; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg07332 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07332
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionWD_REPEATS_REGION domain-containing protein
Genome locationCarg_Chr01:1154727..1159404
RNA-Seq ExpressionCarg07332
SyntenyCarg07332
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606887.1 hypothetical protein SDJN03_00229, partial [Cucurbita argyrosperma subsp. sororia]5.5e-5599.11Show/hide
Query:  MATKMDVEHKEAISNVMILTDPEGAPLGAPIDLPQNAGPQQLRQMVNKLLNKMEKPYPQLYQATGSKHSTTIFWLQKCRKELESQLQIQPQDSERGSPQR
        MATKMDVEHKEAISNVMILTDPEGAPLGAPIDLPQNAGPQQLRQMVNKLLNKMEKPYPQLYQATGSKHSTTIFWLQKCRKELESQLQIQPQDSERGSPQR
Subjt:  MATKMDVEHKEAISNVMILTDPEGAPLGAPIDLPQNAGPQQLRQMVNKLLNKMEKPYPQLYQATGSKHSTTIFWLQKCRKELESQLQIQPQDSERGSPQR

Query:  PGFPAKDEAGKL
        PGFPAKDEAGK+
Subjt:  PGFPAKDEAGKL

KAG7036593.1 hypothetical protein SDJN02_00212, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-231100Show/hide
Query:  MATKMDVEHKEAISNVMILTDPEGAPLGAPIDLPQNAGPQQLRQMVNKLLNKMEKPYPQLYQATGSKHSTTIFWLQKCRKELESQLQIQPQDSERGSPQR
        MATKMDVEHKEAISNVMILTDPEGAPLGAPIDLPQNAGPQQLRQMVNKLLNKMEKPYPQLYQATGSKHSTTIFWLQKCRKELESQLQIQPQDSERGSPQR
Subjt:  MATKMDVEHKEAISNVMILTDPEGAPLGAPIDLPQNAGPQQLRQMVNKLLNKMEKPYPQLYQATGSKHSTTIFWLQKCRKELESQLQIQPQDSERGSPQR

Query:  PGFPAKDEAGKLGGMGPENLLFERSRYDNSIRSKTCNEPRFVSAGIAPENAFDLKIWKISSNPRRNTTDKTIIPKIQSFQIGEILERWWELSTRDRKTRF
        PGFPAKDEAGKLGGMGPENLLFERSRYDNSIRSKTCNEPRFVSAGIAPENAFDLKIWKISSNPRRNTTDKTIIPKIQSFQIGEILERWWELSTRDRKTRF
Subjt:  PGFPAKDEAGKLGGMGPENLLFERSRYDNSIRSKTCNEPRFVSAGIAPENAFDLKIWKISSNPRRNTTDKTIIPKIQSFQIGEILERWWELSTRDRKTRF

Query:  GIASPIFFGIEPENMLFESLSETISKLGRGIGPSKRLELKSTSAKGAIFSGSRCSRLKSGRAGLQFSVPSRNSVKSTTEREVKLTVKGDEMAPDKPQSLK
        GIASPIFFGIEPENMLFESLSETISKLGRGIGPSKRLELKSTSAKGAIFSGSRCSRLKSGRAGLQFSVPSRNSVKSTTEREVKLTVKGDEMAPDKPQSLK
Subjt:  GIASPIFFGIEPENMLFESLSETISKLGRGIGPSKRLELKSTSAKGAIFSGSRCSRLKSGRAGLQFSVPSRNSVKSTTEREVKLTVKGDEMAPDKPQSLK

Query:  CNSVKNLSLLNILNQSGFTVERSMLSIARYFKDTSPATHSRLSRTKPKFSISRYCKLEMLPKLGGSKPPKPAFDRFKYCNFFKEPKNSGTGISLNVKSNL
        CNSVKNLSLLNILNQSGFTVERSMLSIARYFKDTSPATHSRLSRTKPKFSISRYCKLEMLPKLGGSKPPKPAFDRFKYCNFFKEPKNSGTGISLNVKSNL
Subjt:  CNSVKNLSLLNILNQSGFTVERSMLSIARYFKDTSPATHSRLSRTKPKFSISRYCKLEMLPKLGGSKPPKPAFDRFKYCNFFKEPKNSGTGISLNVKSNL

