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Carg07329 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07329
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRNA/RNP complex-1-interacting phosphatase, putative
Genome locationCarg_Chr01:1142303..1142668
RNA-Seq ExpressionCarg07329
SyntenyCarg07329
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048367.1 putative RNA/RNP complex-1-interacting phosphatase [Cucumis melo var. makuwa]2.4e-4680.16Show/hide
Query:  MAALSAGHRYFF----GSAAVHFRNRSISPRSIVLLCLHNQNPSDPSDPSEEKPKKE-QEKKQSIPGFVQRFEKMGIELKEKLSPQRKGDWKDLTLMSLS
        MAALSAGHR+FF    GSA V FRNRSISPRSI +LCLHNQ+PSDP+D S+EK KK+ QE+K+ + GFVQRFEKMGI+LKEKLSPQRKGDWKDLTLMSLS
Subjt:  MAALSAGHRYFF----GSAAVHFRNRSISPRSIVLLCLHNQNPSDPSDPSEEKPKKE-QEKKQSIPGFVQRFEKMGIELKEKLSPQRKGDWKDLTLMSLS

Query:  FAVYVYISQKIVCAYFVWMSMPKQVW
        FAVYVYISQKIVCAYF+WMSMPK +W
Subjt:  FAVYVYISQKIVCAYFVWMSMPKQVW

KAG6581569.1 hypothetical protein SDJN03_21571, partial [Cucurbita argyrosperma subsp. sororia]2.2e-4480.17Show/hide
Query:  MAALSAGHRYFFGSAAVHFRNRSISPRSIVLLCLHNQNPSDPSDPSEEKPKKEQEKKQSIPGFVQRFEKMGIELKEKLSPQRKGDWKDLTLMSLSFAVYV
        MAALSAGHR+FF   AV F NRSISPR IVLLC HN N  DPSD SEEK KK+QE KQ +PGF+QR++KMG+ELKEKLSPQRKGDWKD+TLMSLSFAVYV
Subjt:  MAALSAGHRYFFGSAAVHFRNRSISPRSIVLLCLHNQNPSDPSDPSEEKPKKEQEKKQSIPGFVQRFEKMGIELKEKLSPQRKGDWKDLTLMSLSFAVYV

Query:  YISQKIVCAYFVWMSMPKQVW
        YISQKIVCAYF+WMSMPKQ+W
Subjt:  YISQKIVCAYFVWMSMPKQVW

KAG6606884.1 hypothetical protein SDJN03_00226, partial [Cucurbita argyrosperma subsp. sororia]2.2e-60100Show/hide
Query:  MAALSAGHRYFFGSAAVHFRNRSISPRSIVLLCLHNQNPSDPSDPSEEKPKKEQEKKQSIPGFVQRFEKMGIELKEKLSPQRKGDWKDLTLMSLSFAVYV
        MAALSAGHRYFFGSAAVHFRNRSISPRSIVLLCLHNQNPSDPSDPSEEKPKKEQEKKQSIPGFVQRFEKMGIELKEKLSPQRKGDWKDLTLMSLSFAVYV
Subjt:  MAALSAGHRYFFGSAAVHFRNRSISPRSIVLLCLHNQNPSDPSDPSEEKPKKEQEKKQSIPGFVQRFEKMGIELKEKLSPQRKGDWKDLTLMSLSFAVYV

Query:  YISQKIVCAYFVWMSMPKQVW
        YISQKIVCAYFVWMSMPKQVW
Subjt:  YISQKIVCAYFVWMSMPKQVW

KGN58582.1 hypothetical protein Csa_001602 [Cucumis sativus]1.5e-4579.37Show/hide
Query:  MAALSAGHRYFF----GSAAVHFRNRSISPRSIVLLCLHNQNPSDPSDPSEEKPKKE-QEKKQSIPGFVQRFEKMGIELKEKLSPQRKGDWKDLTLMSLS
        MAALSAGHR+FF    GSA + FRNRSISPRSI +LCLHNQ+PSDP+D SEEK KK+ QE+K+ + GFVQRFEKMGI+LKEKLSPQRKGDWKDLTLMSLS
Subjt:  MAALSAGHRYFF----GSAAVHFRNRSISPRSIVLLCLHNQNPSDPSDPSEEKPKKE-QEKKQSIPGFVQRFEKMGIELKEKLSPQRKGDWKDLTLMSLS

