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Carg07293 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07293
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionconserved peptide upstream open reading frame 7
Genome locationCarg_Chr17:8834230..8838035
RNA-Seq ExpressionCarg07293
SyntenyCarg07293
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4291531.1 unnamed protein product [Prunus armeniaca]5.8e-0685.71Show/hide
Query:  GMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
        GMGTD LL  A+GPPIKRRAGLR KQAGRGSYRGS
Subjt:  GMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS

CAB4321849.1 unnamed protein product [Prunus armeniaca]5.8e-0685.71Show/hide
Query:  GMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
        GMGTD LL  A+GPPIKRRAGLR KQAGRGSYRGS
Subjt:  GMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS

KAB2075556.1 hypothetical protein ES319_A07G229800v1 [Gossypium barbadense]9.9e-0682.86Show/hide
Query:  GMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
        GMGTD LL P +GPPIK RAGLR KQAGRGSYRGS
Subjt:  GMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS

KAG7014483.1 hypothetical protein SDJN02_24661, partial [Cucurbita argyrosperma subsp. argyrosperma]6.1e-48100Show/hide
Query:  MADEIRKMRRVETVPEGMEVEHDQCCSAVNKLRVPPGFNLALVRVICGGSASKRALTVAVLVLNGLGMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRG
        MADEIRKMRRVETVPEGMEVEHDQCCSAVNKLRVPPGFNLALVRVICGGSASKRALTVAVLVLNGLGMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRG
Subjt:  MADEIRKMRRVETVPEGMEVEHDQCCSAVNKLRVPPGFNLALVRVICGGSASKRALTVAVLVLNGLGMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRG

Query:  S
        S
Subjt:  S

XP_016901085.1 PREDICTED: uncharacterized protein LOC107991169 [Cucumis melo]9.9e-0685.29Show/hide
Query:  MGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
        MGTD LL P +GPPIKRRAGLR KQAGRGSYRGS
Subjt:  MGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS

TrEMBL top hitse value%identityAlignment
A0A1S4DZE0 uncharacterized protein LOC1079911694.8e-0685.29Show/hide
Query:  MGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
        MGTD LL P +GPPIKRRAGLR KQAGRGSYRGS
Subjt:  MGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS

A0A5D2G1M8 Uncharacterized protein4.8e-0682.86Show/hide
Query:  GMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
        GMGTD LL P +GPPIK RAGLR KQAGRGSYRGS
Subjt:  GMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS

A0A5J5V730 Uncharacterized protein4.8e-0682.86Show/hide
Query:  GMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
        GMGTD LL P +GPPIK RAGLR KQAGRGSYRGS
Subjt:  GMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS

A0A6J5VU64 Uncharacterized protein2.8e-0685.71Show/hide
Query:  GMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
        GMGTD LL  A+GPPIKRRAGLR KQAGRGSYRGS
Subjt:  GMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS

A0A6J5Y7L9 Uncharacterized protein2.8e-0685.71Show/hide
Query:  GMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
        GMGTD LL  A+GPPIKRRAGLR KQAGRGSYRGS
Subjt:  GMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G06149.1 conserved peptide upstream open reading frame 81.2e-0464.71Show/hide
Query:  MGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
        MGT       +GPPI  RAGLR +QAGRGSYRGS
Subjt:  MGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS

AT2G31280.2 conserved peptide upstream open reading frame 73.4e-0462.5Show/hide
Query:  MGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYR
        MG   +    +GPPIK RAGLR +QAGRGSYR
Subjt:  MGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYR

AT2G31280.4 conserved peptide upstream open reading frame 73.1e-0564.71Show/hide
Query:  MGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
        MG   +    +GPPIK RAGLR +QAGRGSYRGS
Subjt:  MGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATGAAATTCGAAAGATGAGGAGAGTAGAAACAGTACCAGAAGGGATGGAGGTGGAGCACGATCAATGTTGTAGCGCCGTCAACAAGCTTAGGGTTCCGCCGGG
GTTTAATCTTGCCCTTGTTCGAGTGATCTGTGGTGGGTCTGCGAGTAAAAGAGCTCTTACTGTTGCTGTTCTTGTTCTTAATGGATTGGGGATGGGAACTGATCCTCTGC
TATCACCAGCAATTGGACCGCCAATAAAACGGCGAGCAGGATTGAGGATAAAGCAGGCTGGTAGAGGCTCATACAGGGGAAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGATGAAATTCGAAAGATGAGGAGAGTAGAAACAGTACCAGAAGGGATGGAGGTGGAGCACGATCAATGTTGTAGCGCCGTCAACAAGCTTAGGGTTCCGCCGGG
GTTTAATCTTGCCCTTGTTCGAGTGATCTGTGGTGGGTCTGCGAGTAAAAGAGCTCTTACTGTTGCTGTTCTTGTTCTTAATGGATTGGGGATGGGAACTGATCCTCTGC
TATCACCAGCAATTGGACCGCCAATAAAACGGCGAGCAGGATTGAGGATAAAGCAGGCTGGTAGAGGCTCATACAGGGGAAGCTAG
Protein sequenceShow/hide protein sequence
MADEIRKMRRVETVPEGMEVEHDQCCSAVNKLRVPPGFNLALVRVICGGSASKRALTVAVLVLNGLGMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS