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Carg07226 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07226
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAuxin-binding protein
Genome locationCarg_Chr17:8432324..8434456
RNA-Seq ExpressionCarg07226
SyntenyCarg07226
Gene Ontology termsGO:0000911 - cytokinesis by cell plate formation (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0009826 - unidimensional cell growth (biological process)
GO:0032877 - positive regulation of DNA endoreduplication (biological process)
GO:0045793 - positive regulation of cell size (biological process)
GO:0051781 - positive regulation of cell division (biological process)
GO:0005788 - endoplasmic reticulum lumen (cellular component)
GO:0010011 - auxin binding (molecular function)
InterPro domainsIPR000526 - Auxin-binding protein
IPR011051 - RmlC-like cupin domain superfamily
IPR014710 - RmlC-like jelly roll fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014417.1 Auxin-binding protein T85, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-95100Show/hide
Query:  MDPGLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHI
        MDPGLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHI
Subjt:  MDPGLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHI

Query:  PVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPVKDEL
        PVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPVKDEL
Subjt:  PVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPVKDEL

XP_022150242.1 auxin-binding protein T85 isoform X2 [Momordica charantia]7.0e-8691.93Show/hide
Query:  GLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVN
        GLPLVRNISELPQDNYGRGGLSHITVAGS+LHGLKEVEVWLQTFSPGSHTPIHRHSCEEVF+VLKGTGTL+LAP SH KYPGTPKEFSIYSN TF IP+N
Subjt:  GLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVN

Query:  DAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPVKDEL
        DAHQ+WNTNEHEDLQMLVIISRPPAKVFIY DW+MPHTAARLKFPY WDEQCFE PVKDEL
Subjt:  DAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPVKDEL

XP_022953527.1 auxin-binding protein T85 [Cucurbita moschata]2.0e-93100Show/hide
Query:  GLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVN
        GLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVN
Subjt:  GLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVN

Query:  DAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPVKDEL
        DAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPVKDEL
Subjt:  DAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPVKDEL

XP_022992557.1 auxin-binding protein T85 [Cucurbita maxima]1.0e-9298.76Show/hide
Query:  GLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVN
        GLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVF+VLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVN
Subjt:  GLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVN

Query:  DAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPVKDEL
        DAHQIWNTNEHEDLQMLVIISRPPAKVFIY+DWAMPHTAARLKFPYYWDEQCFEAPVKDEL
Subjt:  DAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPVKDEL

XP_023549483.1 auxin-binding protein T85 [Cucurbita pepo subsp. pepo]1.0e-9298.76Show/hide
Query:  GLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVN
        GLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVF+VLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVN
Subjt:  GLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVN

Query:  DAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPVKDEL
        DAHQIWNTNEHEDLQMLVIISRPPAKVFIY+DWAMPHTAARLKFPYYWDEQCFEAPVKDEL
Subjt:  DAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPVKDEL

TrEMBL top hitse value%identityAlignment
A0A5A7UNW3 Auxin-binding protein T851.4e-8492.59Show/hide
Query:  GLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVN
        GLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVF+VLKGTGTL+ APSSH KYPGTPKEF IYSN TF IPVN
Subjt:  GLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVN

Query:  DAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEA-PVKDEL
        DAHQ+ NTNEHEDLQMLVIISRPPAKVFIY+DW MPHTAARLKFPYYWDEQCFEA PVKDEL
Subjt:  DAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEA-PVKDEL

A0A6J1DA75 auxin-binding protein T85 isoform X23.4e-8691.93Show/hide
Query:  GLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVN
        GLPLVRNISELPQDNYGRGGLSHITVAGS+LHGLKEVEVWLQTFSPGSHTPIHRHSCEEVF+VLKGTGTL+LAP SH KYPGTPKEFSIYSN TF IP+N
Subjt:  GLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVN

Query:  DAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPVKDEL
        DAHQ+WNTNEHEDLQMLVIISRPPAKVFIY DW+MPHTAARLKFPY WDEQCFE PVKDEL
Subjt:  DAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPVKDEL

A0A6J1DAY4 auxin-binding protein T85 isoform X11.7e-8591.88Show/hide
Query:  LPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVND
        LPLVRNISELPQDNYGRGGLSHITVAGS+LHGLKEVEVWLQTFSPGSHTPIHRHSCEEVF+VLKGTGTL+LAP SH KYPGTPKEFSIYSN TF IP+ND
Subjt:  LPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVND

Query:  AHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPVKDEL
        AHQ+WNTNEHEDLQMLVIISRPPAKVFIY DW+MPHTAARLKFPY WDEQCFE PVKDEL
Subjt:  AHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPVKDEL

A0A6J1GNG5 auxin-binding protein T859.9e-94100Show/hide
Query:  GLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVN
        GLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVN
Subjt:  GLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVN

Query:  DAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPVKDEL
        DAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPVKDEL
Subjt:  DAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPVKDEL

A0A6J1JQ76 auxin-binding protein T854.9e-9398.76Show/hide
Query:  GLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVN
        GLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVF+VLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVN
Subjt:  GLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVN

Query:  DAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPVKDEL
        DAHQIWNTNEHEDLQMLVIISRPPAKVFIY+DWAMPHTAARLKFPYYWDEQCFEAPVKDEL
Subjt:  DAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPVKDEL

SwissProt top hitse value%identityAlignment
P13689 Auxin-binding protein 19.3e-6571.52Show/hide
Query:  LVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVNDAH
        LVR+IS++PQ +YG  GLSHITVAG+L HG+KEVEVWLQT SPG  TPIHRHSCEEVF VLKG GTL +  SS  KYPG P+E   + N TF IPVND H
Subjt:  LVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVNDAH

Query:  QIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPVKDEL
        Q+WN++EHEDLQ+LVIISRPPAK+F+Y+DW+MPHTAA LKFP+ WDE CFEA  KDEL
Subjt:  QIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPVKDEL

P33487 Auxin-binding protein 19.3e-7376.4Show/hide
Query:  GLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVN
        GLP+VRNIS+LPQDNYGR GLSH+TVAGS+LHG+KEVE+WLQTF+PGS TPIHRHSCEEVF+VLKG+GTL+LA  +HG +PG P EF I++N T HIP+N
Subjt:  GLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVN

Query:  DAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPVKDEL
        DAHQ+ NT  HEDLQ+LVIISRPP K+FIYEDW MPHTAARLKFPYYWDEQC +   KDEL
Subjt:  DAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPVKDEL

P33488 Auxin-binding protein 44.9e-6672.15Show/hide
Query:  LVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVNDAH
        LVR+IS + Q NYGR G SHITV G+L HG KEVEVWLQTF PG  TPIHRHSCEEVF+VLKG GTL L  SS  KYPG P+E  ++ N TF IPVND H
Subjt:  LVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVNDAH

Query:  QIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPVKDEL
        Q+WN+NEHEDLQ+LVIISRPP K+FIY+DW+MPHTAA+LKFPY+WDE C  AP KDEL
Subjt:  QIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPVKDEL

P33490 Auxin-binding protein T854.8e-7775.93Show/hide
Query:  GLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVN
        GLPLVRNISELPQ+NYGR GLSH T+AGS+LHG+KE+EVWLQTF+PGS TPIHRHSCEE+F+VLKG G L+L PSSH KYPG P+EF I+ N TFHIPVN
Subjt:  GLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVN

Query:  DAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPV-KDEL
        D HQ+WNT EHEDLQ+LV+ISRPP KVF+Y+DW+MPHTAA+LKFPYYWDE+C++    KDEL
Subjt:  DAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPV-KDEL

P33491 Auxin-binding protein T922.0e-7574.69Show/hide
Query:  GLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVN
        GLPLVRNISELPQ+NYGR GLSH T+AGS+LHG+KE+EVWLQTF+PG  TPIHRHSCEE+F+VLKG GTL+L PSSH KYPG P+EF I+ N TFHIPVN
Subjt:  GLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVN

Query:  DAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPV-KDEL
        D HQ+WNT E EDLQ+L +ISRPP KVF+Y+DW+MPHTAA+LKFPYYWDE+C++    KDEL
Subjt:  DAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPV-KDEL

Arabidopsis top hitse value%identityAlignment
AT4G02980.1 endoplasmic reticulum auxin binding protein 16.6e-7476.4Show/hide
Query:  GLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVN
        GLP+VRNIS+LPQDNYGR GLSH+TVAGS+LHG+KEVE+WLQTF+PGS TPIHRHSCEEVF+VLKG+GTL+LA  +HG +PG P EF I++N T HIP+N
Subjt:  GLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVN

Query:  DAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPVKDEL
        DAHQ+ NT  HEDLQ+LVIISRPP K+FIYEDW MPHTAARLKFPYYWDEQC +   KDEL
Subjt:  DAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPVKDEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCAGGGTTGCCTCTAGTAAGAAATATCAGTGAGCTTCCACAAGATAACTATGGAAGGGGAGGCTTGTCTCACATTACCGTTGCAGGTTCACTATTGCATGGGCT
GAAGGAGGTGGAGGTGTGGCTCCAAACATTTTCCCCTGGATCACACACACCTATTCACAGGCACTCGTGTGAAGAAGTTTTTCTGGTTTTGAAGGGGACTGGCACTCTCT
TTCTCGCACCTAGTTCTCATGGAAAGTACCCTGGAACACCAAAAGAATTTTCTATCTATTCAAACTGTACATTTCACATACCTGTTAATGATGCTCACCAGATATGGAAT
ACGAATGAACATGAGGATTTGCAGATGCTTGTCATCATTTCCAGGCCACCAGCCAAAGTGTTTATTTATGAGGACTGGGCCATGCCCCATACTGCTGCAAGATTGAAGTT
CCCCTACTATTGGGATGAACAGTGTTTTGAAGCGCCCGTAAAGGATGAACTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCCAGGGTTGCCTCTAGTAAGAAATATCAGTGAGCTTCCACAAGATAACTATGGAAGGGGAGGCTTGTCTCACATTACCGTTGCAGGTTCACTATTGCATGGGCT
GAAGGAGGTGGAGGTGTGGCTCCAAACATTTTCCCCTGGATCACACACACCTATTCACAGGCACTCGTGTGAAGAAGTTTTTCTGGTTTTGAAGGGGACTGGCACTCTCT
TTCTCGCACCTAGTTCTCATGGAAAGTACCCTGGAACACCAAAAGAATTTTCTATCTATTCAAACTGTACATTTCACATACCTGTTAATGATGCTCACCAGATATGGAAT
ACGAATGAACATGAGGATTTGCAGATGCTTGTCATCATTTCCAGGCCACCAGCCAAAGTGTTTATTTATGAGGACTGGGCCATGCCCCATACTGCTGCAAGATTGAAGTT
CCCCTACTATTGGGATGAACAGTGTTTTGAAGCGCCCGTAAAGGATGAACTTTGA
Protein sequenceShow/hide protein sequence
MDPGLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVNDAHQIWN
TNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCFEAPVKDEL