; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg07221 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07221
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLEC14B homolog
Genome locationCarg_Chr17:8386247..8388941
RNA-Seq ExpressionCarg07221
SyntenyCarg07221
Gene Ontology termsGO:0043161 - proteasome-mediated ubiquitin-dependent protein catabolic process (biological process)
GO:0080008 - Cul4-RING E3 ubiquitin ligase complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR036322 - WD40-repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014412.1 hypothetical protein SDJN02_24589, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-69100Show/hide
Query:  MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW
        MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW
Subjt:  MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW

Query:  EFPGSGEAPTPPNKKRVRRRHYY
        EFPGSGEAPTPPNKKRVRRRHYY
Subjt:  EFPGSGEAPTPPNKKRVRRRHYY

XP_022954198.1 LEC14B protein [Cucurbita moschata]2.0e-69100Show/hide
Query:  MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW
        MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW
Subjt:  MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW

Query:  EFPGSGEAPTPPNKKRVRRRHYY
        EFPGSGEAPTPPNKKRVRRRHYY
Subjt:  EFPGSGEAPTPPNKKRVRRRHYY

XP_022992516.1 LEC14B protein [Cucurbita maxima]2.9e-6898.37Show/hide
Query:  MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW
        MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTG LVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW
Subjt:  MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW

Query:  EFPGSGEAPTPPNKKRVRRRHYY
        EFPGSGEAPTPPNKKRVRRRH+Y
Subjt:  EFPGSGEAPTPPNKKRVRRRHYY

XP_023522133.1 LEC14B protein-like [Cucurbita pepo subsp. pepo]5.9e-6999.19Show/hide
Query:  MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW
        MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW
Subjt:  MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW

Query:  EFPGSGEAPTPPNKKRVRRRHYY
        EFPGSGEAPTPPNKKRVRRRH+Y
Subjt:  EFPGSGEAPTPPNKKRVRRRHYY

XP_023548494.1 LEC14B homolog [Cucurbita pepo subsp. pepo]5.9e-6999.19Show/hide
Query:  MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW
        MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW
Subjt:  MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW

Query:  EFPGSGEAPTPPNKKRVRRRHYY
        EFPGSGEAPTPPNKKRVRRRH+Y
Subjt:  EFPGSGEAPTPPNKKRVRRRHYY

TrEMBL top hitse value%identityAlignment
A0A0A0K5S4 LEC14B homolog5.9e-6795.93Show/hide
Query:  MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW
        MDYP HAKNLMHPRDRS+ATYKGHSVLRTLIRCYFSPE STGQKYIYTGSHNSCVYIYDLLTG LVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW
Subjt:  MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW

Query:  EFPGSGEAPTPPNKKRVRRRHYY
        EFPGSGEAPTPPNKKRVRRRH+Y
Subjt:  EFPGSGEAPTPPNKKRVRRRHYY

A0A1S3BRH2 LEC14B homolog1.3e-6695.93Show/hide
Query:  MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW
        MDYP HAKNLMHP DRSVATYKGHSVLRTLIRCYFSPE STGQKYIYTGSHNSCVYIYDLLTG LVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW
Subjt:  MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW

Query:  EFPGSGEAPTPPNKKRVRRRHYY
        EFPGSGEAPTPPNKKRVRRRH+Y
Subjt:  EFPGSGEAPTPPNKKRVRRRHYY

A0A5D3D413 LEC14B homolog2.7e-6796.75Show/hide
Query:  MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW
        MDYP HAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPE STGQKYIYTGSHNSCVYIYDLLTG LVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW
Subjt:  MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW

Query:  EFPGSGEAPTPPNKKRVRRRHYY
        EFPGSGEAPTPPNKKRVRRRH+Y
Subjt:  EFPGSGEAPTPPNKKRVRRRHYY

A0A6J1GQE7 LEC14B homolog9.8e-70100Show/hide
Query:  MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW
        MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW
Subjt:  MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW

Query:  EFPGSGEAPTPPNKKRVRRRHYY
        EFPGSGEAPTPPNKKRVRRRHYY
Subjt:  EFPGSGEAPTPPNKKRVRRRHYY

A0A6J1JQ33 LEC14B homolog1.4e-6898.37Show/hide
Query:  MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW
        MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTG LVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW
Subjt:  MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW

Query:  EFPGSGEAPTPPNKKRVRRRHYY
        EFPGSGEAPTPPNKKRVRRRH+Y
Subjt:  EFPGSGEAPTPPNKKRVRRRHYY

SwissProt top hitse value%identityAlignment
O24467 LEC14B homolog5.0e-4769.17Show/hide
Query:  MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW
        M+YP HAK L HP D+S+ATY+GH VLRTLIRCY SP  STGQKYIYTGS + CVYIYDL+TGA VA L HH+ PVRDCSWHP YPMLVSSSWDG + +W
Subjt:  MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW

Query:  EFPGSGEAPTPPNKKRVRRR
        EFPG  + PT   + R RR+
Subjt:  EFPGSGEAPTPPNKKRVRRR

Q40153 LEC14B protein4.7e-4568.07Show/hide
Query:  MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW
        M+YP  A++L HP D S ATYKGHSVL TLIRCYFSP+ STGQKYIYTGSH++ VYIYDL+TG  V+TL++HK+ VRDCSWHP YPMLVSSS+DG++VKW
Subjt:  MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW

Query:  EFPGSGEAPTPPNKKRVRR
        E+ G+ EAP   N +R++R
Subjt:  EFPGSGEAPTPPNKKRVRR

Q5E9I8 DDB1- and CUL4-associated factor 116.0e-2447.83Show/hide
Query:  KNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKWEF-----
        + L  P D S+ TY+GH VL TLIRC FSP  STGQ++IY+G     V +YDLL+G +V  L  HK+ VRD SWHP    +VSSSWDG++  W++     
Subjt:  KNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKWEF-----

Query:  -----PGSGEAPTPP
             P S E P+ P
Subjt:  -----PGSGEAPTPP

Q5M9G8 DDB1- and CUL4-associated factor 112.1e-2453.68Show/hide
Query:  KNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKWEF
        K L  P D S+ TY+GH VL TLIRC FSP  STGQ++IY+G     V +YDLL+G +V  L +HK+ VRD SWHP    +VSSSWDG +  W++
Subjt:  KNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKWEF

Q91VU6 DDB1- and CUL4-associated factor 111.6e-2453.68Show/hide
Query:  KNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKWEF
        K L  P D S+ TY+GH VL TLIRC FSP  STGQ++IY+G     V +YDLL+G +V  L +HK+ VRD SWHP    +VSSSWDG++  W++
Subjt:  KNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKWEF

Arabidopsis top hitse value%identityAlignment
AT1G11160.1 Transducin/WD40 repeat-like superfamily protein8.9e-0730.95Show/hide
Query:  VATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKWE
        + TYKGH+  R +    FSP+     +++ +G  ++ V ++DL  G L+   K H+ P+R   +HP   +L + S D  V  W+
Subjt:  VATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKWE

AT4G03020.1 transducin family protein / WD-40 repeat family protein2.5e-5476.42Show/hide
Query:  MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW
        MDYP  A++L HP D+SV+TYKGHSVLRTLIRCYFSP  STGQKYIYTGS++S VYIYDL++G  VA LKHH SPVRDC+WHP YP L+SSSWDGD+VKW
Subjt:  MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW

Query:  EFPGSGEAPTPPNKKRVRRRHYY
        EFPGSGEAP   +KKRVRRRH+Y
Subjt:  EFPGSGEAPTPPNKKRVRRRHYY

AT4G03020.2 transducin family protein / WD-40 repeat family protein2.5e-5476.42Show/hide
Query:  MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW
        MDYP  A++L HP D+SV+TYKGHSVLRTLIRCYFSP  STGQKYIYTGS++S VYIYDL++G  VA LKHH SPVRDC+WHP YP L+SSSWDGD+VKW
Subjt:  MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKW

Query:  EFPGSGEAPTPPNKKRVRRRHYY
        EFPGSGEAP   +KKRVRRRH+Y
Subjt:  EFPGSGEAPTPPNKKRVRRRHYY

AT5G08560.1 transducin family protein / WD-40 repeat family protein1.4e-0739.29Show/hide
Query:  VATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHP-QYPMLVSSSWDGDVVKW
        V+ YKGH   R +IR  F       Q +I +GS +S VYI+   TG L+  L  H   V   SW P    ML S+S DG +  W
Subjt:  VATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHP-QYPMLVSSSWDGDVVKW

AT5G08560.2 transducin family protein / WD-40 repeat family protein1.4e-0739.29Show/hide
Query:  VATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHP-QYPMLVSSSWDGDVVKW
        V+ YKGH   R +IR  F       Q +I +GS +S VYI+   TG L+  L  H   V   SW P    ML S+S DG +  W
Subjt:  VATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHP-QYPMLVSSSWDGDVVKW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTATCCACTCCATGCTAAAAATTTGATGCATCCACGTGATCGATCTGTTGCTACATACAAGGGTCATTCAGTCCTGCGAACGCTTATCCGTTGTTATTTCTCCCC
GGAATCTAGCACCGGCCAGAAGTACATCTACACCGGATCTCACAATTCTTGCGTTTATATCTATGATTTGTTGACTGGAGCTCTAGTTGCAACACTGAAGCATCATAAAT
CACCAGTAAGAGACTGTAGCTGGCACCCTCAATATCCAATGCTTGTAAGCTCTTCATGGGATGGGGATGTTGTCAAATGGGAGTTTCCAGGCAGCGGTGAAGCTCCGACT
CCTCCGAACAAGAAGAGAGTCCGCAGGCGACATTACTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTATCCACTCCATGCTAAAAATTTGATGCATCCACGTGATCGATCTGTTGCTACATACAAGGGTCATTCAGTCCTGCGAACGCTTATCCGTTGTTATTTCTCCCC
GGAATCTAGCACCGGCCAGAAGTACATCTACACCGGATCTCACAATTCTTGCGTTTATATCTATGATTTGTTGACTGGAGCTCTAGTTGCAACACTGAAGCATCATAAAT
CACCAGTAAGAGACTGTAGCTGGCACCCTCAATATCCAATGCTTGTAAGCTCTTCATGGGATGGGGATGTTGTCAAATGGGAGTTTCCAGGCAGCGGTGAAGCTCCGACT
CCTCCGAACAAGAAGAGAGTCCGCAGGCGACATTACTATTGAAAACTGCTGAAGAAAACTGTAAGGCAAGCTCTTTCTGGTGGATTATAGCTTGGCAAATGCAGTATATC
TTGCTCTGTGATGCATGCATCCTATCATACTCTTGAAAATAAGATGCAATTAGTATGCATTTTATATCTCACCGTTGCAGTATTTTGTTGGTTCTACTTGACGAATCTTT
GATATCATGTTTCTGTCTATAATCTATGTGAATAATATGATATAATACATACATACACATATATATAGTGTATAAATTTGTTGAATAATGATCAACAAAATGGTGGAAAT
AGCAAGCATCGGTATATTCCTTCTT
Protein sequenceShow/hide protein sequence
MDYPLHAKNLMHPRDRSVATYKGHSVLRTLIRCYFSPESSTGQKYIYTGSHNSCVYIYDLLTGALVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKWEFPGSGEAPT
PPNKKRVRRRHYY