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Carg07213 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07213
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGlutamic acid-rich protein
Genome locationCarg_Chr17:8348067..8348450
RNA-Seq ExpressionCarg07213
SyntenyCarg07213
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575870.1 hypothetical protein SDJN03_26509, partial [Cucurbita argyrosperma subsp. sororia]8.5e-63100Show/hide
Query:  MLSTPFFFNFHPHQFGNHIEDFSSHLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDDTPAMRNKVQTYENDDDDDDDDENEEEVESKPIGFMTESSA
        MLSTPFFFNFHPHQFGNHIEDFSSHLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDDTPAMRNKVQTYENDDDDDDDDENEEEVESKPIGFMTESSA
Subjt:  MLSTPFFFNFHPHQFGNHIEDFSSHLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDDTPAMRNKVQTYENDDDDDDDDENEEEVESKPIGFMTESSA

Query:  SIDSAEEFKMLNEVEKNRLFWETCLAS
        SIDSAEEFKMLNEVEKNRLFWETCLAS
Subjt:  SIDSAEEFKMLNEVEKNRLFWETCLAS

XP_022953969.1 uncharacterized protein LOC111456367 [Cucurbita moschata]8.2e-5895.28Show/hide
Query:  MLSTPFFFNFHPHQFGNHIEDFSSHLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDDTPAMRNKVQTYENDDDDDDDDENEEEVESKPIGFMTESSA
        MLSTPFFFNFHPHQ+G HIEDFSS LLFEATGDSEADSLVGHGSSTVSVEFNDAESCTD+TPAMRNKVQTYE  DDDDDDDENEEEVESKPIGFMTESSA
Subjt:  MLSTPFFFNFHPHQFGNHIEDFSSHLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDDTPAMRNKVQTYENDDDDDDDDENEEEVESKPIGFMTESSA

Query:  SIDSAEEFKMLNEVEKNRLFWETCLAS
        SIDSAEEFKMLNEVEKNRLFWETCLAS
Subjt:  SIDSAEEFKMLNEVEKNRLFWETCLAS

XP_022991734.1 uncharacterized protein LOC111488264 [Cucurbita maxima]2.8e-5894.53Show/hide
Query:  MLSTPFFFNFHPHQFGNHIEDFSSHLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDDTPAMRNKVQTYENDDDDDDDD-ENEEEVESKPIGFMTESS
        MLSTPFFFNFHPHQFGNHIEDFSSHLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDDTPAM N+ +TYENDDDDDDDD EN+EEVESKPIGFMTESS
Subjt:  MLSTPFFFNFHPHQFGNHIEDFSSHLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDDTPAMRNKVQTYENDDDDDDDD-ENEEEVESKPIGFMTESS

Query:  ASIDSAEEFKMLNEVEKNRLFWETCLAS
        ASIDSAEEFKMLNEV+KNRLFWETCLAS
Subjt:  ASIDSAEEFKMLNEVEKNRLFWETCLAS

XP_023522205.1 uncharacterized protein LOC111786091 [Cucurbita pepo subsp. pepo]3.1e-5793.7Show/hide
Query:  MLSTPFFFNFHPHQFGNHIEDFSSHLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDDTPAMRNKVQTYENDDDDDDDDENEEEVESKPIGFMTESSA
        MLSTPFFFNFHPHQFGNHIEDFSSHLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDDTPAMRN+VQ YEN    DDDDEN+EEVESKPIGFMTESS 
Subjt:  MLSTPFFFNFHPHQFGNHIEDFSSHLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDDTPAMRNKVQTYENDDDDDDDDENEEEVESKPIGFMTESSA

Query:  SIDSAEEFKMLNEVEKNRLFWETCLAS
        SIDSAEEFKMLNEVEKNRLFWETCLAS
Subjt:  SIDSAEEFKMLNEVEKNRLFWETCLAS

XP_038896353.1 uncharacterized protein LOC120084618 [Benincasa hispida]6.3e-3464.44Show/hide
Query:  MLSTPFFFNFHPHQF----GNHIEDFSSHLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDDTPAM-RNKVQTYENDDDDDD---DDENEEEVESKPI
        MLSTP FFNF+PH F    GNHIED SS+ L EATGDSE DS V  G S  S EFNDAESCTDDTP +  N+   YE +D+D++   +++ +E VESK I
Subjt:  MLSTPFFFNFHPHQF----GNHIEDFSSHLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDDTPAM-RNKVQTYENDDDDDD---DDENEEEVESKPI

