR
        +YVGNLP DIR K+VED+FYKYG I  IDLK     P +AFVEFED  DA+DA+ GRDGYD+DG+RLRVE    GRG           G+ RG  G  SR
Subjt:  VYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSRGGRG-VSR

Query:  RSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFR-NAFSRSYVRVREYDSKRDSSKSPSRGRSYSRG
        RS++RV+V+GLP S SWQDLKDHMR AGDVC++ VFRDG   TG+V++   +DM YA++KLD+++FR +    +Y+RV     K D  +SPS GRS SR 
Subjt:  RSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFR-NAFSRSYVRVREYDSKRDSSKSPSRGRSYSRG

Query:  RSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRS
        RS SRSRS  RSRS S  RS+     S + SP  SRSRS
Subjt:  RSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRS

Q9XFR5 Serine/arginine-rich splicing factor SR302.4e-8068.85Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSR +RT+YVGNLPGDIR+ EVEDLFYKYG I  IDLK+PPRPPGYAFVEFED  DA DAI GRDGYDFDG RLRVE+AHGGR  S S DRYSS  S  
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
          R  SRRSD+RVLVTGLP SASWQDLKDHMR+AGDVCFS+VF D  G +G+VDY+NYDDMKYAI+KLD +EFRNAFS +Y+RVREY+S R  S+SP   
Subjt:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG

Query:  RSYSRGRSYSRSRSRGRSRS-KSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLS
        +SY      SRSRSRG S S  S+SRS SP    S RS   SRSRS   + SRS+S S S
Subjt:  RSYSRGRSYSRSRSRGRSRS-KSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLS

Arabidopsis top hitse value%identityAlignment
AT1G02840.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.9e-9973.45Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSR+SRTVYVGNLPGDIRE+EVEDLF KYG +  IDLKVPPRPPGYAFVEF+DA DA+DAI GRDGYDFDGHRLRVELAHGGR  SS   R S +G  R
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GG---------RGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKR
        GG         RG SRRS+FRVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD  GTTG+VDYT Y+DMKYA+KKLDD+EFRNAFS  YVRVREYDS++
Subjt:  GG---------RGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKR

Query:  DSSKSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVK---------SRSRSASPARSRSKSSS
        D S+SPSRGRSYS+ RS SR RS  RSRS+SRSRS+SPK KSS+RSP K         S+SRS SP RSRS+S S
Subjt:  DSSKSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVK---------SRSRSASPARSRSKSSS

AT1G02840.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.1e-10071.93Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSR+SRTVYVGNLPGDIRE+EVEDLF KYG +  IDLKVPPRPPGYAFVEF+DA DA+DAI GRDGYDFDGHRLRVELAHGGR  SS   R S +G  R
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GG---------RGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKR
        GG         RG SRRS+FRVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD  GTTG+VDYT Y+DMKYA+KKLDD+EFRNAFS  YVRVREYDS++
Subjt:  GG---------RGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKR

Query:  DSSKSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSGWAALKTFWYLYSNAFS
        D S+SPSRGRSYS+ RS SR RS  RSRS+SRSRS+SPK KSS+RSP KS SRS  P RS+S+S S   W  ++T  +L  N  S
Subjt:  DSSKSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSGWAALKTFWYLYSNAFS

AT1G02840.3 RNA-binding (RRM/RBD/RNP motifs) family protein6.9e-9973.45Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSR+SRTVYVGNLPGDIRE+EVEDLF KYG +  IDLKVPPRPPGYAFVEF+DA DA+DAI GRDGYDFDGHRLRVELAHGGR  SS   R S +G  R
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GG---------RGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKR
        GG         RG SRRS+FRVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD  GTTG+VDYT Y+DMKYA+KKLDD+EFRNAFS  YVRVREYDS++
Subjt:  GG---------RGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKR

Query:  DSSKSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVK---------SRSRSASPARSRSKSSS
        D S+SPSRGRSYS+ RS SR RS  RSRS+SRSRS+SPK KSS+RSP K         S+SRS SP RSRS+S S
Subjt:  DSSKSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVK---------SRSRSASPARSRSKSSS

AT3G49430.1 SER/ARG-rich protein 34A4.8e-8464.81Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDR--YSSHGS
        MS R SR++YVGNLPGDIRE E+ED+FYKYGRI  I+LKVPPRPP Y FVEFE + DA+DAI+GRDGY+ DG RLRVELAHGGRG SSS  R  Y   GS
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDR--YSSHGS

Query:  SRGGR---------GVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDS
          GG          GVSR S+FRV+V GLPSSASWQDLKDHMR+AGDVCF++V RD  GT G+VDYTNYDDMKYAI+KLDD+EFRN ++R ++RV++Y+S
Subjt:  SRGGR---------GVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDS

Query:  KRDSSKSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLS
         R  S+SPSR RS SR RS SR R R  SRS+S SRSKSP+ K   +SP +S SRS S +RS S     S
Subjt:  KRDSSKSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLS

AT4G02430.2 RNA-binding (RRM/RBD/RNP motifs) family protein9.3e-9671.43Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSR+SRT+YVGNLPGDIRE+EVEDLF KYG +  IDLK+PPRPPGYAFVEFEDA DA DAI GRDGYDFDGH LRVELAHGGR  SS   R S  G  R
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GG----------RGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSK
        GG          RG SRRS++RV+V+GLPSSASWQDLKDHMR+ G+VCFSQVFRDG GTTGIVDYT+Y+DMKYA   LDD+EFRNAFS  YVRVREYDS+
Subjt:  GG----------RGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSK

Query:  RDSSKSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLS--GWAALKTFW
        RD S+SPSRGRSYS+ RS  RS SR RSRS+SRS+S+SPK KS +RSP KS SRS   +RSRSKS SLS  GW  ++  W
Subjt:  RDSSKSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLS--GWAALKTFW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAGCCGTGCCAGCAGAACAGTCTATGTTGGCAATCTCCCGGGTGATATTCGTGAAAAAGAAGTGGAAGATTTATTTTACAAGTATGGTCGCATAGCCCACATTGA
TCTCAAGGTTCCACCAAGGCCTCCTGGTTATGCATTTGTTGAGTTCGAAGATGCGGAAGATGCTCAAGATGCAATTCGTGGTCGCGATGGCTATGATTTTGATGGCCATA
GGTTGCGTGTGGAACTTGCTCATGGTGGTCGTGGTCATTCATCATCTAGTGATCGTTATAGTAGTCATGGAAGCAGCCGAGGTGGGCGTGGAGTATCTCGACGTTCTGAT
TTTCGTGTATTAGTCACAGGATTACCTTCTTCTGCTTCGTGGCAAGACTTAAAGGATCACATGCGGCGAGCTGGGGATGTTTGTTTCTCCCAAGTGTTCCGTGATGGTAG
TGGAACCACAGGGATTGTGGATTACACCAACTATGATGACATGAAGTATGCAATTAAAAAACTGGATGACTCTGAGTTCCGTAATGCATTTTCCCGGTCTTATGTTCGTG
TGAGGGAATATGATTCAAAGAGAGATTCATCCAAGAGTCCTAGTCGTGGGCGGTCATACTCTAGAGGGCGGAGTTATAGTCGCAGTCGCAGTAGAGGTCGAAGTAGGAGC
AAGAGTCGCAGTAGGAGCAAGTCTCCTAAGGGTAAATCTTCCCAGCGGTCACCTGTAAAATCCCGATCAAGGTCTGCTTCCCCTGCTCGGTCACGATCAAAGTCATCATC
TCTTTCAGGATGGGCAGCTTTGAAAACCTTCTGGTACCTCTATTCTAATGCTTTTAGCAATGCAATGTCCATGGGTGCTAGATTTGGATCCAAGAAGATCATGGATTGCA
ATAATAGAGCTGGATATCTTGAACTAAGTGCTATTTGGACTTGGAAGTCATCATCACTTTCATTTACATTTTCTGCTGCAAGATTTGCCAAGCTATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCAGCCGTGCCAGCAGAACAGTCTATGTTGGCAATCTCCCGGGTGATATTCGTGAAAAAGAAGTGGAAGATTTATTTTACAAGTATGGTCGCATAGCCCACATTGA
TCTCAAGGTTCCACCAAGGCCTCCTGGTTATGCATTTGTTGAGTTCGAAGATGCGGAAGATGCTCAAGATGCAATTCGTGGTCGCGATGGCTATGATTTTGATGGCCATA
GGTTGCGTGTGGAACTTGCTCATGGTGGTCGTGGTCATTCATCATCTAGTGATCGTTATAGTAGTCATGGAAGCAGCCGAGGTGGGCGTGGAGTATCTCGACGTTCTGAT
TTTCGTGTATTAGTCACAGGATTACCTTCTTCTGCTTCGTGGCAAGACTTAAAGGATCACATGCGGCGAGCTGGGGATGTTTGTTTCTCCCAAGTGTTCCGTGATGGTAG
TGGAACCACAGGGATTGTGGATTACACCAACTATGATGACATGAAGTATGCAATTAAAAAACTGGATGACTCTGAGTTCCGTAATGCATTTTCCCGGTCTTATGTTCGTG
TGAGGGAATATGATTCAAAGAGAGATTCATCCAAGAGTCCTAGTCGTGGGCGGTCATACTCTAGAGGGCGGAGTTATAGTCGCAGTCGCAGTAGAGGTCGAAGTAGGAGC
AAGAGTCGCAGTAGGAGCAAGTCTCCTAAGGGTAAATCTTCCCAGCGGTCACCTGTAAAATCCCGATCAAGGTCTGCTTCCCCTGCTCGGTCACGATCAAAGTCATCATC
TCTTTCAGGATGGGCAGCTTTGAAAACCTTCTGGTACCTCTATTCTAATGCTTTTAGCAATGCAATGTCCATGGGTGCTAGATTTGGATCCAAGAAGATCATGGATTGCA
ATAATAGAGCTGGATATCTTGAACTAAGTGCTATTTGGACTTGGAAGTCATCATCACTTTCATTTACATTTTCTGCTGCAAGATTTGCCAAGCTATAG
Protein sequenceShow/hide protein sequence
MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSRGGRGVSRRSD
FRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRGRSYSRGRSYSRSRSRGRSRS
KSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSGWAALKTFWYLYSNAFSNAMSMGARFGSKKIMDCNNRAGYLELSAIWTWKSSSLSFTFSAARFAKL