Query:  FAVYVYISQKIVCAYFVWMSMPKQVW
        FAVYVYISQKIVCAYF+WM+MPK +W
Subjt:  FAVYVYISQKIVCAYFVWMSMPKQVW

XP_022152649.1 uncharacterized protein LOC111020315 [Momordica charantia]4.5e-3773.77Show/hide
Query:  MAALSAGHRYFF--GSAAVHFRNRSISPRSIVLLCLHNQNPSDPSDPSEEKPKK-EQEKKQSIPGFVQRFEKMGIELKEKLSPQRKGDWKDLTLMSLSFA
        MAALSAGHR+FF  G+AA   R R  SP+SIVLLC H+Q      DPSEE  K+ E+ K+Q I GFV+RFEKMG+ELKEKLSPQRKGDWKD+ LMSLSFA
Subjt:  MAALSAGHRYFF--GSAAVHFRNRSISPRSIVLLCLHNQNPSDPSDPSEEKPKK-EQEKKQSIPGFVQRFEKMGIELKEKLSPQRKGDWKDLTLMSLSFA

Query:  VYVYISQKIVCAYFVWMSMPKQ
        VYVYISQKIVCAYFVWMSMPKQ
Subjt:  VYVYISQKIVCAYFVWMSMPKQ

TrEMBL top hitse value%identityAlignment
A0A0A0LD14 Uncharacterized protein7.4e-4679.37Show/hide
Query:  MAALSAGHRYFF----GSAAVHFRNRSISPRSIVLLCLHNQNPSDPSDPSEEKPKKE-QEKKQSIPGFVQRFEKMGIELKEKLSPQRKGDWKDLTLMSLS
        MAALSAGHR+FF    GSA + FRNRSISPRSI +LCLHNQ+PSDP+D SEEK KK+ QE+K+ + GFVQRFEKMGI+LKEKLSPQRKGDWKDLTLMSLS
Subjt:  MAALSAGHRYFF----GSAAVHFRNRSISPRSIVLLCLHNQNPSDPSDPSEEKPKKE-QEKKQSIPGFVQRFEKMGIELKEKLSPQRKGDWKDLTLMSLS

Query:  FAVYVYISQKIVCAYFVWMSMPKQVW
        FAVYVYISQKIVCAYF+WM+MPK +W
Subjt:  FAVYVYISQKIVCAYFVWMSMPKQVW

A0A5B7BW37 Uncharacterized protein1.4e-2353.72Show/hide
Query:  MAALSAGHRYFFGSAAVHFRNRSISPRSIVLLCLHNQNPSDPSDPSEEKPKKEQEKKQSIPGFVQRFEKMGIELKEKLSPQRKGDWKDLTLMSLSFAVYV
        MAALS GH +   ++++       +PR ++ +   ++ P DP  P E K +KE+EKKQS+  F    EK+G  LKE LSP++KGDWKD+ LMSLSFAVYV
Subjt:  MAALSAGHRYFFGSAAVHFRNRSISPRSIVLLCLHNQNPSDPSDPSEEKPKKEQEKKQSIPGFVQRFEKMGIELKEKLSPQRKGDWKDLTLMSLSFAVYV

Query:  YISQKIVCAYFVWMSMPKQVW
        YISQKIVCAY  WMSM KQ W
Subjt:  YISQKIVCAYFVWMSMPKQVW

A0A5D3BX35 Putative RNA/RNP complex-1-interacting phosphatase1.1e-4680.16Show/hide
Query:  MAALSAGHRYFF----GSAAVHFRNRSISPRSIVLLCLHNQNPSDPSDPSEEKPKKE-QEKKQSIPGFVQRFEKMGIELKEKLSPQRKGDWKDLTLMSLS
        MAALSAGHR+FF    GSA V FRNRSISPRSI +LCLHNQ+PSDP+D S+EK KK+ QE+K+ + GFVQRFEKMGI+LKEKLSPQRKGDWKDLTLMSLS
Subjt:  MAALSAGHRYFF----GSAAVHFRNRSISPRSIVLLCLHNQNPSDPSDPSEEKPKKE-QEKKQSIPGFVQRFEKMGIELKEKLSPQRKGDWKDLTLMSLS

Query:  FAVYVYISQKIVCAYFVWMSMPKQVW
        FAVYVYISQKIVCAYF+WMSMPK +W
Subjt:  FAVYVYISQKIVCAYFVWMSMPKQVW

A0A660KVF0 Uncharacterized protein2.3e-2353.6Show/hide
Query:  MAALSAGHRYFFGSAAVHFRNRSISPRSIVLLCLHNQNPSDPSDPSEEKPKKEQEKKQSIPGFVQR----FEKMGIELKEKLSPQRKGDWKDLTLMSLSF
        MAALS GH +           +S SP +++L C     P D S+P   + KKE+ K++ +   +QR    FEK G  L+E LSP++KGDWKDLTLMSLSF
Subjt:  MAALSAGHRYFFGSAAVHFRNRSISPRSIVLLCLHNQNPSDPSDPSEEKPKKEQEKKQSIPGFVQR----FEKMGIELKEKLSPQRKGDWKDLTLMSLSF

Query:  AVYVYISQKIVCAYFVWMSMPKQVW
        AVYVYISQK+VCAYF WMSMPKQ+W
Subjt:  AVYVYISQKIVCAYFVWMSMPKQVW

A0A6J1DGN1 uncharacterized protein LOC1110203152.2e-3773.77Show/hide
Query:  MAALSAGHRYFF--GSAAVHFRNRSISPRSIVLLCLHNQNPSDPSDPSEEKPKK-EQEKKQSIPGFVQRFEKMGIELKEKLSPQRKGDWKDLTLMSLSFA
        MAALSAGHR+FF  G+AA   R R  SP+SIVLLC H+Q      DPSEE  K+ E+ K+Q I GFV+RFEKMG+ELKEKLSPQRKGDWKD+ LMSLSFA
Subjt:  MAALSAGHRYFF--GSAAVHFRNRSISPRSIVLLCLHNQNPSDPSDPSEEKPKK-EQEKKQSIPGFVQRFEKMGIELKEKLSPQRKGDWKDLTLMSLSFA

Query:  VYVYISQKIVCAYFVWMSMPKQ
        VYVYISQKIVCAYFVWMSMPKQ
Subjt:  VYVYISQKIVCAYFVWMSMPKQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52070.1 unknown protein1.4e-0948.68Show/hide
Query:  KPKKEQEKKQSIPGFVQRFEKMGIELKEKLSPQ-RKGDWKDLTLMSLSFAVYVYISQKIVCAYFVW--MSMPKQVW
        K K  +E +  I   ++R      ++ + L P+ +KGD KDL LMSLSFAVYVYISQ +VCAYF W  +S PK  W
Subjt:  KPKKEQEKKQSIPGFVQRFEKMGIELKEKLSPQ-RKGDWKDLTLMSLSFAVYVYISQKIVCAYFVW--MSMPKQVW

AT3G52070.2 unknown protein1.2e-0849.32Show/hide
Query:  KPKKEQEKKQSIPGFVQRFEKMGIELKEKLSPQ-RKGDWKDLTLMSLSFAVYVYISQKIVCAYFVW--MSMPK
        K K  +E +  I   ++R      ++ + L P+ +KGD KDL LMSLSFAVYVYISQ +VCAYF W  +S PK
Subjt:  KPKKEQEKKQSIPGFVQRFEKMGIELKEKLSPQ-RKGDWKDLTLMSLSFAVYVYISQKIVCAYFVW--MSMPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCCTCTCCGCCGGCCACCGCTATTTCTTCGGCTCCGCCGCCGTGCATTTCAGAAACAGAAGCATCAGCCCCAGATCGATCGTCCTCCTCTGCCTCCATAACCA
AAACCCTTCAGATCCTTCAGATCCTTCAGAAGAAAAGCCGAAGAAAGAGCAAGAAAAAAAACAGTCGATTCCAGGGTTTGTTCAGAGATTCGAGAAGATGGGAATAGAAT
TGAAGGAGAAATTAAGCCCTCAGAGAAAAGGAGACTGGAAAGATTTGACATTGATGAGCCTTTCATTTGCTGTTTATGTATATATTTCTCAGAAGATTGTCTGTGCTTAT
TTTGTTTGGATGTCAATGCCAAAGCAAGTATGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCCCTCTCCGCCGGCCACCGCTATTTCTTCGGCTCCGCCGCCGTGCATTTCAGAAACAGAAGCATCAGCCCCAGATCGATCGTCCTCCTCTGCCTCCATAACCA
AAACCCTTCAGATCCTTCAGATCCTTCAGAAGAAAAGCCGAAGAAAGAGCAAGAAAAAAAACAGTCGATTCCAGGGTTTGTTCAGAGATTCGAGAAGATGGGAATAGAAT
TGAAGGAGAAATTAAGCCCTCAGAGAAAAGGAGACTGGAAAGATTTGACATTGATGAGCCTTTCATTTGCTGTTTATGTATATATTTCTCAGAAGATTGTCTGTGCTTAT
TTTGTTTGGATGTCAATGCCAAAGCAAGTATGGTAG
Protein sequenceShow/hide protein sequence
MAALSAGHRYFFGSAAVHFRNRSISPRSIVLLCLHNQNPSDPSDPSEEKPKKEQEKKQSIPGFVQRFEKMGIELKEKLSPQRKGDWKDLTLMSLSFAVYVYISQKIVCAY
FVWMSMPKQVW