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Carg07403 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07403
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionmitochondrial zinc maintenance protein 1, mitochondrial
Genome locationCarg_Chr01:1573875..1575830
RNA-Seq ExpressionCarg07403
SyntenyCarg07403
Gene Ontology termsGO:0004386 - helicase activity (molecular function)
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606961.1 hypothetical protein SDJN03_00303, partial [Cucurbita argyrosperma subsp. sororia]7.0e-47100Show/hide
Query:  MVRGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEEL
        MVRGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEEL
Subjt:  MVRGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEEL

Query:  LRRSK
        LRRSK
Subjt:  LRRSK
KAG7036663.1 MZM1 [Cucurbita argyrosperma subsp. argyrosperma]7.0e-47100Show/hide
Query:  MVRGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEEL
        MVRGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEEL
Subjt:  MVRGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEEL

Query:  LRRSK
        LRRSK
Subjt:  LRRSK
XP_022949021.1 mitochondrial zinc maintenance protein 1, mitochondrial [Cucurbita moschata]1.6e-4699.05Show/hide
Query:  MVRGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEEL
        MV+GEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEEL
Subjt:  MVRGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEEL

Query:  LRRSK
        LRRSK
Subjt:  LRRSK
XP_022998533.1 mitochondrial zinc maintenance protein 1, mitochondrial [Cucurbita maxima]1.3e-4598.1Show/hide
Query:  MVRGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEEL
        MV+GEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQAKLTSRGGYEMK SKEHAGATLEVPSEEL
Subjt:  MVRGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEEL

Query:  LRRSK
        LRRSK
Subjt:  LRRSK
XP_038905396.1 mitochondrial zinc maintenance protein 1, mitochondrial [Benincasa hispida]5.2e-4292.23Show/hide
Query:  VRGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEELL
        ++GEVLSAYRALLRATKKSFAGDTLML ESA+EVRRKFEESRHVTS+ EIRKLLEEAREASHFISNMIVQAKLTSRGGYEMKPSK+HAGATLEVPSEELL
Subjt:  VRGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEELL

Query:  RRS
        R+S
Subjt:  RRS
TrEMBL top hitse value%identityAlignment
A0A0A0KY80 Uncharacterized protein3.3e-4288.46Show/hide
Query:  VRGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEELL
        ++GEVLSAYR+LLRATK+SFAGDTLML ESA+E+RRKF+ESRHVTS+PEIRKLLEEAREASHFISNMIVQAKLTSRGGYEMKPSK+HAGATLEVP+EELL
Subjt:  VRGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEELL

Query:  RRSK
        R+SK
Subjt:  RRSK
A0A1S3BYH1 mitochondrial zinc maintenance protein 1, mitochondrial2.8e-4188.46Show/hide
Query:  VRGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEELL
        ++GEVLSAYR+LLRATKKSFAGDTLML ESA+E+RRKF+ESRHVTS+ EIRKLLEEAREASHFISNMIVQAK TSRGGYEMKPSK+HAGATLEVPSEELL
Subjt:  VRGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEELL

Query:  RRSK
        R+SK
Subjt:  RRSK
A0A6J1DPV6 mitochondrial zinc maintenance protein 1, mitochondrial2.5e-4293.2Show/hide
Query:  VRGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEELL
        +RGEVLSAYRALLRAT KSFAGDTLML ESAAEVRRKFEESRHVTS+ EIRKLLEEAREASHFISNMIVQAKLTSRGGYEMKPSK+HAGATLEVPSEELL
Subjt:  VRGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEELL

Query:  RRS
        R+S
Subjt:  RRS
A0A6J1GAU2 mitochondrial zinc maintenance protein 1, mitochondrial7.6e-4799.05Show/hide
Query:  MVRGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEEL
        MV+GEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEEL
Subjt:  MVRGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEEL

Query:  LRRSK
        LRRSK
Subjt:  LRRSK
A0A6J1KH11 mitochondrial zinc maintenance protein 1, mitochondrial6.4e-4698.1Show/hide
Query:  MVRGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEEL
        MV+GEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQAKLTSRGGYEMK SKEHAGATLEVPSEEL
Subjt:  MVRGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEEL

Query:  LRRSK
        LRRSK
Subjt:  LRRSK
SwissProt top hitse value%identityAlignment
C4Y4R9 Mitochondrial zinc maintenance protein 1, mitochondrial7.7e-0432Show/hide
Query:  LSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQA-KLTSRGGYEMKPSKEHAGATLEVPSEELLRRSK
        L AYR  LRAT+ +F GD  +LK + A++R     +R +    E+ K + E  E + F+   IVQ  K   +  Y +K   +      E+ S E +++SK
Subjt:  LSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQA-KLTSRGGYEMKPSKEHAGATLEVPSEELLRRSK
C5FGP0 Mitochondrial zinc maintenance protein 1, mitochondrial5.9e-0440Show/hide
Query:  LSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQ
        +SAYR LLRAT+ +F GD  +L  + AE R++F++SR    D  ++  ++ A E +H + + IVQ
Subjt:  LSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQ
Q5A7N3 Mitochondrial zinc maintenance protein 1, mitochondrial1.0e-0332Show/hide
Query:  VLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQAKLTSRGGY
        VLSAYR  LRATK +F  D  +L+ +  ++++   ++ ++ + PEI + +++  E + F+   IVQ +    G Y
Subjt:  VLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQAKLTSRGGY
Arabidopsis top hitse value%identityAlignment
AT3G62810.1 complex 1 family protein / LVR family protein2.3e-3574.76Show/hide
Query:  MVRGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEEL
        MV GE L AYRALLRATKKSFAGDT MLK SA+E+R+KFEE+R V S+ +I +LLEEAREA+ FIS MIVQAKL  RGGYEMK S+EHAGATLE+PSEE+
Subjt:  MVRGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEEL

Query:  LRR
        LR+
Subjt:  LRR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGAGGGGAAGTTCTAAGCGCCTACAGAGCGTTGCTCAGGGCAACCAAGAAGTCTTTCGCCGGCGATACCTTGATGCTGAAGGAGTCCGCTGCTGAGGTTCGTCG
GAAGTTCGAAGAGAGCCGCCATGTGACTTCAGATCCCGAGATTCGTAAATTGCTCGAAGAAGCTCGGGAGGCCTCCCATTTCATCTCTAATATGATCGTTCAGGCCAAGC
TCACTTCTCGCGGCGGCTATGAAATGAAGCCGAGTAAAGAACATGCTGGTGCTACACTAGAAGTTCCTTCTGAGGAGCTTCTGCGCAGATCTAAATGA
mRNA sequenceShow/hide mRNA sequence
AAAAAGACATTGACTACTTTATTGGACATGAAAATAGGGCATTTGAATGAAACGACGTCGTCGCCTTTTTTGGGCGTCTTTGTTAGTGAGGAGCGGAGAAGCTCATTTCA
AGAGGGATGGTGAGAGGGGAAGTTCTAAGCGCCTACAGAGCGTTGCTCAGGGCAACCAAGAAGTCTTTCGCCGGCGATACCTTGATGCTGAAGGAGTCCGCTGCTGAGGT
TCGTCGGAAGTTCGAAGAGAGCCGCCATGTGACTTCAGATCCCGAGATTCGTAAATTGCTCGAAGAAGCTCGGGAGGCCTCCCATTTCATCTCTAATATGATCGTTCAGG
CCAAGCTCACTTCTCGCGGCGGCTATGAAATGAAGCCGAGTAAAGAACATGCTGGTGCTACACTAGAAGTTCCTTCTGAGGAGCTTCTGCGCAGATCTAAATGAGGAGAT
GAGTCGATGGATGCTGAATTTCTCTGCAATAGTTGCTTAAATTTCAGCTATTTGCTTCACTAATCAGGATTTTTTTTGATACTTTGAAGAATTTGGAACCCTTTTCTCTT
TCTTTTTGTTTACTCATTGGGAGTCTAAATTTATTTGTGTTTGGTCAAATAAACGAACGTGGTTACTATGTGTCACAGTCATGTTTGTCCATGGCCTATTCACTGCCAAT
AAAAGTGCGATTGTGATACTATGAATCTTTTGTGTCTGAATGCGATTGTGACACTATAGATCTTTTGTGTCGTGGCCATTGGAAGTCCCTATTTTTTACCTTTTTAGCCA
ATTGATGATGGGAGGAAGTTGGAGTCTGAAGTGCCAAATTTTGGCTTATAACAATCTTTTCTTTTTTT
Protein sequenceShow/hide protein sequence
MVRGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREASHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEELLRRSK