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Carg07302 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07302
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCalcium-binding EF-hand
Genome locationCarg_Chr01:1006809..1007237
RNA-Seq ExpressionCarg07302
SyntenyCarg07302
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022949190.1 uncharacterized protein LOC111452614 [Cucurbita moschata]1.4e-69100Show/hide
Query:  MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKN
        MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKN
Subjt:  MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKN

Query:  ILLAIADGLGSSPIQMALSDDDQSFLKQAADLEASKLAQSSA
        ILLAIADGLGSSPIQMALSDDDQSFLKQAADLEASKLAQSSA
Subjt:  ILLAIADGLGSSPIQMALSDDDQSFLKQAADLEASKLAQSSA

XP_022983603.1 uncharacterized protein LOC111482160 [Cucurbita maxima]7.7e-6592.96Show/hide
Query:  MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKN
        M VVVIDGSTVRNFVNDESHFKKSV++AFAALDLNNDGVLSR+ELRKAFETLRLIETHFGVDV TPPE+LTQLYDSIFEQFDCDKSG+VDA+EFRTEMKN
Subjt:  MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKN

Query:  ILLAIADGLGSSPIQMALSDDDQSFLKQAADLEASKLAQSSA
        ILLAIADGLGSSPIQMAL D DQSFLKQAADLEASKLAQSSA
Subjt:  ILLAIADGLGSSPIQMALSDDDQSFLKQAADLEASKLAQSSA

XP_022998500.1 uncharacterized protein LOC111493114 [Cucurbita maxima]5.2e-6999.3Show/hide
Query:  MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKN
        MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKN
Subjt:  MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKN

Query:  ILLAIADGLGSSPIQMALSDDDQSFLKQAADLEASKLAQSSA
        ILLAIADGLGSSPIQMALSDDDQSFLKQAADLEASKLAQ SA
Subjt:  ILLAIADGLGSSPIQMALSDDDQSFLKQAADLEASKLAQSSA

XP_023526874.1 uncharacterized protein LOC111790245 [Cucurbita pepo subsp. pepo]1.7e-6492.25Show/hide
Query:  MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKN
        M VVVIDGSTVRNFVNDESHFKKSV++AFA+LDLNNDGVLSR+ELRKAFETLRLIETHFGVDV TPPE+LTQLYDSIFEQFDCDKSG+VDA+EFRTEMKN
Subjt:  MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKN

Query:  ILLAIADGLGSSPIQMALSDDDQSFLKQAADLEASKLAQSSA
        ILLAIADGLGSSPIQMAL D DQSFLKQAADLEASKLAQSSA
Subjt:  ILLAIADGLGSSPIQMALSDDDQSFLKQAADLEASKLAQSSA

XP_038905172.1 uncharacterized protein LOC120091281 [Benincasa hispida]2.3e-6492.91Show/hide
Query:  MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKN
        M VVVIDGSTVRNFVNDESHFKKS+++AFAALDLNNDGVLSR+ELRKAFETLRLIETHFGVDV T PEQLTQLYDSIFEQFDCDKSG+VDADEFRTEMKN
Subjt:  MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKN

Query:  ILLAIADGLGSSPIQMALSDDDQSFLKQAADLEASKLAQSS
        ILLAIADGLGSSPIQMAL D DQSFLKQAADLEASKLAQSS
Subjt:  ILLAIADGLGSSPIQMALSDDDQSFLKQAADLEASKLAQSS

TrEMBL top hitse value%identityAlignment
A0A0A0L9X6 Uncharacterized protein2.1e-6390.78Show/hide
Query:  MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKN
        M VVV+DGSTVRNFVNDESHF KS++DAFA+LDLNNDGVLSR+ELRKAFETLRLIETHFGVDVAT PEQLTQLYDSIFEQFDCDKSG+VDA+EFRTEMKN
Subjt:  MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKN

Query:  ILLAIADGLGSSPIQMALSDDDQSFLKQAADLEASKLAQSS
        ILLAIADGLGSSPIQMAL D DQSFLKQAADLEASKL QSS
Subjt:  ILLAIADGLGSSPIQMALSDDDQSFLKQAADLEASKLAQSS

A0A6J1F6Q4 uncharacterized protein LOC1114413771.1e-6492.25Show/hide
Query:  MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKN
        M VVVIDGSTVRNFVNDESHFKKSV++AFAALDLNNDGVLSR+ELRKAFETLRLIETHFGVDV TPPE+LTQLYDSIFE+FDCDKSG+VDA+EFRTEMKN
Subjt:  MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKN

Query:  ILLAIADGLGSSPIQMALSDDDQSFLKQAADLEASKLAQSSA
        ILLAIADGLGSSPIQMAL D DQSFLKQAADLEASKLAQSSA
Subjt:  ILLAIADGLGSSPIQMALSDDDQSFLKQAADLEASKLAQSSA

A0A6J1GC30 uncharacterized protein LOC1114526146.6e-70100Show/hide
Query:  MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKN
        MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKN
Subjt:  MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKN

Query:  ILLAIADGLGSSPIQMALSDDDQSFLKQAADLEASKLAQSSA
        ILLAIADGLGSSPIQMALSDDDQSFLKQAADLEASKLAQSSA
Subjt:  ILLAIADGLGSSPIQMALSDDDQSFLKQAADLEASKLAQSSA

