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Carg07442 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07442
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionplastid movement impaired 2
Genome locationCarg_Chr01:1838401..1839482
RNA-Seq ExpressionCarg07442
SyntenyCarg07442
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607003.1 hypothetical protein SDJN03_00345, partial [Cucurbita argyrosperma subsp. sororia]1.0e-96100Show/hide
Query:  MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSA
        MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSA
Subjt:  MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSA

Query:  SDRLECLMLSRRSVSDLQSFRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLWKTGGMCSGQARE
        SDRLECLMLSRRSVSDLQSFRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLWKTGGMCSGQARE
Subjt:  SDRLECLMLSRRSVSDLQSFRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLWKTGGMCSGQARE

KAG7036702.1 hypothetical protein SDJN02_00322, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-100100Show/hide
Query:  MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSA
        MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSA
Subjt:  MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSA

Query:  SDRLECLMLSRRSVSDLQSFRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLWKTGGMCSGQAREYFLYLN
        SDRLECLMLSRRSVSDLQSFRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLWKTGGMCSGQAREYFLYLN
Subjt:  SDRLECLMLSRRSVSDLQSFRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLWKTGGMCSGQAREYFLYLN

XP_022948507.1 uncharacterized protein At1g66480-like [Cucurbita moschata]1.0e-96100Show/hide
Query:  MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSA
        MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSA
Subjt:  MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSA

Query:  SDRLECLMLSRRSVSDLQSFRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLWKTGGMCSGQARE
        SDRLECLMLSRRSVSDLQSFRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLWKTGGMCSGQARE
Subjt:  SDRLECLMLSRRSVSDLQSFRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLWKTGGMCSGQARE

XP_022998216.1 uncharacterized protein At1g66480-like [Cucurbita maxima]1.0e-9397.79Show/hide
Query:  MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSA
        MGNAMG GSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSI QLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSA
Subjt:  MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSA

Query:  SDRLECLMLSRRSVSDLQSFRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLWKTGGMCSGQARE
        SDRLECLMLSRRS+SDLQSFRLDPDGMSTA RPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLWKTGGMCSGQARE
Subjt:  SDRLECLMLSRRSVSDLQSFRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLWKTGGMCSGQARE

XP_023524596.1 uncharacterized protein At1g66480-like [Cucurbita pepo subsp. pepo]6.8e-9397.24Show/hide
Query:  MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSA
        MGNAMG GSRRSKRTAKVMKINGETFKIRTPTTA QVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSA
Subjt:  MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSA

Query:  SDRLECLMLSRRSVSDLQSFRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLWKTGGMCSGQARE
        SDRLECLMLSRRS+SDLQSFRLDPDGMSTA RPTGPVQIKLRVPREEFERLMKESKSKVEA ERIVDLWKTGGMCSGQARE
Subjt:  SDRLECLMLSRRSVSDLQSFRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLWKTGGMCSGQARE

TrEMBL top hitse value%identityAlignment
A0A0A0L7W0 Uncharacterized protein2.8e-5259.9Show/hide
Query:  MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCS-S
        MGNA+G GSRR KRT KVMKINGET KI  PTTA++VT+H+P+HLLY+S+S+   GLRAKPLDPH  L+PKTLYFLL LP LP  H  L R  SDL + S
Subjt:  MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCS-S

Query:  ASDRLECLMLSRRSVSDLQSFRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVD-----------------LWKTGGMCSGQA
        ASDRLECL+LSRRS+SDLQ+ R DP   ST      PVQ+K ++PR EFERLMKE K+KVE  +RIVD                  WK GG  SG+A
Subjt:  ASDRLECLMLSRRSVSDLQSFRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVD-----------------LWKTGGMCSGQA

A0A1S3C4W5 uncharacterized protein At1g664806.3e-4465.1Show/hide
Query:  MKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSVSDLQ
        MKINGETFKI  PTTA++VT+H+PNHLLY+S+S+ Q GLRAKPLDPH QL+PKTLYFLL LP L G  R L R  SDL  SASDRLECL+LSRRSVSDLQ
Subjt:  MKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSVSDLQ

Query:  SFRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVD
        + R DP            VQ+K ++PR EFERLMKE K+ VE  ++IVD
Subjt:  SFRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVD

A0A5A7V2M4 Putative Encodes a protein whose expression is responsive to nematode infection1.3e-4465.77Show/hide
Query:  MKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSVSDLQ
        MKINGETFKI  PTTA++VT+H+PNHLLY+S+S+ Q GLRAKPLDPH QL+PKTLYFLL LP L G  R L R  SDL  SASDRLECL+LSRRSVSDLQ
Subjt:  MKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSVSDLQ

Query:  SFRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVD
        + R DP   S        VQ+K ++PR EFERLMKE K+ VE  ++IVD
Subjt:  SFRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVD

A0A6J1G9F9 uncharacterized protein At1g66480-like4.9e-97100Show/hide
Query:  MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSA
        MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSA
Subjt:  MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSA

Query:  SDRLECLMLSRRSVSDLQSFRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLWKTGGMCSGQARE
        SDRLECLMLSRRSVSDLQSFRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLWKTGGMCSGQARE
Subjt:  SDRLECLMLSRRSVSDLQSFRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLWKTGGMCSGQARE

A0A6J1K9N3 uncharacterized protein At1g66480-like5.1e-9497.79Show/hide
Query:  MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSA
        MGNAMG GSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSI QLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSA
Subjt:  MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSA

Query:  SDRLECLMLSRRSVSDLQSFRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLWKTGGMCSGQARE
        SDRLECLMLSRRS+SDLQSFRLDPDGMSTA RPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLWKTGGMCSGQARE
Subjt:  SDRLECLMLSRRSVSDLQSFRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLWKTGGMCSGQARE

SwissProt top hitse value%identityAlignment
Q6NLC8 Uncharacterized protein At1g664801.4e-2742.29Show/hide
Query:  MGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLP--------GSHRPLSRVRSDL
        MG      ++ AKVMKI+GETF+I+TP TA +VT  +P ++L DSQ++   G+R+KPL+P+  LKPK  YFL+ LP LP         +  P  RV S +
Subjt:  MGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLP--------GSHRPLSRVRSDL

Query:  CSSASDRLECLMLSRRSVSDLQSFRLD-PDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEA-AERIVDLW
           A +RL+ LMLSRR+VSD+   R D  DG      P G   ++LR+PR +  +LM+E+ +   A AE+I+ ++
Subjt:  CSSASDRLECLMLSRRSVSDLQSFRLD-PDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEA-AERIVDLW

Arabidopsis top hitse value%identityAlignment
AT1G66480.1 plastid movement impaired 29.6e-2942.29Show/hide
Query:  MGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLP--------GSHRPLSRVRSDL
        MG      ++ AKVMKI+GETF+I+TP TA +VT  +P ++L DSQ++   G+R+KPL+P+  LKPK  YFL+ LP LP         +  P  RV S +
Subjt:  MGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLP--------GSHRPLSRVRSDL

Query:  CSSASDRLECLMLSRRSVSDLQSFRLD-PDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEA-AERIVDLW
           A +RL+ LMLSRR+VSD+   R D  DG      P G   ++LR+PR +  +LM+E+ +   A AE+I+ ++
Subjt:  CSSASDRLECLMLSRRSVSDLQSFRLD-PDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEA-AERIVDLW

AT1G71015.1 unknown protein2.9e-2540.48Show/hide
Query:  MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSA
        MGN++G     +K+TA +M INGE+FK++TP  A  V    P H+L +S+++ +LG+RAKPL+PH  L+ K +YF++ LP       P  RVRS +  SA
Subjt:  MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSA

Query:  SDRLECLMLSRRSVSDLQSFRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDL
         +RLE L LSRRS SDL   +   + ++   R      +KL++P+ + E+L KES+S  + + +I  L
Subjt:  SDRLECLMLSRRSVSDLQSFRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDL

AT2G01340.1 Encodes a protein whose expression is responsive to nematode infection.1.9e-2944.38Show/hide
Query:  MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSA
        MGN++GG     K+T KVMKI+GETFK++TP TA +V    P H+L DS+S+   G RAKPL+   +L+ K LYF++     P    P  RVRS +  SA
Subjt:  MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSA

Query:  SDRLECLMLSRRSVSDLQSFRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLW
         +RLE LML+RRS SDL S    P G +T        ++K+R+P+ E E+L+KE  ++ EA ++I  L+
Subjt:  SDRLECLMLSRRSVSDLQSFRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLW

AT5G37840.1 BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1)3.4e-2639.33Show/hide
Query:  MGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHR-PLSRVRS-DLCSSASD
        MG      +   KVMKI+G+ F+++TP TA   T  +P  +L DS+++ +LG+RAKPL+P+  LKP   YFL+ LPP+   ++ P  RV S ++   A +
Subjt:  MGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHR-PLSRVRS-DLCSSASD

Query:  RLECLMLSRRSVSDLQSFRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLW--KTGGMCSGQ
        RLE LMLSRR+VSD+ + R D  G        G  +++LR+PR +  +LM+ES    E A +I+  +   +GG+  G+
Subjt:  RLECLMLSRRSVSDLQSFRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLW--KTGGMCSGQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAATGCAATGGGAGGAGGATCAAGAAGAAGCAAGAGAACAGCAAAGGTGATGAAAATCAACGGCGAAACCTTCAAGATAAGAACACCAACCACAGCCTTCCAAGT
CACCACCCACCATCCAAATCACCTCCTCTATGACTCCCAATCCATCACCCAACTCGGCCTCCGAGCCAAACCTCTGGACCCTCACCACCAGCTCAAACCTAAGACCCTCT
ACTTCCTCCTCCACCTGCCCCCTCTCCCCGGTAGCCATCGCCCGTTGTCTCGTGTGCGCTCCGACCTTTGCTCGTCAGCCTCCGACCGCCTCGAGTGTCTTATGCTCTCT
CGTCGATCAGTCTCCGACCTCCAATCCTTTCGGTTGGATCCCGATGGGATGTCGACTGCCTGTCGCCCTACTGGACCCGTGCAAATCAAGCTTCGAGTGCCGAGGGAAGA
ATTTGAGAGGCTGATGAAGGAAAGTAAGAGCAAGGTAGAGGCAGCGGAGAGGATTGTCGATTTGTGGAAAACAGGCGGCATGTGTAGTGGTCAAGCGCGTGAGTACTTTT
TATATCTTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAATGCAATGGGAGGAGGATCAAGAAGAAGCAAGAGAACAGCAAAGGTGATGAAAATCAACGGCGAAACCTTCAAGATAAGAACACCAACCACAGCCTTCCAAGT
CACCACCCACCATCCAAATCACCTCCTCTATGACTCCCAATCCATCACCCAACTCGGCCTCCGAGCCAAACCTCTGGACCCTCACCACCAGCTCAAACCTAAGACCCTCT
ACTTCCTCCTCCACCTGCCCCCTCTCCCCGGTAGCCATCGCCCGTTGTCTCGTGTGCGCTCCGACCTTTGCTCGTCAGCCTCCGACCGCCTCGAGTGTCTTATGCTCTCT
CGTCGATCAGTCTCCGACCTCCAATCCTTTCGGTTGGATCCCGATGGGATGTCGACTGCCTGTCGCCCTACTGGACCCGTGCAAATCAAGCTTCGAGTGCCGAGGGAAGA
ATTTGAGAGGCTGATGAAGGAAAGTAAGAGCAAGGTAGAGGCAGCGGAGAGGATTGTCGATTTGTGGAAAACAGGCGGCATGTGTAGTGGTCAAGCGCGTGAGTACTTTT
TATATCTTAATTAA
Protein sequenceShow/hide protein sequence
MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLS
RRSVSDLQSFRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLWKTGGMCSGQAREYFLYLN