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Carg07320 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07320
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionarabinogalactan peptide 23-like
Genome locationCarg_Chr01:1097031..1097216
RNA-Seq ExpressionCarg07320
SyntenyCarg07320
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044702 - Arabinogalactan protein 23/40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019275.1 Arabinogalactan peptide 23, partial [Cucurbita argyrosperma subsp. argyrosperma]4.7e-1995.08Show/hide
Query:  MEMKKINCAILFAAATVSAVVAHDEAAAPAPGPTSGATAGLPAISSLIGASLLSVAAYYFQ
        MEMKKI CAILFAAATVSAVVAHDEAAAPAPGPTSGATAGLPAI SLIGASLLSVAAYY Q
Subjt:  MEMKKINCAILFAAATVSAVVAHDEAAAPAPGPTSGATAGLPAISSLIGASLLSVAAYYFQ
KAG7036581.1 Arabinogalactan peptide 23, partial [Cucurbita argyrosperma subsp. argyrosperma]6.6e-21100Show/hide
Query:  MEMKKINCAILFAAATVSAVVAHDEAAAPAPGPTSGATAGLPAISSLIGASLLSVAAYYFQ
        MEMKKINCAILFAAATVSAVVAHDEAAAPAPGPTSGATAGLPAISSLIGASLLSVAAYYFQ
Subjt:  MEMKKINCAILFAAATVSAVVAHDEAAAPAPGPTSGATAGLPAISSLIGASLLSVAAYYFQ
XP_022983304.1 arabinogalactan peptide 23-like [Cucurbita maxima]1.7e-1686.89Show/hide
Query:  MEMKKINCAILFAAATVSAVVAHDEAAAPAPGPTSGATAGLPAISSLIGASLLSVAAYYFQ
        MEMKKI CA+LFAAATVSAVVAHDEA APAPGP+SGA AGLPAI S IGASLLSVAAYY Q
Subjt:  MEMKKINCAILFAAATVSAVVAHDEAAAPAPGPTSGATAGLPAISSLIGASLLSVAAYYFQ
XP_022998512.1 arabinogalactan peptide 23-like [Cucurbita maxima]5.2e-1891.8Show/hide
Query:  MEMKKINCAILFAAATVSAVVAHDEAAAPAPGPTSGATAGLPAISSLIGASLLSVAAYYFQ
        MEM KI CAILFAAATVSAVVAHDEAAAPAPGPTSGAT GLPAI SLIGASLLSVAAYY Q
Subjt:  MEMKKINCAILFAAATVSAVVAHDEAAAPAPGPTSGATAGLPAISSLIGASLLSVAAYYFQ
XP_038905644.1 arabinogalactan protein 23-like [Benincasa hispida]1.1e-1583.61Show/hide
Query:  MEMKKINCAILFAAATVSAVVAHDEAAAPAPGPTSGATAGLPAISSLIGASLLSVAAYYFQ
        MEMKKI CA+LFAAATVSA VAHDEA APAPGP+SGA  GLPAI S+IGASLLSVAAYY Q
Subjt:  MEMKKINCAILFAAATVSAVVAHDEAAAPAPGPTSGATAGLPAISSLIGASLLSVAAYYFQ
TrEMBL top hitse value%identityAlignment
A0A5A7U280 Arabinogalactan peptide 231.1e-1381.36Show/hide
Query:  MEMKKINCAILFAAATVSAVVAHDEAAAPAPGPTSGATAGLPAISSLIGASLLSVAAYY
        MEMKKI CAILFAAATVSA VA D+A APAPGP+SGA  GLPAI SL+GASLLS AAYY
Subjt:  MEMKKINCAILFAAATVSAVVAHDEAAAPAPGPTSGATAGLPAISSLIGASLLSVAAYY
A0A6J1F209 arabinogalactan peptide 23-like2.0e-1581.97Show/hide
Query:  MEMKKINCAILFAAATVSAVVAHDEAAAPAPGPTSGATAGLPAISSLIGASLLSVAAYYFQ
        MEMKKI CA+LFAAATV+A VA +EA+APAPGPTS AT GLPAI SLIGASLLSVAAYY Q
Subjt:  MEMKKINCAILFAAATVSAVVAHDEAAAPAPGPTSGATAGLPAISSLIGASLLSVAAYYFQ
A0A6J1HQG2 arabinogalactan peptide 23-like2.0e-1581.97Show/hide
Query:  MEMKKINCAILFAAATVSAVVAHDEAAAPAPGPTSGATAGLPAISSLIGASLLSVAAYYFQ
        MEMKKI CA+LFAAATV+A VA +EA+APAPGPTS AT GLPAI SLIGASLLSVAAYY Q
Subjt:  MEMKKINCAILFAAATVSAVVAHDEAAAPAPGPTSGATAGLPAISSLIGASLLSVAAYYFQ
A0A6J1J6Y9 arabinogalactan peptide 23-like8.1e-1786.89Show/hide
Query:  MEMKKINCAILFAAATVSAVVAHDEAAAPAPGPTSGATAGLPAISSLIGASLLSVAAYYFQ
        MEMKKI CA+LFAAATVSAVVAHDEA APAPGP+SGA AGLPAI S IGASLLSVAAYY Q
Subjt:  MEMKKINCAILFAAATVSAVVAHDEAAAPAPGPTSGATAGLPAISSLIGASLLSVAAYYFQ
A0A6J1K873 arabinogalactan peptide 23-like2.5e-1891.8Show/hide
Query:  MEMKKINCAILFAAATVSAVVAHDEAAAPAPGPTSGATAGLPAISSLIGASLLSVAAYYFQ
        MEM KI CAILFAAATVSAVVAHDEAAAPAPGPTSGAT GLPAI SLIGASLLSVAAYY Q
Subjt:  MEMKKINCAILFAAATVSAVVAHDEAAAPAPGPTSGATAGLPAISSLIGASLLSVAAYYFQ
SwissProt top hitse value%identityAlignment
Q8S2W4 Arabinogalactan protein 237.6e-1262.71Show/hide
Query:  MEMKKINCAILFAAATVSAVVAHDEAAAPAPGPTSGATAGLPAISSLIGASLLSVAAYY
        MEMKKI C +LFAAA+++AV+A +E  APAPGP S A+A LPA+ SL+GASL+S+ +YY
Subjt:  MEMKKINCAILFAAATVSAVVAHDEAAAPAPGPTSGATAGLPAISSLIGASLLSVAAYY
Arabidopsis top hitse value%identityAlignment
AT2G41905.1 BEST Arabidopsis thaliana protein match is: arabinogalactan protein 23 (TAIR:AT3G57690.1)7.3e-1060Show/hide
Query:  MEMKKINCAILFAAATVSAVVAHDEAAAPAPGP-TSGATAGLPAISSLIGASLLSVAAYY
        MEMKKI C ++FAAA+++AV+A  E  APAPGP  SGA+  +PA+ SL+GASL+S+ AYY
Subjt:  MEMKKINCAILFAAATVSAVVAHDEAAAPAPGP-TSGATAGLPAISSLIGASLLSVAAYY
AT3G57690.1 arabinogalactan protein 235.4e-1362.71Show/hide
Query:  MEMKKINCAILFAAATVSAVVAHDEAAAPAPGPTSGATAGLPAISSLIGASLLSVAAYY
        MEMKKI C +LFAAA+++AV+A +E  APAPGP S A+A LPA+ SL+GASL+S+ +YY
Subjt:  MEMKKINCAILFAAATVSAVVAHDEAAAPAPGPTSGATAGLPAISSLIGASLLSVAAYY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATGAAGAAGATCAACTGCGCCATTCTCTTCGCTGCCGCAACGGTCAGCGCCGTCGTTGCTCATGATGAGGCAGCGGCTCCAGCACCTGGACCAACCAGCGGCGC
CACCGCCGGCCTTCCGGCAATCAGCTCTCTCATCGGCGCTTCGTTGCTCTCCGTCGCGGCCTACTACTTCCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATGAAGAAGATCAACTGCGCCATTCTCTTCGCTGCCGCAACGGTCAGCGCCGTCGTTGCTCATGATGAGGCAGCGGCTCCAGCACCTGGACCAACCAGCGGCGC
CACCGCCGGCCTTCCGGCAATCAGCTCTCTCATCGGCGCTTCGTTGCTCTCCGTCGCGGCCTACTACTTCCAGTGA
Protein sequenceShow/hide protein sequence
MEMKKINCAILFAAATVSAVVAHDEAAAPAPGPTSGATAGLPAISSLIGASLLSVAAYYFQ