A0A6J1J7W5 uncharacterized protein LOC1114821603.8e-6592.96Show/hide
Query:  MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKN
        M VVVIDGSTVRNFVNDESHFKKSV++AFAALDLNNDGVLSR+ELRKAFETLRLIETHFGVDV TPPE+LTQLYDSIFEQFDCDKSG+VDA+EFRTEMKN
Subjt:  MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKN

Query:  ILLAIADGLGSSPIQMALSDDDQSFLKQAADLEASKLAQSSA
        ILLAIADGLGSSPIQMAL D DQSFLKQAADLEASKLAQSSA
Subjt:  ILLAIADGLGSSPIQMALSDDDQSFLKQAADLEASKLAQSSA

A0A6J1KCP7 uncharacterized protein LOC1114931142.5e-6999.3Show/hide
Query:  MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKN
        MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKN
Subjt:  MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKN

Query:  ILLAIADGLGSSPIQMALSDDDQSFLKQAADLEASKLAQSSA
        ILLAIADGLGSSPIQMALSDDDQSFLKQAADLEASKLAQ SA
Subjt:  ILLAIADGLGSSPIQMALSDDDQSFLKQAADLEASKLAQSSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein2.6e-1031.4Show/hide
Query:  MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKN
        M   VI   T+  F++D   F+    D F  LDL+ +G+LS +ELR+    +  +E+        P ++   +Y++IFE+F  D    +    FR  +  
Subjt:  MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKN

Query:  ILLAIADGLGSSPIQMALSDD
        IL A+A G+G+SP+ M + +D
Subjt:  ILLAIADGLGSSPIQMALSDD

AT2G44310.1 Calcium-binding EF-hand family protein1.9e-5372.54Show/hide
Query:  MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKN
        M VV+IDGSTVR+FV+DE  FKKSV++ FAALDLN DGVLSR+ELRKAFE++RL+E+HFGVDV TP ++LT LYDSIFE+FD D+SGSVD +EFR+EMK 
Subjt:  MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKN

Query:  ILLAIADGLGSSPIQMALSDDDQSFLKQAADLEASKLAQSSA
        I+LAIADGLGS PI M L DDD +FLK+AADLEASKL ++S+
Subjt:  ILLAIADGLGSSPIQMALSDDDQSFLKQAADLEASKLAQSSA

AT4G38810.2 Calcium-binding EF-hand family protein1.2e-0730.51Show/hide
Query:  VIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKNILLA
        V+DGS +   V +E  F K VE  F  LD + DG LS  EL+ A      I    G+           +Y  +  +F       V   EF+  + +ILL 
Subjt:  VIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKNILLA

Query:  IADGLGSSPIQMALSDDD
        +A GL   PI +   D +
Subjt:  IADGLGSSPIQMALSDDD

AT5G28830.1 calcium-binding EF hand family protein1.5e-1029.41Show/hide
Query:  MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKN
        + V ++DG+ ++ F+ DE  F    E+ F  LD  + G L ++E+RKA         H GV++  PP     + D I ++ D D    +   +F   ++ 
Subjt:  MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKN

Query:  ILLAIADGLGSSPIQMALS
        +L  IAD L   PI + L+
Subjt:  ILLAIADGLGSSPIQMALS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGTGGTCGTAATAGACGGATCGACGGTGAGGAACTTCGTGAACGACGAGTCTCATTTCAAGAAGAGCGTGGAAGATGCATTTGCCGCTCTGGATCTCAACAACGA
CGGTGTTCTCTCTCGAGCGGAGCTCCGCAAGGCCTTCGAGACGCTCCGCCTAATCGAGACTCATTTCGGTGTCGACGTCGCTACTCCGCCAGAGCAATTAACTCAACTCT
ACGATTCTATTTTCGAGCAGTTCGATTGCGACAAAAGCGGAAGCGTCGATGCGGATGAGTTTCGGACGGAGATGAAGAACATCTTGCTCGCAATCGCCGATGGATTAGGC
TCGTCTCCGATTCAGATGGCGCTCAGCGACGACGATCAGAGTTTCCTAAAGCAAGCCGCGGATCTGGAAGCTTCCAAACTCGCTCAATCCTCGGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGGTGGTCGTAATAGACGGATCGACGGTGAGGAACTTCGTGAACGACGAGTCTCATTTCAAGAAGAGCGTGGAAGATGCATTTGCCGCTCTGGATCTCAACAACGA
CGGTGTTCTCTCTCGAGCGGAGCTCCGCAAGGCCTTCGAGACGCTCCGCCTAATCGAGACTCATTTCGGTGTCGACGTCGCTACTCCGCCAGAGCAATTAACTCAACTCT
ACGATTCTATTTTCGAGCAGTTCGATTGCGACAAAAGCGGAAGCGTCGATGCGGATGAGTTTCGGACGGAGATGAAGAACATCTTGCTCGCAATCGCCGATGGATTAGGC
TCGTCTCCGATTCAGATGGCGCTCAGCGACGACGATCAGAGTTTCCTAAAGCAAGCCGCGGATCTGGAAGCTTCCAAACTCGCTCAATCCTCGGCCTGA
Protein sequenceShow/hide protein sequence
MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKNILLAIADGLG
SSPIQMALSDDDQSFLKQAADLEASKLAQSSA