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Carg07471 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07471
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr01:1996394..1997461
RNA-Seq ExpressionCarg07471
SyntenyCarg07471
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607033.1 hypothetical protein SDJN03_00375, partial [Cucurbita argyrosperma subsp. sororia]5.9e-3985.86Show/hide
Query:  KPTNIRATFSPPVAQSSSFPHRSLGFLQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKASSHS
        KPTN RATFSPPVAQSSSFPHRSLGFLQ    + C+   GYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNK S  S
Subjt:  KPTNIRATFSPPVAQSSSFPHRSLGFLQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKASSHS

KAG7036731.1 hypothetical protein SDJN02_00351, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-80100Show/hide
Query:  MYSPTTVSPAKKDHAFIIFDKKTKRQKTPLNDVVSTGRRPFTLAVYRKPTNIRATFSPPVAQSSSFPHRSLGFLQQNTFFSCEETRGYASISDLKDPVVC
        MYSPTTVSPAKKDHAFIIFDKKTKRQKTPLNDVVSTGRRPFTLAVYRKPTNIRATFSPPVAQSSSFPHRSLGFLQQNTFFSCEETRGYASISDLKDPVVC
Subjt:  MYSPTTVSPAKKDHAFIIFDKKTKRQKTPLNDVVSTGRRPFTLAVYRKPTNIRATFSPPVAQSSSFPHRSLGFLQQNTFFSCEETRGYASISDLKDPVVC

Query:  PKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKASSHSPDST
        PKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKASSHSPDST
Subjt:  PKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKASSHSPDST

XP_022948961.1 uncharacterized protein LOC111452452 [Cucurbita moschata]1.2e-3195.83Show/hide
Query:  QQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKASSHS
        QQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNK S  S
Subjt:  QQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKASSHS

XP_022997677.1 uncharacterized protein LOC111492569 [Cucurbita maxima]1.0e-3093.06Show/hide
Query:  QQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKASSHS
        QQNTF+SCEETRGYASISDLK+PVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNK S  S
Subjt:  QQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKASSHS

XP_023524595.1 uncharacterized protein LOC111788490 [Cucurbita pepo subsp. pepo]1.0e-3094.44Show/hide
Query:  QQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKASSHS
        QQNTFFSCEET GYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNK S  S
Subjt:  QQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKASSHS

TrEMBL top hitse value%identityAlignment
A0A0A0L9U7 Uncharacterized protein3.9e-2884.93Show/hide
Query:  LQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKASSHS
        +QQNTF SCEETRG+ASISDLKDPVVCPKPRRLAILANNHIK PL+WHQ E CDSKAGADLLDIIL K S  S
Subjt:  LQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKASSHS

A0A1S3CF27 uncharacterized protein LOC1035001583.9e-2884.93Show/hide
Query:  LQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKASSHS
        +QQNTF SCEETRG+ASISDLKDPVVCPKPRRLAILANNHIK PL+WHQ E CDSKAGADLLDIIL K S  S
Subjt:  LQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKASSHS

A0A5A7V5L2 Uncharacterized protein2.3e-2870.21Show/hide
Query:  RATFSPPVAQSSSFPHRSLGFLQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKASSHS
        R++   PV++ + F       +QQNTF SCEETRG+ASISDLKDPVVCPKPRRLAILANNHIK PL+WHQ E CDSKAGADLLDIIL K S  S
Subjt:  RATFSPPVAQSSSFPHRSLGFLQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKASSHS

A0A6J1GAN1 uncharacterized protein LOC1114524525.8e-3295.83Show/hide
Query:  QQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKASSHS
        QQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNK S  S
Subjt:  QQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKASSHS

A0A6J1K5S1 uncharacterized protein LOC1114925694.9e-3193.06Show/hide
Query:  QQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKASSHS
        QQNTF+SCEETRGYASISDLK+PVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNK S  S
Subjt:  QQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKASSHS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13390.1 unknown protein5.0e-1247.89Show/hide
Query:  LQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKW---HQAEACDSKAGADLLDIILNK
        +QQN F   EE R  A++SD +D V+CPKPRR+  L N+H    L+W   HQ E C+S +G+++LD IL K
Subjt:  LQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKW---HQAEACDSKAGADLLDIILNK

AT1G13390.2 unknown protein5.0e-1247.89Show/hide
Query:  LQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKW---HQAEACDSKAGADLLDIILNK
        +QQN F   EE R  A++SD +D V+CPKPRR+  L N+H    L+W   HQ E C+S +G+++LD IL K
Subjt:  LQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKW---HQAEACDSKAGADLLDIILNK

AT1G68490.1 unknown protein1.4e-0652Show/hide
Query:  VVCPKPRRLAILANNHIKHPLK------WHQAEACDSKAGADLLDIILNK
        VVCPKPRR+ +  N+H  HP +       HQ E C+SKA  D+LDIIL K
Subjt:  VVCPKPRRLAILANNHIKHPLK------WHQAEACDSKAGADLLDIILNK

AT3G02555.1 unknown protein2.8e-1052.44Show/hide
Query:  LQQNTFFSCEETRGYASI-SDLKDPVVCPKPRRLAILANNHIKHPLKWHQA-----EACDSKAGADLLDIILNK--ASSHSP
        LQQN F S EE+RG+  I S   D VVCPKPRR    ANN I+ P + H +     + CDSKAG DLLDI   K   SS SP
Subjt:  LQQNTFFSCEETRGYASI-SDLKDPVVCPKPRRLAILANNHIKHPLKWHQA-----EACDSKAGADLLDIILNK--ASSHSP

AT5G16110.1 unknown protein2.7e-1356.94Show/hide
Query:  LQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEA----CDSKAGADLLDIILNK
        LQQN F S EE  G+    D KD VVCPKPRR+ +LANN I+ PL+ H ++A    CDSKAGA+LL+II  K
Subjt:  LQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEA----CDSKAGADLLDIILNK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTCTCCAACTACTGTAAGCCCAGCTAAAAAGGACCACGCCTTCATCATTTTCGACAAAAAGACAAAAAGACAAAAAACACCTCTCAACGACGTCGTTTCCACCGG
TCGTCGCCCGTTTACTCTCGCAGTATATAGGAAACCCACTAACATCAGAGCGACTTTCTCCCCTCCGGTGGCTCAAAGCTCCAGCTTTCCTCATCGTTCTTTGGGGTTCC
TTCAGCAGAACACCTTTTTTTCATGTGAAGAGACAAGGGGGTATGCCTCTATCTCTGATCTGAAGGACCCTGTTGTGTGTCCCAAGCCCCGGCGGCTTGCAATTCTTGCT
AACAATCACATTAAACACCCCTTGAAATGGCACCAAGCTGAGGCTTGTGATTCAAAAGCTGGGGCAGACCTTCTAGACATCATTTTAAACAAGGCTAGCTCTCACTCCCC
TGATTCAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATTCTCCAACTACTGTAAGCCCAGCTAAAAAGGACCACGCCTTCATCATTTTCGACAAAAAGACAAAAAGACAAAAAACACCTCTCAACGACGTCGTTTCCACCGG
TCGTCGCCCGTTTACTCTCGCAGTATATAGGAAACCCACTAACATCAGAGCGACTTTCTCCCCTCCGGTGGCTCAAAGCTCCAGCTTTCCTCATCGTTCTTTGGGGTTCC
TTCAGCAGAACACCTTTTTTTCATGTGAAGAGACAAGGGGGTATGCCTCTATCTCTGATCTGAAGGACCCTGTTGTGTGTCCCAAGCCCCGGCGGCTTGCAATTCTTGCT
AACAATCACATTAAACACCCCTTGAAATGGCACCAAGCTGAGGCTTGTGATTCAAAAGCTGGGGCAGACCTTCTAGACATCATTTTAAACAAGGCTAGCTCTCACTCCCC
TGATTCAACTTGA
Protein sequenceShow/hide protein sequence
MYSPTTVSPAKKDHAFIIFDKKTKRQKTPLNDVVSTGRRPFTLAVYRKPTNIRATFSPPVAQSSSFPHRSLGFLQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILA
NNHIKHPLKWHQAEACDSKAGADLLDIILNKASSHSPDST