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Carg07202 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07202
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein no-on-transient A-like
Genome locationCarg_Chr17:8283028..8283348
RNA-Seq ExpressionCarg07202
SyntenyCarg07202
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046715.1 E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo var. makuwa]4.8e-1151.28Show/hide
Query:  MAALKSLVSVALLALLLFSESLTASAVDRSGDSNSLTGMLRRNVLQTAAHQIADNSVESSPERKMN-VHIK--RRMRPVATG-----TRSSAANRSRIAS
        MAA++ LVS+ALLALL FSESL          S+SLTG+  RN+L T AH+I + SVESS +RK N +H K  RR+RP+           SA NRSR+AS
Subjt:  MAALKSLVSVALLALLLFSESLTASAVDRSGDSNSLTGMLRRNVLQTAAHQIADNSVESSPERKMN-VHIK--RRMRPVATG-----TRSSAANRSRIAS

Query:  IGVGSVL---VVLGLFL
          VGS+L   + LGLFL
Subjt:  IGVGSVL---VVLGLFL

KAA0068047.1 protein no-on-transient A-like [Cucumis melo var. makuwa]8.2e-1960Show/hide
Query:  MAALKSLVSVALLALLLFSESLTASAVDRSGDSNSLTGMLRRNVLQTAAHQIADNSVESSPERKMNVHIKR----RMRPVA-----TGTRSSAANRSRIA
        MAA+KSL+ ++LLALL FSESL+ SA D  G SNS+TGMLRRNVLQTA H+IAD+      E KMNVHIKR    R+RPVA     TG R SAA+RS++A
Subjt:  MAALKSLVSVALLALLLFSESLTASAVDRSGDSNSLTGMLRRNVLQTAAHQIADNSVESSPERKMNVHIKR----RMRPVA-----TGTRSSAANRSRIA

Query:  SIGVGSVLVVLGLFL
        S G+G +L    LFL
Subjt:  SIGVGSVLVVLGLFL

KAG6575859.1 hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia]1.6e-43100Show/hide
Query:  MAALKSLVSVALLALLLFSESLTASAVDRSGDSNSLTGMLRRNVLQTAAHQIADNSVESSPERKMNVHIKRRMRPVATGTRSSAANRSRIASIGVGSVLV
        MAALKSLVSVALLALLLFSESLTASAVDRSGDSNSLTGMLRRNVLQTAAHQIADNSVESSPERKMNVHIKRRMRPVATGTRSSAANRSRIASIGVGSVLV
Subjt:  MAALKSLVSVALLALLLFSESLTASAVDRSGDSNSLTGMLRRNVLQTAAHQIADNSVESSPERKMNVHIKRRMRPVATGTRSSAANRSRIASIGVGSVLV

Query:  VLGLFL
        VLGLFL
Subjt:  VLGLFL

KAG6593163.1 hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sororia]9.4e-1557.89Show/hide
Query:  MAALKSLVSVALLALLLFSESLTASAVDRSGDSNSLTGMLRRNVLQTAA--HQIADNSVESSPERKMNVHIKR--RMRPVATG-TRSSAANRSRIASIGV
        MAA+K+L+S+AL+ALLLF ESL  SA    G S SL G+LRRN++QT A  HQ+A        E+K NVHIKR  RMRPV  G  ++SAANRSR A  GV
Subjt:  MAALKSLVSVALLALLLFSESLTASAVDRSGDSNSLTGMLRRNVLQTAA--HQIADNSVESSPERKMNVHIKR--RMRPVATG-TRSSAANRSRIASIGV

Query:  GSVL---VVLGLFL
        GS+L   V+LGLFL
Subjt:  GSVL---VVLGLFL

KGN44886.1 hypothetical protein Csa_015765 [Cucumis sativus]3.1e-1857.89Show/hide
Query:  MAALKSLVSVALLALLLFSESLTASAVDRSGDSNSLTGMLRRNVLQTAAHQIADNSVESSPERKMNVHIKR----RMRPV----ATGTRSSAANRSRIAS
        MAA+KSL+S++LLALL FSESL+ SA +  G SNS+T MLRRN+LQTA H+IAD+      E KMNV IK+    R RP+     TGTRSSAANRSR+ S
Subjt:  MAALKSLVSVALLALLLFSESLTASAVDRSGDSNSLTGMLRRNVLQTAAHQIADNSVESSPERKMNVHIKR----RMRPV----ATGTRSSAANRSRIAS

Query:  IGVGSVLVVLGLFL
         G+G +L   GL L
Subjt:  IGVGSVLVVLGLFL

TrEMBL top hitse value%identityAlignment
A0A0A0KAQ7 Uncharacterized protein1.5e-1857.89Show/hide
Query:  MAALKSLVSVALLALLLFSESLTASAVDRSGDSNSLTGMLRRNVLQTAAHQIADNSVESSPERKMNVHIKR----RMRPV----ATGTRSSAANRSRIAS
        MAA+KSL+S++LLALL FSESL+ SA +  G SNS+T MLRRN+LQTA H+IAD+      E KMNV IK+    R RP+     TGTRSSAANRSR+ S
Subjt:  MAALKSLVSVALLALLLFSESLTASAVDRSGDSNSLTGMLRRNVLQTAAHQIADNSVESSPERKMNVHIKR----RMRPV----ATGTRSSAANRSRIAS

