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Carg07536 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07536
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPatatin
Genome locationCarg_Chr13:7695846..7696777
RNA-Seq ExpressionCarg07536
SyntenyCarg07536
Gene Ontology termsGO:0000162 - tryptophan biosynthetic process (biological process)
GO:0006629 - lipid metabolic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056869.1 hypothetical protein E6C27_scaffold96G00380 [Cucumis melo var. makuwa]1.1e-3673.91Show/hide
Query:  MQHNKPSTTFCKSHEKMAATASVAIGTRGTIGSLIKKEIDYFAKIELERCSSRSSQRPQAPDMATSGCSSLPPTFWHSVMSWRRKKKRSRSRFVPKICSS
        MQHNKP+ TF KSH  MAATA VAIGTRGTIGSLIKKEIDYFAKIELE  +S SSQR Q P+MA+SGC S PPTFW S+MSWRRKKK + +RF+ K+CS+
Subjt:  MQHNKPSTTFCKSHEKMAATASVAIGTRGTIGSLIKKEIDYFAKIELERCSSRSSQRPQAPDMATSGCSSLPPTFWHSVMSWRRKKKRSRSRFVPKICSS

Query:  AFDVSESNQMNKISG
         FD S SN+MNKISG
Subjt:  AFDVSESNQMNKISG

KAG6584077.1 hypothetical protein SDJN03_20009, partial [Cucurbita argyrosperma subsp. sororia]1.4e-5599.12Show/hide
Query:  MAATASVAIGTRGTIGSLIKKEIDYFAKIELERCSSRSSQRPQAPDMATSGCSSLPPTFWHSVMSWRRKKKRSRSRFVPKICSSAFDVSESNQMNKISGF
        MAATASVAIGTRGTIGSLIKKEIDYFAKIELERCSSRSSQRPQAPDMATSGCSS PPTFWHSVMSWRRKKKRSRSRFVPKICSSAFDVSESNQMNKISGF
Subjt:  MAATASVAIGTRGTIGSLIKKEIDYFAKIELERCSSRSSQRPQAPDMATSGCSSLPPTFWHSVMSWRRKKKRSRSRFVPKICSSAFDVSESNQMNKISGF

Query:  NYTILQNNFHSLHM
        NYTILQNNFHSLHM
Subjt:  NYTILQNNFHSLHM

KAG7019678.1 hypothetical protein SDJN02_18641, partial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-93100Show/hide
Query:  MQHNKPSTTFCKSHEKMAATASVAIGTRGTIGSLIKKEIDYFAKIELERCSSRSSQRPQAPDMATSGCSSLPPTFWHSVMSWRRKKKRSRSRFVPKICSS
        MQHNKPSTTFCKSHEKMAATASVAIGTRGTIGSLIKKEIDYFAKIELERCSSRSSQRPQAPDMATSGCSSLPPTFWHSVMSWRRKKKRSRSRFVPKICSS
Subjt:  MQHNKPSTTFCKSHEKMAATASVAIGTRGTIGSLIKKEIDYFAKIELERCSSRSSQRPQAPDMATSGCSSLPPTFWHSVMSWRRKKKRSRSRFVPKICSS

Query:  AFDVSESNQMNKISGFNYTILQNNFHSLHMSMREREEKGKKQFLWKILVAVSTSLTCTSLEMHIQNVHKNEQIQL
        AFDVSESNQMNKISGFNYTILQNNFHSLHMSMREREEKGKKQFLWKILVAVSTSLTCTSLEMHIQNVHKNEQIQL
Subjt:  AFDVSESNQMNKISGFNYTILQNNFHSLHMSMREREEKGKKQFLWKILVAVSTSLTCTSLEMHIQNVHKNEQIQL

XP_016898893.1 PREDICTED: uncharacterized protein LOC103485409 [Cucumis melo]4.9e-3774.56Show/hide
Query:  MAATASVAIGTRGTIGSLIKKEIDYFAKIELERCSSRSSQRPQAPDMATSGCSSLPPTFWHSVMSWRRKKKRSRSRFVPKICSSAFDVSESNQMNKISGF
        MAATA VAIGTRGTIGSLIKKEIDYFAKIELE  +S SSQR Q P+MA+SGC S PPTFW S+MSWRRKKK + +RF+ K+CS+ FD S SN+MNKISG 
Subjt:  MAATASVAIGTRGTIGSLIKKEIDYFAKIELERCSSRSSQRPQAPDMATSGCSSLPPTFWHSVMSWRRKKKRSRSRFVPKICSSAFDVSESNQMNKISGF

Query:  NYTILQNNFHSLHM
        +YTILQN+FHSLH+
Subjt:  NYTILQNNFHSLHM

XP_022140128.1 uncharacterized protein LOC111010862 [Momordica charantia]5.1e-4273.28Show/hide
Query:  MQHNKPSTTFCKSHEKMAATASVAIGTRGTIGSLIKKEIDYFAKIELERCSSRSSQRPQAPDMATSG-CSSLPPTFWHSVMSWRRKKKRSRSRFVPKICS
        MQH+KPSTTFCK  E+MAATA VAIGTRGT+GSL+KKEIDYFAKIE ERCS          DMA+S   SS PPTFWH+VMSWRRKKKR  +RF+ KIC 
Subjt:  MQHNKPSTTFCKSHEKMAATASVAIGTRGTIGSLIKKEIDYFAKIELERCSSRSSQRPQAPDMATSG-CSSLPPTFWHSVMSWRRKKKRSRSRFVPKICS

Query:  SAFDVSESNQMNKISGFNYTILQNNFHSLHM
        SAFDVS SN++NKISGFNYTILQN+F+SLHM
Subjt:  SAFDVSESNQMNKISGFNYTILQNNFHSLHM

TrEMBL top hitse value%identityAlignment
A0A0A0LX43 Uncharacterized protein6.5e-4373.08Show/hide
Query:  MQHNKPSTTFCKSHEKMAATASVAIGTRGTIGSLIKKEIDYFAKIELERCSSRSSQRPQAPDMATSGCSSLPPTFWHSVMSWRRKKKRSRSRFVPKICSS
        MQHNKP+ TF KSH  MAA A VAIGTRGTIGSL+KKEIDYFAKIELE  +S SSQR Q P+MA+SGC S PPTFW S+MSWRRK K + +RFV K+CS+
Subjt:  MQHNKPSTTFCKSHEKMAATASVAIGTRGTIGSLIKKEIDYFAKIELERCSSRSSQRPQAPDMATSGCSSLPPTFWHSVMSWRRKKKRSRSRFVPKICSS

Query:  AFDVSESNQMNKISGFNYTILQNNFHSLHM
         FD S SN+MNKISG +YTILQN+FHSLHM
Subjt:  AFDVSESNQMNKISGFNYTILQNNFHSLHM

A0A1S4DSE9 uncharacterized protein LOC1034854092.4e-3774.56Show/hide
Query:  MAATASVAIGTRGTIGSLIKKEIDYFAKIELERCSSRSSQRPQAPDMATSGCSSLPPTFWHSVMSWRRKKKRSRSRFVPKICSSAFDVSESNQMNKISGF
        MAATA VAIGTRGTIGSLIKKEIDYFAKIELE  +S SSQR Q P+MA+SGC S PPTFW S+MSWRRKKK + +RF+ K+CS+ FD S SN+MNKISG 
Subjt:  MAATASVAIGTRGTIGSLIKKEIDYFAKIELERCSSRSSQRPQAPDMATSGCSSLPPTFWHSVMSWRRKKKRSRSRFVPKICSSAFDVSESNQMNKISGF

Query:  NYTILQNNFHSLHM
        +YTILQN+FHSLH+
Subjt:  NYTILQNNFHSLHM

A0A5A7UTL1 Uncharacterized protein5.3e-3773.91Show/hide
Query:  MQHNKPSTTFCKSHEKMAATASVAIGTRGTIGSLIKKEIDYFAKIELERCSSRSSQRPQAPDMATSGCSSLPPTFWHSVMSWRRKKKRSRSRFVPKICSS
        MQHNKP+ TF KSH  MAATA VAIGTRGTIGSLIKKEIDYFAKIELE  +S SSQR Q P+MA+SGC S PPTFW S+MSWRRKKK + +RF+ K+CS+
Subjt:  MQHNKPSTTFCKSHEKMAATASVAIGTRGTIGSLIKKEIDYFAKIELERCSSRSSQRPQAPDMATSGCSSLPPTFWHSVMSWRRKKKRSRSRFVPKICSS

Query:  AFDVSESNQMNKISG
         FD S SN+MNKISG
Subjt:  AFDVSESNQMNKISG

A0A5N6QB68 Uncharacterized protein7.2e-2653.66Show/hide
Query:  KPSTTFCKSHEKMAATASVAIGTRGTIGSLIKKEIDYFAKIELERCSSRSSQRPQAPDMA-TSGCSSLPPTFWHSVMSWRRKKKRSRSRFVPKICSSAFD
        K S T  K  EKM A A VAIGTRGT+GSL++KEI+YF KIE++RC S    + Q  D+A TSG S+  P+FW  +M+W+RKK+RS S  +P IC SA +
Subjt:  KPSTTFCKSHEKMAATASVAIGTRGTIGSLIKKEIDYFAKIELERCSSRSSQRPQAPDMA-TSGCSSLPPTFWHSVMSWRRKKKRSRSRFVPKICSSAFD