Query:  GFMTESSASIDSAEEFKMLNEVEKNRLFWETCLAS
        GF T+S+ASIDS +EFKMLNEV+KNRLFWETCLAS
Subjt:  GFMTESSASIDSAEEFKMLNEVEKNRLFWETCLAS

TrEMBL top hitse value%identityAlignment
A0A0A0K519 Uncharacterized protein4.1e-3162.68Show/hide
Query:  MLSTPFFFNFHPHQF----GNHIEDFSSHLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDDTPAMR---------NKVQTYENDDDDDDDDENEEE-
        MLS+P FFNF+PH F    GNHIED SS+ LFEATGDSE D      SS VS EFNDAESCTDDT  +           +    ENDDDD D++E EEE 
Subjt:  MLSTPFFFNFHPHQF----GNHIEDFSSHLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDDTPAMR---------NKVQTYENDDDDDDDDENEEE-

Query:  VESKPIGFMTESSASIDSA-EEFKMLNEVEKNRLFWETCLAS
        VESK IGF  +S+ASIDS  +EFKMLNEV+KNRLFWETCLAS
Subjt:  VESKPIGFMTESSASIDSA-EEFKMLNEVEKNRLFWETCLAS

A0A1S3BRI2 glutamic acid-rich protein2.4e-3161.33Show/hide
Query:  MLST-PFFFNFHPHQF----GNHIEDFSSHLLFEATGDSEADSLVG--HGSSTVSVEFNDAESCTDDTPAM-------------RNKVQTYENDDDDDDD
        MLST P FFNF+PH F    GNHIED SS+ LFEATGDSEADS V     SS  + EFNDAESCTDDTP M              +  +  ENDDDD DD
Subjt:  MLST-PFFFNFHPHQF----GNHIEDFSSHLLFEATGDSEADSLVG--HGSSTVSVEFNDAESCTDDTPAM-------------RNKVQTYENDDDDDDD

Query:  DENEEE--VESKPIGFMTESSASIDSA-EEFKMLNEVEKNRLFWETCLAS
        ++ EEE  VESK IGF  +S+ASIDS  ++FKMLNEV+KNRLFWETCLAS
Subjt:  DENEEE--VESKPIGFMTESSASIDSA-EEFKMLNEVEKNRLFWETCLAS

A0A5A7UVG0 Glutamic acid-rich protein6.4e-3261.9Show/hide
Query:  MLST-PFFFNFHPHQF----GNHIEDFSSHLLFEATGDSEADSLVG--HGSSTVSVEFNDAESCTDDTPAM------------RNKVQTYENDDDDDDDD
        MLST P FFNF+PH F    GNHIED SS+ LFEATGDSEADS V     SS  + EFNDAESCTDDTP M             +  +  ENDDDD D++
Subjt:  MLST-PFFFNFHPHQF----GNHIEDFSSHLLFEATGDSEADSLVG--HGSSTVSVEFNDAESCTDDTPAM------------RNKVQTYENDDDDDDDD

Query:  ENEEEVESKPIGFMTESSASIDSA-EEFKMLNEVEKNRLFWETCLAS
        E EE VESK IGF  +S+ASIDS  ++FKMLNEV+KNRLFWETCLAS
Subjt:  ENEEEVESKPIGFMTESSASIDSA-EEFKMLNEVEKNRLFWETCLAS

A0A6J1GRH1 uncharacterized protein LOC1114563674.0e-5895.28Show/hide
Query:  MLSTPFFFNFHPHQFGNHIEDFSSHLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDDTPAMRNKVQTYENDDDDDDDDENEEEVESKPIGFMTESSA
        MLSTPFFFNFHPHQ+G HIEDFSS LLFEATGDSEADSLVGHGSSTVSVEFNDAESCTD+TPAMRNKVQTYE  DDDDDDDENEEEVESKPIGFMTESSA
Subjt:  MLSTPFFFNFHPHQFGNHIEDFSSHLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDDTPAMRNKVQTYENDDDDDDDDENEEEVESKPIGFMTESSA

Query:  SIDSAEEFKMLNEVEKNRLFWETCLAS
        SIDSAEEFKMLNEVEKNRLFWETCLAS
Subjt:  SIDSAEEFKMLNEVEKNRLFWETCLAS

A0A6J1JVN0 uncharacterized protein LOC1114882641.4e-5894.53Show/hide
Query:  MLSTPFFFNFHPHQFGNHIEDFSSHLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDDTPAMRNKVQTYENDDDDDDDD-ENEEEVESKPIGFMTESS
        MLSTPFFFNFHPHQFGNHIEDFSSHLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDDTPAM N+ +TYENDDDDDDDD EN+EEVESKPIGFMTESS
Subjt:  MLSTPFFFNFHPHQFGNHIEDFSSHLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDDTPAMRNKVQTYENDDDDDDDD-ENEEEVESKPIGFMTESS

Query:  ASIDSAEEFKMLNEVEKNRLFWETCLAS
        ASIDSAEEFKMLNEV+KNRLFWETCLAS
Subjt:  ASIDSAEEFKMLNEVEKNRLFWETCLAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G47950.1 unknown protein2.5e-0431.3Show/hide
Query:  NHIEDFSSHLLFEATGDSEADSLVGHGS---------STVSVEFNDAESCTDDTPAMRNKVQTYENDDD----------DDDDDENEEEVESK-PIGFMT
        N++ D S  LL EA+ DSEA    GH S           +  E + A SC     + R  +  ++  DD          D++D++ E EV S    G   
Subjt:  NHIEDFSSHLLFEATGDSEADSLVGHGS---------STVSVEFNDAESCTDDTPAMRNKVQTYENDDD----------DDDDDENEEEVESK-PIGFMT

Query:  ESSASIDSAEEFKMLNEVEKNRLFWETCLAS
          + ++DSA    +++E+++NR+FWE CLAS
Subjt:  ESSASIDSAEEFKMLNEVEKNRLFWETCLAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTCAACTCCTTTCTTCTTCAACTTCCATCCTCACCAATTTGGCAACCACATTGAGGATTTTTCATCTCATTTGCTCTTCGAGGCGACGGGCGACTCCGAGGCCGA
CTCCTTGGTCGGCCACGGAAGCTCGACCGTCTCGGTGGAGTTCAACGACGCTGAATCTTGCACGGATGACACTCCTGCTATGCGTAACAAGGTCCAGACGTATGAAAACG
ATGACGATGACGATGACGATGACGAGAATGAGGAGGAGGTGGAAAGCAAGCCAATTGGATTCATGACAGAGTCAAGTGCTTCTATTGATTCAGCTGAGGAGTTCAAAATG
TTGAATGAGGTGGAGAAAAACAGGTTGTTTTGGGAGACTTGTTTGGCTTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTCTCAACTCCTTTCTTCTTCAACTTCCATCCTCACCAATTTGGCAACCACATTGAGGATTTTTCATCTCATTTGCTCTTCGAGGCGACGGGCGACTCCGAGGCCGA
CTCCTTGGTCGGCCACGGAAGCTCGACCGTCTCGGTGGAGTTCAACGACGCTGAATCTTGCACGGATGACACTCCTGCTATGCGTAACAAGGTCCAGACGTATGAAAACG
ATGACGATGACGATGACGATGACGAGAATGAGGAGGAGGTGGAAAGCAAGCCAATTGGATTCATGACAGAGTCAAGTGCTTCTATTGATTCAGCTGAGGAGTTCAAAATG
TTGAATGAGGTGGAGAAAAACAGGTTGTTTTGGGAGACTTGTTTGGCTTCGTAA
Protein sequenceShow/hide protein sequence
MLSTPFFFNFHPHQFGNHIEDFSSHLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDDTPAMRNKVQTYENDDDDDDDDENEEEVESKPIGFMTESSASIDSAEEFKM
LNEVEKNRLFWETCLAS