Query:  CISFRI
        CISFRI
Subjt:  CISFRI

XP_004149723.1 notchless protein homolog [Cucumis sativus]8.8e-1352.63Show/hide
Query:  MATKMDVEHKEAISNVMI-LTDPEGAPLGAPIDLPQNAGPQQLRQMVNKLLNKMEKPYPQLYQATGSKHSTTI-FWLQKCRKELESQLQI--QPQ
        MAT+MD+EH+E  +NVMI LTDPEG PLGAP+ LPQNAGPQQL+QMVNKLL+  EK  P  +  +  + + ++  +L+K +  +E  L +  QPQ
Subjt:  MATKMDVEHKEAISNVMI-LTDPEGAPLGAPIDLPQNAGPQQLRQMVNKLLNKMEKPYPQLYQATGSKHSTTI-FWLQKCRKELESQLQI--QPQ

XP_022152686.1 notchless protein homolog [Momordica charantia]1.5e-1254.26Show/hide
Query:  MATKMDVEHKEAISNVMI-LTDPEGAPLGAPIDLPQNAGPQQLRQMVNKLLNKMEKPYPQLYQATGSKHSTTIFWLQKCRKELESQLQI--QPQ
        MA++MDVE +E I+NVMI LTDPEG PLGAP+ LPQNAGPQQL+QMVNKLLN  EK     Y +      +   +L+K +  +E  L +  QPQ
Subjt:  MATKMDVEHKEAISNVMI-LTDPEGAPLGAPIDLPQNAGPQQLRQMVNKLLNKMEKPYPQLYQATGSKHSTTIFWLQKCRKELESQLQI--QPQ

XP_038905776.1 notchless protein homolog [Benincasa hispida]1.8e-1355.32Show/hide
Query:  MATKMDVEHKEAISNVMI-LTDPEGAPLGAPIDLPQNAGPQQLRQMVNKLLNKMEKPYPQLYQATGSKHSTTIFWLQKCRKELESQLQI--QPQ
        MA +MDVEH+E I+NVMI LTDPEG PLGAP+ LPQNAGPQQL+QMVNKLLN  EK     Y +      +   +L+K +  +E  L +  QPQ
Subjt:  MATKMDVEHKEAISNVMI-LTDPEGAPLGAPIDLPQNAGPQQLRQMVNKLLNKMEKPYPQLYQATGSKHSTTIFWLQKCRKELESQLQI--QPQ

TrEMBL top hitse value%identityAlignment
A0A0A0LET9 WD_REPEATS_REGION domain-containing protein4.3e-1352.63Show/hide
Query:  MATKMDVEHKEAISNVMI-LTDPEGAPLGAPIDLPQNAGPQQLRQMVNKLLNKMEKPYPQLYQATGSKHSTTI-FWLQKCRKELESQLQI--QPQ
        MAT+MD+EH+E  +NVMI LTDPEG PLGAP+ LPQNAGPQQL+QMVNKLL+  EK  P  +  +  + + ++  +L+K +  +E  L +  QPQ
Subjt:  MATKMDVEHKEAISNVMI-LTDPEGAPLGAPIDLPQNAGPQQLRQMVNKLLNKMEKPYPQLYQATGSKHSTTI-FWLQKCRKELESQLQI--QPQ

A0A1S3CGX2 notchless protein homolog4.3e-1352.63Show/hide
Query:  MATKMDVEHKEAISNVMI-LTDPEGAPLGAPIDLPQNAGPQQLRQMVNKLLNKMEKPYPQLYQATGSKHSTTI-FWLQKCRKELESQLQI--QPQ
        MAT+MD+EH+E  +NVMI LTDPEG PLGAP+ LPQNAGPQQL+QMVNKLL+  EK  P  +  +  + + ++  +L+K +  +E  L +  QPQ
Subjt:  MATKMDVEHKEAISNVMI-LTDPEGAPLGAPIDLPQNAGPQQLRQMVNKLLNKMEKPYPQLYQATGSKHSTTI-FWLQKCRKELESQLQI--QPQ

A0A2N9HRJ7 LRRNT_2 domain-containing protein1.8e-1953.92Show/hide
Query:  KPQSLKCNSVKNLSLLNILNQSGFTVERSMLSIARYFKDTSPATHSRLSRTKPKFSISRYCKLEMLPKLGGSKPPKPAFDRFKYCNFFKEPKNSGTGISL
        +PQ  +CNSVK  SL N+  QS  ++ERS   I R F++T PA HSRLS TK ++  SRY KLE  PK GG  P  PA DR +YC F K+PKN+G G+ L
Subjt:  KPQSLKCNSVKNLSLLNILNQSGFTVERSMLSIARYFKDTSPATHSRLSRTKPKFSISRYCKLEMLPKLGGSKPPKPAFDRFKYCNFFKEPKNSGTGISL

Query:  NV
        NV
Subjt:  NV

A0A6J1DIH2 notchless protein homolog7.3e-1354.26Show/hide
Query:  MATKMDVEHKEAISNVMI-LTDPEGAPLGAPIDLPQNAGPQQLRQMVNKLLNKMEKPYPQLYQATGSKHSTTIFWLQKCRKELESQLQI--QPQ
        MA++MDVE +E I+NVMI LTDPEG PLGAP+ LPQNAGPQQL+QMVNKLLN  EK     Y +      +   +L+K +  +E  L +  QPQ
Subjt:  MATKMDVEHKEAISNVMI-LTDPEGAPLGAPIDLPQNAGPQQLRQMVNKLLNKMEKPYPQLYQATGSKHSTTIFWLQKCRKELESQLQI--QPQ

A0A6J1J2A5 notchless protein homolog1.2e-1254.26Show/hide
Query:  MATKMDVEHKEAISNVMI-LTDPEGAPLGAPIDLPQNAGPQQLRQMVNKLLNKMEKPYPQLYQATGSKHSTTIFWLQKCRKELESQLQI--QPQ
        MAT+MDVE +E I+NVMI LTDPEG PLGAP+ LPQNAGPQQL+QMVNKLL+  EK     Y +      +   +L+K +  +E  L +  QPQ
Subjt:  MATKMDVEHKEAISNVMI-LTDPEGAPLGAPIDLPQNAGPQQLRQMVNKLLNKMEKPYPQLYQATGSKHSTTIFWLQKCRKELESQLQI--QPQ

SwissProt top hitse value%identityAlignment
Q9FLX9 Notchless protein homolog7.8e-0444.64Show/hide
Query:  TKMDVEHKEAISNVMILTDPEGAPLGAPIDLPQNAGPQQLRQMVNKLLNKMEK-PY
        T MD +  + +  + +LTDPEG  LG+ + +PQ AGP QL Q+VN+ L+  E  PY
Subjt:  TKMDVEHKEAISNVMILTDPEGAPLGAPIDLPQNAGPQQLRQMVNKLLNKMEK-PY

Arabidopsis top hitse value%identityAlignment
AT5G52820.1 WD-40 repeat family protein / notchless protein, putative5.5e-0544.64Show/hide
Query:  TKMDVEHKEAISNVMILTDPEGAPLGAPIDLPQNAGPQQLRQMVNKLLNKMEK-PY
        T MD +  + +  + +LTDPEG  LG+ + +PQ AGP QL Q+VN+ L+  E  PY
Subjt:  TKMDVEHKEAISNVMILTDPEGAPLGAPIDLPQNAGPQQLRQMVNKLLNKMEK-PY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACGAAGATGGATGTAGAGCACAAGGAAGCTATCAGCAATGTCATGATCCTCACGGACCCCGAAGGCGCGCCTTTGGGAGCTCCCATTGATCTTCCCCAAAATGC
AGGGCCTCAGCAGCTTCGGCAAATGGTCAATAAGCTTCTCAACAAGATGGAGAAACCTTACCCACAACTTTATCAAGCAACTGGAAGTAAGCATTCGACCACGATCTTTT
GGCTGCAAAAATGCAGAAAGGAACTAGAATCCCAGCTGCAAATCCAACCCCAAGACTCAGAAAGGGGTTCTCCACAGAGACCAGGATTTCCAGCAAAAGATGAAGCGGGA
AAGCTTGGAGGAATGGGACCTGAGAACCTGTTGTTTGAAAGATCAAGATATGATAATTCTATCAGGTCCAAGACTTGCAACGAGCCAAGATTTGTGAGTGCAGGAATCGC
TCCGGAAAATGCATTTGACCTTAAGATTTGGAAAATTAGTTCCAATCCAAGGAGGAATACTACCGACAAGACCATTATTCCCAAGATTCAGAGTTTCCAGATTGGAGAGA
TTTTGGAAAGATGGTGGGAGCTTTCCACCAGAGACAGAAAGACCAGGTTCGGCATTGCCTCACCTATATTCTTTGGTATTGAACCCGAGAATATGTTATTTGAAAGTTTG
AGTGAAACAATCTCAAAGCTTGGAAGAGGAATAGGTCCTTCAAAGAGATTGGAGCTGAAATCAACATCTGCAAAGGGAGCTATTTTCAGCGGATCTAGATGCTCCAGGCT
AAAGAGTGGACGAGCTGGATTGCAGTTTTCAGTTCCTTCAAGAAATTCAGTTAAATCAACGACAGAGAGAGAAGTGAAGTTGACTGTCAAGGGAGATGAAATGGCACCGG
ATAAGCCACAATCACTCAAATGCAACTCAGTTAAGAATCTAAGCCTGCTCAATATCTTAAACCAGTCTGGTTTCACTGTGGAAAGATCCATGTTATCCATCGCAAGATAC
TTCAAGGACACAAGCCCAGCTACCCATTCAAGATTATCAAGAACTAAACCCAAATTCTCCATATCAAGATATTGCAAGCTAGAAATGTTACCCAAACTTGGAGGAAGTAA
ACCACCAAAGCCAGCATTTGATAGGTTCAAATACTGCAACTTCTTCAAAGAGCCAAAGAATTCAGGAACTGGAATATCATTGAATGTAAAGTCAAATCTATGTATAAGTT
TTAGAATATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTACGAAGATGGATGTAGAGCACAAGGAAGCTATCAGCAATGTCATGATCCTCACGGACCCCGAAGGCGCGCCTTTGGGAGCTCCCATTGATCTTCCCCAAAATGC
AGGGCCTCAGCAGCTTCGGCAAATGGTCAATAAGCTTCTCAACAAGATGGAGAAACCTTACCCACAACTTTATCAAGCAACTGGAAGTAAGCATTCGACCACGATCTTTT
GGCTGCAAAAATGCAGAAAGGAACTAGAATCCCAGCTGCAAATCCAACCCCAAGACTCAGAAAGGGGTTCTCCACAGAGACCAGGATTTCCAGCAAAAGATGAAGCGGGA
AAGCTTGGAGGAATGGGACCTGAGAACCTGTTGTTTGAAAGATCAAGATATGATAATTCTATCAGGTCCAAGACTTGCAACGAGCCAAGATTTGTGAGTGCAGGAATCGC
TCCGGAAAATGCATTTGACCTTAAGATTTGGAAAATTAGTTCCAATCCAAGGAGGAATACTACCGACAAGACCATTATTCCCAAGATTCAGAGTTTCCAGATTGGAGAGA
TTTTGGAAAGATGGTGGGAGCTTTCCACCAGAGACAGAAAGACCAGGTTCGGCATTGCCTCACCTATATTCTTTGGTATTGAACCCGAGAATATGTTATTTGAAAGTTTG
AGTGAAACAATCTCAAAGCTTGGAAGAGGAATAGGTCCTTCAAAGAGATTGGAGCTGAAATCAACATCTGCAAAGGGAGCTATTTTCAGCGGATCTAGATGCTCCAGGCT
AAAGAGTGGACGAGCTGGATTGCAGTTTTCAGTTCCTTCAAGAAATTCAGTTAAATCAACGACAGAGAGAGAAGTGAAGTTGACTGTCAAGGGAGATGAAATGGCACCGG
ATAAGCCACAATCACTCAAATGCAACTCAGTTAAGAATCTAAGCCTGCTCAATATCTTAAACCAGTCTGGTTTCACTGTGGAAAGATCCATGTTATCCATCGCAAGATAC
TTCAAGGACACAAGCCCAGCTACCCATTCAAGATTATCAAGAACTAAACCCAAATTCTCCATATCAAGATATTGCAAGCTAGAAATGTTACCCAAACTTGGAGGAAGTAA
ACCACCAAAGCCAGCATTTGATAGGTTCAAATACTGCAACTTCTTCAAAGAGCCAAAGAATTCAGGAACTGGAATATCATTGAATGTAAAGTCAAATCTATGTATAAGTT
TTAGAATATAG
Protein sequenceShow/hide protein sequence
MATKMDVEHKEAISNVMILTDPEGAPLGAPIDLPQNAGPQQLRQMVNKLLNKMEKPYPQLYQATGSKHSTTIFWLQKCRKELESQLQIQPQDSERGSPQRPGFPAKDEAG
KLGGMGPENLLFERSRYDNSIRSKTCNEPRFVSAGIAPENAFDLKIWKISSNPRRNTTDKTIIPKIQSFQIGEILERWWELSTRDRKTRFGIASPIFFGIEPENMLFESL
SETISKLGRGIGPSKRLELKSTSAKGAIFSGSRCSRLKSGRAGLQFSVPSRNSVKSTTEREVKLTVKGDEMAPDKPQSLKCNSVKNLSLLNILNQSGFTVERSMLSIARY
FKDTSPATHSRLSRTKPKFSISRYCKLEMLPKLGGSKPPKPAFDRFKYCNFFKEPKNSGTGISLNVKSNLCISFRI