Query:  IGVGSVLVVLGLFL
         G+G +L   GL L
Subjt:  IGVGSVLVVLGLFL

A0A1S3BRF6 protein no-on-transient A-like3.7e-0940.14Show/hide
Query:  MAALKSLVSVALLALLLFSESL-TASAVDRSGDSNSLTGMLRRNVLQTAAHQIADNSVESSPERKM-NVHIK----------------------------
        MAA+K+ + ++LLALL F E L       R   SNS+TG+L R +LQTAAH+ A ++VESS ERKM NVH+K                            
Subjt:  MAALKSLVSVALLALLLFSESL-TASAVDRSGDSNSLTGMLRRNVLQTAAHQIADNSVESSPERKM-NVHIK----------------------------

Query:  ------RRMRPVATGTRSSAANRSRIASIGVGSVLVVLGLFL
                +    TG   SAANRS +AS GVG +L +LGLF+
Subjt:  ------RRMRPVATGTRSSAANRSRIASIGVGSVLVVLGLFL

A0A1S3BT53 E3 ubiquitin-protein ligase MIEL1-like1.1e-0851Show/hide
Query:  MAALKSLVSVALLALLLFSESLTASAVDRSGDSNSLTGMLRRNVLQTAAHQIADNSVESSPERKMN-VHIK--RRMRPVATG-----TRSSAANRSRIAS
        MAA++ LVS+ALLALL FSESL          S+SLTG+  RN+L T AH+I + SVESS +RK N +H K  RR+RP+           SA NRSR+AS
Subjt:  MAALKSLVSVALLALLLFSESLTASAVDRSGDSNSLTGMLRRNVLQTAAHQIADNSVESSPERKMN-VHIK--RRMRPVATG-----TRSSAANRSRIAS

A0A5A7VLE5 Protein no-on-transient A-like4.0e-1960Show/hide
Query:  MAALKSLVSVALLALLLFSESLTASAVDRSGDSNSLTGMLRRNVLQTAAHQIADNSVESSPERKMNVHIKR----RMRPVA-----TGTRSSAANRSRIA
        MAA+KSL+ ++LLALL FSESL+ SA D  G SNS+TGMLRRNVLQTA H+IAD+      E KMNVHIKR    R+RPVA     TG R SAA+RS++A
Subjt:  MAALKSLVSVALLALLLFSESLTASAVDRSGDSNSLTGMLRRNVLQTAAHQIADNSVESSPERKMNVHIKR----RMRPVA-----TGTRSSAANRSRIA

Query:  SIGVGSVLVVLGLFL
        S G+G +L    LFL
Subjt:  SIGVGSVLVVLGLFL

A0A5D3D3Y6 E3 ubiquitin-protein ligase MIEL1-like2.3e-1151.28Show/hide
Query:  MAALKSLVSVALLALLLFSESLTASAVDRSGDSNSLTGMLRRNVLQTAAHQIADNSVESSPERKMN-VHIK--RRMRPVATG-----TRSSAANRSRIAS
        MAA++ LVS+ALLALL FSESL          S+SLTG+  RN+L T AH+I + SVESS +RK N +H K  RR+RP+           SA NRSR+AS
Subjt:  MAALKSLVSVALLALLLFSESLTASAVDRSGDSNSLTGMLRRNVLQTAAHQIADNSVESSPERKMN-VHIK--RRMRPVATG-----TRSSAANRSRIAS

Query:  IGVGSVL---VVLGLFL
          VGS+L   + LGLFL
Subjt:  IGVGSVL---VVLGLFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCTCTCAAATCCCTAGTTTCCGTAGCTCTTCTGGCTCTTCTCTTATTCTCCGAATCCCTAACAGCTTCTGCCGTCGATCGCAGCGGCGATTCAAATTCTCTCAC
CGGGATGCTCCGCCGAAACGTCCTTCAGACGGCGGCTCATCAGATTGCAGATAACAGTGTCGAGTCCTCCCCCGAAAGGAAGATGAATGTTCATATCAAAAGGCGGATGC
GACCAGTAGCAACTGGCACCCGTTCCTCGGCGGCGAATCGGAGCCGAATTGCTTCCATTGGCGTTGGATCTGTGCTCGTTGTTTTAGGGCTGTTCCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCTCTCAAATCCCTAGTTTCCGTAGCTCTTCTGGCTCTTCTCTTATTCTCCGAATCCCTAACAGCTTCTGCCGTCGATCGCAGCGGCGATTCAAATTCTCTCAC
CGGGATGCTCCGCCGAAACGTCCTTCAGACGGCGGCTCATCAGATTGCAGATAACAGTGTCGAGTCCTCCCCCGAAAGGAAGATGAATGTTCATATCAAAAGGCGGATGC
GACCAGTAGCAACTGGCACCCGTTCCTCGGCGGCGAATCGGAGCCGAATTGCTTCCATTGGCGTTGGATCTGTGCTCGTTGTTTTAGGGCTGTTCCTGTGA
Protein sequenceShow/hide protein sequence
MAALKSLVSVALLALLLFSESLTASAVDRSGDSNSLTGMLRRNVLQTAAHQIADNSVESSPERKMNVHIKRRMRPVATGTRSSAANRSRIASIGVGSVLVVLGLFL