; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg07472 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07472
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAutophagy-related 2
Genome locationCarg_Chr01:1997482..1997835
RNA-Seq ExpressionCarg07472
SyntenyCarg07472
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607033.1 hypothetical protein SDJN03_00375, partial [Cucurbita argyrosperma subsp. sororia]6.9e-50100Show/hide
Query:  GSEQSSINVASSPPFYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGGCARMTFGLKPAAVRVEGFDCLSRDRQNSR
        GSEQSSINVASSPPFYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGGCARMTFGLKPAAVRVEGFDCLSRDRQNSR
Subjt:  GSEQSSINVASSPPFYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGGCARMTFGLKPAAVRVEGFDCLSRDRQNSR

Query:  IPAVA
        IPAVA
Subjt:  IPAVA

KAG7036732.1 hypothetical protein SDJN02_00352, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-51100Show/hide
Query:  MNGSEQSSINVASSPPFYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGGCARMTFGLKPAAVRVEGFDCLSRDRQN
        MNGSEQSSINVASSPPFYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGGCARMTFGLKPAAVRVEGFDCLSRDRQN
Subjt:  MNGSEQSSINVASSPPFYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGGCARMTFGLKPAAVRVEGFDCLSRDRQN

Query:  SRIPAVA
        SRIPAVA
Subjt:  SRIPAVA

XP_022948961.1 uncharacterized protein LOC111452452 [Cucurbita moschata]8.5e-4898.1Show/hide
Query:  GSEQSSINVASSPPFYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGGCARMTFGLKPAAVRVEGFDCLSRDRQNSR
        GSEQSSINVASSPPFYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGG  ARMTFGLKPAAVRVEGFDCLSRDRQNSR
Subjt:  GSEQSSINVASSPPFYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGGCARMTFGLKPAAVRVEGFDCLSRDRQNSR

Query:  IPAVA
        IPAVA
Subjt:  IPAVA

XP_022997677.1 uncharacterized protein LOC111492569 [Cucurbita maxima]2.0e-4999.05Show/hide
Query:  GSEQSSINVASSPPFYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGGCARMTFGLKPAAVRVEGFDCLSRDRQNSR
        GSEQSSINVASSPPFYCGSPPSRASNPLIQDA+FRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGGCARMTFGLKPAAVRVEGFDCLSRDRQNSR
Subjt:  GSEQSSINVASSPPFYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGGCARMTFGLKPAAVRVEGFDCLSRDRQNSR

Query:  IPAVA
        IPAVA
Subjt:  IPAVA

XP_023524595.1 uncharacterized protein LOC111788490 [Cucurbita pepo subsp. pepo]1.8e-4294.95Show/hide
Query:  GSEQSSINVASSPPFYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSA---GSHKGGGGGCARMTFGLKPAAVRVEGFDCLSRDR
        GSEQSS+NVASSPPFYCGSPPSRASNPLIQDA+FRDEKLSSPMPVLAAAAYSPLSLSSPSSA   GSHKGGGGGCARMTFGLKPAAVRVEGFDCLSRDR
Subjt:  GSEQSSINVASSPPFYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSA---GSHKGGGGGCARMTFGLKPAAVRVEGFDCLSRDR

TrEMBL top hitse value%identityAlignment
A0A0A0L9U7 Uncharacterized protein2.0e-3483.02Show/hide
Query:  GSEQSSINVASSPPFYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGS-HKGGGGGCARMTFGLKPAAVRVEGFDCLSRDRQNS
        GSEQSS +VASSPPF+ GSPPSRASNPLIQDA+F DEKL SPMP L   AYSP  LSSPSSA S HK  GGGCARM FGLKPAAVRVEGFDCLSRDRQNS
Subjt:  GSEQSSINVASSPPFYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGS-HKGGGGGCARMTFGLKPAAVRVEGFDCLSRDRQNS

Query:  RIPAVA
        RIPAVA
Subjt:  RIPAVA

A0A1S3CF27 uncharacterized protein LOC1035001584.4e-3483.02Show/hide
Query:  GSEQSSINVASSPPFYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGS-HKGGGGGCARMTFGLKPAAVRVEGFDCLSRDRQNS
        GSEQSS +VASSPPF+ GSPPSRASNPLIQDA+F DEKL SPMP L   AYSP  LSSPSSA S HK  GGGCARM FGLKPAAVRVEGFDCLSRDRQNS
Subjt:  GSEQSSINVASSPPFYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGS-HKGGGGGCARMTFGLKPAAVRVEGFDCLSRDRQNS

Query:  RIPAVA
        RIPAVA
Subjt:  RIPAVA

A0A5A7V5L2 Uncharacterized protein2.0e-3483.02Show/hide
Query:  GSEQSSINVASSPPFYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGS-HKGGGGGCARMTFGLKPAAVRVEGFDCLSRDRQNS
        GSEQSS +VASSPPF+ GSPPSRASNPLIQDA+F DEKL SPMP L   AYSP  LSSPSSA S HK  GGGCARM FGLKPAAVRVEGFDCLSRDRQNS
Subjt:  GSEQSSINVASSPPFYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGS-HKGGGGGCARMTFGLKPAAVRVEGFDCLSRDRQNS

Query:  RIPAVA
        RIPAVA
Subjt:  RIPAVA

A0A6J1GAN1 uncharacterized protein LOC1114524524.1e-4898.1Show/hide
Query:  GSEQSSINVASSPPFYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGGCARMTFGLKPAAVRVEGFDCLSRDRQNSR
        GSEQSSINVASSPPFYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGG  ARMTFGLKPAAVRVEGFDCLSRDRQNSR
Subjt:  GSEQSSINVASSPPFYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGGCARMTFGLKPAAVRVEGFDCLSRDRQNSR

Query:  IPAVA
        IPAVA
Subjt:  IPAVA

A0A6J1K5S1 uncharacterized protein LOC1114925699.8e-5099.05Show/hide
Query:  GSEQSSINVASSPPFYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGGCARMTFGLKPAAVRVEGFDCLSRDRQNSR
        GSEQSSINVASSPPFYCGSPPSRASNPLIQDA+FRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGGCARMTFGLKPAAVRVEGFDCLSRDRQNSR
Subjt:  GSEQSSINVASSPPFYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGGCARMTFGLKPAAVRVEGFDCLSRDRQNSR

Query:  IPAVA
        IPAVA
Subjt:  IPAVA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13390.1 unknown protein1.8e-0840Show/hide
Query:  GSEQSSINVASSPP-FYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGGCARMTFGLKPAAVRVEGFDCLSRDRQNS
        G EQ       +PP F+ GSPPSR SNPL +D+ FR+E L     ++A+ + S    + P    S + G    A  +FG  P  VRV GFDC   DR++S
Subjt:  GSEQSSINVASSPP-FYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGGCARMTFGLKPAAVRVEGFDCLSRDRQNS

AT1G13390.2 unknown protein1.8e-0840Show/hide
Query:  GSEQSSINVASSPP-FYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGGCARMTFGLKPAAVRVEGFDCLSRDRQNS
        G EQ       +PP F+ GSPPSR SNPL +D+ FR+E L     ++A+ + S    + P    S + G    A  +FG  P  VRV GFDC   DR++S
Subjt:  GSEQSSINVASSPP-FYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGGCARMTFGLKPAAVRVEGFDCLSRDRQNS

AT1G68490.1 unknown protein3.7e-1751.4Show/hide
Query:  GSEQSSINVASSP-PFYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGGC-ARMTFGLKPAAVRVEGFDCLSRDRQN
        G+EQ +  V  SP PF CGSPPSR +NPL QDA+FRDE +S     +++     L L   SS  S  G  GGC  R  FG  P  VRVEGFDCL RD +N
Subjt:  GSEQSSINVASSP-PFYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGGC-ARMTFGLKPAAVRVEGFDCLSRDRQN

Query:  SRIPAVA
          IPA+A
Subjt:  SRIPAVA

AT3G02555.1 unknown protein6.5e-2261.7Show/hide
Query:  SPPFYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGGCARMTFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
        SPPF+ GSPPSRA+NPL QDA+F DEKL++  P L     SPL L S S   S      GC RM FG+KPA VRVEGFDCL+RDR NS IPA+A
Subjt:  SPPFYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGGCARMTFGLKPAAVRVEGFDCLSRDRQNSRIPAVA

AT5G16110.1 unknown protein1.0e-2259.18Show/hide
Query:  VASSPPFYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLA-AAAYSPLSLSSPSSAGSHKGGGGGCARMTFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
        ++SSPP++ GSPPSRA+NPL QDA+FRDEKL+   P       YS     SPSS+ S      GC RM FGL   AVRVEGFDCL+RDRQNS IPA+A
Subjt:  VASSPPFYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLA-AAAYSPLSLSSPSSAGSHKGGGGGCARMTFGLKPAAVRVEGFDCLSRDRQNSRIPAVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGGGTCGGAACAATCTAGCATCAATGTGGCGTCATCACCTCCGTTTTATTGTGGGTCTCCGCCGAGCAGAGCTTCCAATCCATTAATCCAGGATGCGCAGTTTAG
AGATGAGAAACTCAGTAGTCCTATGCCAGTATTGGCTGCAGCAGCATATTCCCCATTGAGTCTCTCGTCGCCATCATCGGCGGGGTCGCACAAAGGGGGAGGAGGAGGGT
GTGCGAGAATGACGTTCGGTCTAAAACCGGCTGCAGTTAGAGTAGAAGGATTTGATTGCCTGAGTAGGGACCGGCAGAATTCAAGGATCCCTGCAGTTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGGGTCGGAACAATCTAGCATCAATGTGGCGTCATCACCTCCGTTTTATTGTGGGTCTCCGCCGAGCAGAGCTTCCAATCCATTAATCCAGGATGCGCAGTTTAG
AGATGAGAAACTCAGTAGTCCTATGCCAGTATTGGCTGCAGCAGCATATTCCCCATTGAGTCTCTCGTCGCCATCATCGGCGGGGTCGCACAAAGGGGGAGGAGGAGGGT
GTGCGAGAATGACGTTCGGTCTAAAACCGGCTGCAGTTAGAGTAGAAGGATTTGATTGCCTGAGTAGGGACCGGCAGAATTCAAGGATCCCTGCAGTTGCTTGA
Protein sequenceShow/hide protein sequence
MNGSEQSSINVASSPPFYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGGCARMTFGLKPAAVRVEGFDCLSRDRQNSRIPAVA