Query:  VSESNQMNKISGFNYTILQNNFH
        V++SN++N+I G+NY IL+N+ H
Subjt:  VSESNQMNKISGFNYTILQNNFH

A0A6J1CHB1 uncharacterized protein LOC1110108622.5e-4273.28Show/hide
Query:  MQHNKPSTTFCKSHEKMAATASVAIGTRGTIGSLIKKEIDYFAKIELERCSSRSSQRPQAPDMATSG-CSSLPPTFWHSVMSWRRKKKRSRSRFVPKICS
        MQH+KPSTTFCK  E+MAATA VAIGTRGT+GSL+KKEIDYFAKIE ERCS          DMA+S   SS PPTFWH+VMSWRRKKKR  +RF+ KIC 
Subjt:  MQHNKPSTTFCKSHEKMAATASVAIGTRGTIGSLIKKEIDYFAKIELERCSSRSSQRPQAPDMATSG-CSSLPPTFWHSVMSWRRKKKRSRSRFVPKICS

Query:  SAFDVSESNQMNKISGFNYTILQNNFHSLHM
        SAFDVS SN++NKISGFNYTILQN+F+SLHM
Subjt:  SAFDVSESNQMNKISGFNYTILQNNFHSLHM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21780.1 unknown protein1.4e-1036.52Show/hide
Query:  ASVAIGTRGTIGSLIKKEIDYF-------AKIELERCSSRSSQRP-QAPDMATSGCSSLPPTFWHSVMSWRRKKKRSR---SRFVPKICSSAFDVSESNQ
        A +AIGTRGTIGSL++KEIDYF        + +  R +S  ++   +  D ++S   S     W S   WR+KK+++R    +F P +CS+     E + 
Subjt:  ASVAIGTRGTIGSLIKKEIDYF-------AKIELERCSSRSSQRP-QAPDMATSGCSSLPPTFWHSVMSWRRKKKRSR---SRFVPKICSSAFDVSESNQ

Query:  MNKISGFNYTILQNN
         N++ GFNY IL+++
Subjt:  MNKISGFNYTILQNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCACAATAAACCCAGCACCACATTTTGCAAATCCCATGAAAAAATGGCTGCGACTGCTTCTGTTGCCATTGGAACTCGAGGAACCATTGGTTCACTCATCAAGAA
GGAAATTGATTATTTTGCCAAGATTGAGCTTGAAAGATGCAGCAGCAGGAGCTCACAAAGGCCTCAAGCACCTGACATGGCTACTTCTGGCTGCAGCAGTTTGCCACCCA
CTTTCTGGCACTCTGTAATGTCGTGGCGAAGGAAGAAGAAGCGCAGCAGAAGTCGATTTGTCCCGAAAATATGCTCATCGGCTTTTGATGTTTCTGAAAGCAATCAGATG
AATAAGATTTCCGGGTTCAATTACACGATCCTTCAGAATAATTTCCACAGCTTACACATGTCCATGAGAGAGAGAGAAGAGAAGGGCAAGAAACAGTTCCTCTGGAAAAT
ATTAGTAGCAGTTAGCACCAGCCTCACCTGTACTTCACTTGAAATGCATATTCAAAATGTACACAAGAATGAGCAAATACAATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGCACAATAAACCCAGCACCACATTTTGCAAATCCCATGAAAAAATGGCTGCGACTGCTTCTGTTGCCATTGGAACTCGAGGAACCATTGGTTCACTCATCAAGAA
GGAAATTGATTATTTTGCCAAGATTGAGCTTGAAAGATGCAGCAGCAGGAGCTCACAAAGGCCTCAAGCACCTGACATGGCTACTTCTGGCTGCAGCAGTTTGCCACCCA
CTTTCTGGCACTCTGTAATGTCGTGGCGAAGGAAGAAGAAGCGCAGCAGAAGTCGATTTGTCCCGAAAATATGCTCATCGGCTTTTGATGTTTCTGAAAGCAATCAGATG
AATAAGATTTCCGGGTTCAATTACACGATCCTTCAGAATAATTTCCACAGCTTACACATGTCCATGAGAGAGAGAGAAGAGAAGGGCAAGAAACAGTTCCTCTGGAAAAT
ATTAGTAGCAGTTAGCACCAGCCTCACCTGTACTTCACTTGAAATGCATATTCAAAATGTACACAAGAATGAGCAAATACAATTGTAA
Protein sequenceShow/hide protein sequence
MQHNKPSTTFCKSHEKMAATASVAIGTRGTIGSLIKKEIDYFAKIELERCSSRSSQRPQAPDMATSGCSSLPPTFWHSVMSWRRKKKRSRSRFVPKICSSAFDVSESNQM
NKISGFNYTILQNNFHSLHMSMREREEKGKKQFLWKILVAVSTSLTCTSLEMHIQNVHKNEQIQL