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Carg07183 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07183
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontranslocator protein homolog
Genome locationCarg_Chr17:8179949..8180500
RNA-Seq ExpressionCarg07183
SyntenyCarg07183
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004307 - TspO/MBR-related protein
IPR038330 - TspO/MBR-related superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575839.1 Translocator protein-like protein, partial [Cucurbita argyrosperma subsp. sororia]2.0e-8997.24Show/hide
Query:  MASTELKHRTTGDSPTVPAAAAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISS
        MASTELKHRTTGDSPTVPAAAAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISS
Subjt:  MASTELKHRTTGDSPTVPAAAAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISS

Query:  WLFWAEGGFQARPNALYLYTLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCWFGLFFL
        WLFWAEGGFQARPNALYLYTLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPC     FL
Subjt:  WLFWAEGGFQARPNALYLYTLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCWFGLFFL

KAG7014374.1 Translocator protein-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-95100Show/hide
Query:  MASTELKHRTTGDSPTVPAAAAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISS
        MASTELKHRTTGDSPTVPAAAAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISS
Subjt:  MASTELKHRTTGDSPTVPAAAAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISS

Query:  WLFWAEGGFQARPNALYLYTLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCWFGLFFLLS
        WLFWAEGGFQARPNALYLYTLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCWFGLFFLLS
Subjt:  WLFWAEGGFQARPNALYLYTLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCWFGLFFLLS

XP_022953735.1 translocator protein homolog [Cucurbita moschata]1.3e-8594.48Show/hide
Query:  MASTELKHRTTGDSPTVPAAAAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISS
        MASTELKHRTTGDSP VP   AAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISS
Subjt:  MASTELKHRTTGDSPTVPAAAAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISS

Query:  WLFWAEGGFQARPNALYLYTLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCWFGLFFL
        WLFWAEGGFQARPNALYLYTLYLVLCMAW+GLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPC     FL
Subjt:  WLFWAEGGFQARPNALYLYTLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCWFGLFFL

XP_022992488.1 translocator protein homolog [Cucurbita maxima]1.6e-8391.71Show/hide
Query:  MASTELKHRTTGDSPTVPAAAAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISS
        MASTELKHRTTGDSP VP   AAADEVS KR KNKAIAKRGLKSLAVAVSIPIAVTLLSILLL++PKNYYPSATKPFWVPSARVVNWGSLASSLLMGISS
Subjt:  MASTELKHRTTGDSPTVPAAAAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISS

Query:  WLFWAEGGFQARPNALYLYTLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCWFGLFFL
        WLFWAEGGFQA+PNALYLYTLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVN IAADLVRPC     FL
Subjt:  WLFWAEGGFQARPNALYLYTLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCWFGLFFL

XP_023548365.1 translocator protein homolog [Cucurbita pepo subsp. pepo]2.4e-8291.16Show/hide
Query:  MASTELKHRTTGDSPTVPAAAAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISS
        MASTELKHRTTGDSP    AA AADE SAKR KNKAIAKRGLKSLAVAVSIPIAVTLLSILLL+RPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISS
Subjt:  MASTELKHRTTGDSPTVPAAAAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISS

Query:  WLFWAEGGFQARPNALYLYTLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCWFGLFFL
        WLFWAEGGFQA+PNA+YLYTLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVN IAADLVRPC     FL
Subjt:  WLFWAEGGFQARPNALYLYTLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCWFGLFFL

TrEMBL top hitse value%identityAlignment
A0A0A0KAU9 Uncharacterized protein4.0e-5968.57Show/hide
Query:  MASTELKHRTTGDSPTVPAAAAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYP-SATKPFWVPSARVVNWGSLASSLLMGIS
        MAST+LKHR T DS T  +  +A D    K+ KNK IAKRGL+SLA+A+SIP+++TL  ILL +  KNYYP SA KPFWVPSA+VVNWGSL SSLLMG++
Subjt:  MASTELKHRTTGDSPTVPAAAAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYP-SATKPFWVPSARVVNWGSLASSLLMGIS

Query:  SWLFWAEGGFQARPNALYLYTLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPC
        +WL WAEGGF ARPNALYLY LY VLC+ WY L+ GAG+R L ++ACLGKTA LVGCDRLFRGVN +AADLV+PC
Subjt:  SWLFWAEGGFQARPNALYLYTLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPC

A0A5A7VJL5 Translocator protein-like protein1.7e-5768.18Show/hide
Query:  MASTELKHRTTGDSPTVPAAAAAAD-EVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYP-SATKPFWVPSARVVNWGSLASSLLMGI
        MAST+LKHR T DS   P +   AD     K+ +NK IAKRGL+SLA+A+SIP+++TLL I L +  KNYYP SA +PFWVPS +VVNWGSL SSLLMG+
Subjt:  MASTELKHRTTGDSPTVPAAAAAAD-EVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYP-SATKPFWVPSARVVNWGSLASSLLMGI

Query:  SSWLFWAEGGFQARPNALYLYTLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPC
        ++WL WAEGGF +RPNALYLY LYLVL +AWY LV GAG+R L S+ACLGKTA LVGCDRLFRGVN IAADLV+PC
Subjt:  SSWLFWAEGGFQARPNALYLYTLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPC

A0A6J1DBR2 translocator protein homolog2.0e-4759.12Show/hide
Query:  MASTELKHRTTGDSPTVPAAAAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISS
        MAS +LKHR   +S     A A A        K  A A+RGLKSLAVAVS+P++++LL++ LL+ P  + PS+ KPFW PSA  VN GS ASSLLMG + 
Subjt:  MASTELKHRTTGDSPTVPAAAAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISS

Query:  WLFWAEGGFQARPNALYLYTLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCWFGLFFL
        WL WA+GGF + PNALYLYTLY++LC  WYGL+LGAG+  L +VACL KTA LVGCDRLFR VN IAADLV+PC     FL
Subjt:  WLFWAEGGFQARPNALYLYTLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCWFGLFFL

A0A6J1GQH6 translocator protein homolog6.5e-8694.48Show/hide
Query:  MASTELKHRTTGDSPTVPAAAAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISS
        MASTELKHRTTGDSP VP   AAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISS
Subjt:  MASTELKHRTTGDSPTVPAAAAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISS

Query:  WLFWAEGGFQARPNALYLYTLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCWFGLFFL
        WLFWAEGGFQARPNALYLYTLYLVLCMAW+GLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPC     FL
Subjt:  WLFWAEGGFQARPNALYLYTLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCWFGLFFL

A0A6J1JZC9 translocator protein homolog7.9e-8491.71Show/hide
Query:  MASTELKHRTTGDSPTVPAAAAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISS
        MASTELKHRTTGDSP VP   AAADEVS KR KNKAIAKRGLKSLAVAVSIPIAVTLLSILLL++PKNYYPSATKPFWVPSARVVNWGSLASSLLMGISS
Subjt:  MASTELKHRTTGDSPTVPAAAAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISS

Query:  WLFWAEGGFQARPNALYLYTLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCWFGLFFL
        WLFWAEGGFQA+PNALYLYTLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVN IAADLVRPC     FL
Subjt:  WLFWAEGGFQARPNALYLYTLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCWFGLFFL

SwissProt top hitse value%identityAlignment
O82245 Translocator protein homolog1.0e-2738.55Show/hide
Query:  MASTELKHRTTGDSPTVPAAAA-----AADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLL
        M S ++++R   D      A A     +AD+   KR++ +A+AKRGLKSL VAV+ P+ VTL +   L     Y   A    W+P   +++   LASS L
Subjt:  MASTELKHRTTGDSPTVPAAAA-----AADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLL

Query:  MGISSWLFWAEGGFQARPNALYLYTLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPC
        MG+++WL W +GGF  +PNALYLY    +LC+ W  +    GS   G    LG++A L GC + F  ++ +A +LV+PC
Subjt:  MGISSWLFWAEGGFQARPNALYLYTLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPC

Arabidopsis top hitse value%identityAlignment
AT2G47770.1 TSPO(outer membrane tryptophan-rich sensory protein)-related7.2e-2938.55Show/hide
Query:  MASTELKHRTTGDSPTVPAAAA-----AADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLL
        M S ++++R   D      A A     +AD+   KR++ +A+AKRGLKSL VAV+ P+ VTL +   L     Y   A    W+P   +++   LASS L
Subjt:  MASTELKHRTTGDSPTVPAAAA-----AADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLL

Query:  MGISSWLFWAEGGFQARPNALYLYTLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPC
        MG+++WL W +GGF  +PNALYLY    +LC+ W  +    GS   G    LG++A L GC + F  ++ +A +LV+PC
Subjt:  MGISSWLFWAEGGFQARPNALYLYTLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCACCGAGCTCAAGCACCGAACAACAGGCGACTCCCCCACCGTCCCCGCCGCCGCCGCCGCCGCCGACGAGGTTAGCGCGAAGAGAGAGAAGAACAAGGCTAT
CGCCAAACGAGGCCTGAAGTCTCTAGCTGTGGCAGTCTCCATCCCCATCGCCGTCACTCTCCTCTCCATCCTCCTCCTTGCCAGACCCAAAAACTACTACCCCTCCGCCA
CGAAGCCCTTCTGGGTGCCATCGGCAAGGGTCGTGAATTGGGGGTCGTTGGCTTCTAGCTTGTTGATGGGCATCTCGAGCTGGCTGTTCTGGGCTGAAGGCGGGTTCCAA
GCTAGGCCCAACGCGCTGTATCTTTACACTTTGTACTTGGTGCTGTGCATGGCGTGGTACGGCCTCGTGCTTGGAGCCGGGTCGCGATGGCTAGGCTCGGTGGCGTGTTT
GGGGAAGACGGCGACGCTGGTTGGGTGTGACCGGTTGTTCCGAGGAGTGAACGCGATTGCGGCGGACTTGGTTAGGCCTTGTTGGTTTGGTCTGTTTTTCTTACTATCGT
GA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCACCGAGCTCAAGCACCGAACAACAGGCGACTCCCCCACCGTCCCCGCCGCCGCCGCCGCCGCCGACGAGGTTAGCGCGAAGAGAGAGAAGAACAAGGCTAT
CGCCAAACGAGGCCTGAAGTCTCTAGCTGTGGCAGTCTCCATCCCCATCGCCGTCACTCTCCTCTCCATCCTCCTCCTTGCCAGACCCAAAAACTACTACCCCTCCGCCA
CGAAGCCCTTCTGGGTGCCATCGGCAAGGGTCGTGAATTGGGGGTCGTTGGCTTCTAGCTTGTTGATGGGCATCTCGAGCTGGCTGTTCTGGGCTGAAGGCGGGTTCCAA
GCTAGGCCCAACGCGCTGTATCTTTACACTTTGTACTTGGTGCTGTGCATGGCGTGGTACGGCCTCGTGCTTGGAGCCGGGTCGCGATGGCTAGGCTCGGTGGCGTGTTT
GGGGAAGACGGCGACGCTGGTTGGGTGTGACCGGTTGTTCCGAGGAGTGAACGCGATTGCGGCGGACTTGGTTAGGCCTTGTTGGTTTGGTCTGTTTTTCTTACTATCGT
GA
Protein sequenceShow/hide protein sequence
MASTELKHRTTGDSPTVPAAAAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISSWLFWAEGGFQ
ARPNALYLYTLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCWFGLFFLLS