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Carg07543 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07543
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr13:7732156..7732494
RNA-Seq ExpressionCarg07543
SyntenyCarg07543
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584084.1 hypothetical protein SDJN03_20016, partial [Cucurbita argyrosperma subsp. sororia]1.3e-5199.11Show/hide
Query:  MSGLVTRRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGSRRRSSCLRIRIRKFKLRIGRRLKKLKKTMSMGICTARNGICKQFGQLRTCKSLFGRA
        MSGLVTRRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGSRRRSSCLRIRIRKFKLRIGRRLKKLKKTMSMGICTAR GICKQFGQLRTCKSLFGRA
Subjt:  MSGLVTRRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGSRRRSSCLRIRIRKFKLRIGRRLKKLKKTMSMGICTARNGICKQFGQLRTCKSLFGRA

Query:  KEEALAFPSLVS
        KEEALAFPSLVS
Subjt:  KEEALAFPSLVS

KAG7019685.1 hypothetical protein SDJN02_18648, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-52100Show/hide
Query:  MSGLVTRRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGSRRRSSCLRIRIRKFKLRIGRRLKKLKKTMSMGICTARNGICKQFGQLRTCKSLFGRA
        MSGLVTRRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGSRRRSSCLRIRIRKFKLRIGRRLKKLKKTMSMGICTARNGICKQFGQLRTCKSLFGRA
Subjt:  MSGLVTRRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGSRRRSSCLRIRIRKFKLRIGRRLKKLKKTMSMGICTARNGICKQFGQLRTCKSLFGRA

Query:  KEEALAFPSLVS
        KEEALAFPSLVS
Subjt:  KEEALAFPSLVS

KGN64527.1 hypothetical protein Csa_013452 [Cucumis sativus]1.7e-3575.45Show/hide
Query:  MSGLVT-RRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGSRRRSSCLRIRIRKFKLRIGRRLKKLKKTMSMGICTARNGICKQFGQLRTCKSLFGR
        MS L+T RR  GYS+MEKEDP+EKKHRQAQFLIYKIMEQA++GS+RR SCLRIRIRKFKLR+GRR KK+KKTM+M   TAR GIC QFGQLR+CKSLFG+
Subjt:  MSGLVT-RRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGSRRRSSCLRIRIRKFKLRIGRRLKKLKKTMSMGICTARNGICKQFGQLRTCKSLFGR

Query:  AKEEALAFPS
         K E L FP+
Subjt:  AKEEALAFPS

XP_022140046.1 uncharacterized protein LOC111010796 [Momordica charantia]2.3e-4082.3Show/hide
Query:  MSGLVTRRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGSRRRSSCLRIRIRKFKLRIGRRLKKLKKTMSMGICTARNGICKQFGQLRTCKSLFGRA
        MS ++TR+Q+GYSRMEKEDPEEKKHR+AQFLIYKIMEQANSGSRRR +CLRIRIRKFKLRIGRRLKKL+K+MS  + TAR GICKQ GQLRTCKSLFGR 
Subjt:  MSGLVTRRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGSRRRSSCLRIRIRKFKLRIGRRLKKLKKTMSMGICTARNGICKQFGQLRTCKSLFGRA

Query:  -KEEALAFPSLVS
         K E LAFPSLVS
Subjt:  -KEEALAFPSLVS

XP_023001322.1 uncharacterized protein LOC111495486 [Cucurbita maxima]2.9e-5197.32Show/hide
Query:  MSGLVTRRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGSRRRSSCLRIRIRKFKLRIGRRLKKLKKTMSMGICTARNGICKQFGQLRTCKSLFGRA
        MSGLVTRRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSG+RRRSSCLRIRIRKFKLRIGRRLKKLKKTMSMG CTARNGICKQFGQLRTCKSLFGR 
Subjt:  MSGLVTRRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGSRRRSSCLRIRIRKFKLRIGRRLKKLKKTMSMGICTARNGICKQFGQLRTCKSLFGRA

Query:  KEEALAFPSLVS
        KEEALAFPSLVS
Subjt:  KEEALAFPSLVS

TrEMBL top hitse value%identityAlignment
A0A0A0LUT4 Uncharacterized protein8.4e-3675.45Show/hide
Query:  MSGLVT-RRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGSRRRSSCLRIRIRKFKLRIGRRLKKLKKTMSMGICTARNGICKQFGQLRTCKSLFGR
        MS L+T RR  GYS+MEKEDP+EKKHRQAQFLIYKIMEQA++GS+RR SCLRIRIRKFKLR+GRR KK+KKTM+M   TAR GIC QFGQLR+CKSLFG+
Subjt:  MSGLVT-RRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGSRRRSSCLRIRIRKFKLRIGRRLKKLKKTMSMGICTARNGICKQFGQLRTCKSLFGR

Query:  AKEEALAFPS
         K E L FP+
Subjt:  AKEEALAFPS

A0A5N5FGX9 Uncharacterized protein5.5e-1954.37Show/hide
Query:  MSGLVTRRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGSRRRSSCLRIRIRKFKLRIGRRLKKLKKTMSMGICTARNGICKQ-FGQLRTCKSLFGR
        M+ ++ +   GYS+++KEDPE+  HR+AQFLIYK+++QA   +RRR S LRIRIRK K++IGRRLKKL+K+M +GI  AR  + K+ F QL+TC +LFGR
Subjt:  MSGLVTRRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGSRRRSSCLRIRIRKFKLRIGRRLKKLKKTMSMGICTARNGICKQ-FGQLRTCKSLFGR

Query:  AKE
          +
Subjt:  AKE

A0A6J1CEK3 uncharacterized protein LOC1110107961.1e-4082.3Show/hide
Query:  MSGLVTRRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGSRRRSSCLRIRIRKFKLRIGRRLKKLKKTMSMGICTARNGICKQFGQLRTCKSLFGRA
        MS ++TR+Q+GYSRMEKEDPEEKKHR+AQFLIYKIMEQANSGSRRR +CLRIRIRKFKLRIGRRLKKL+K+MS  + TAR GICKQ GQLRTCKSLFGR 
Subjt:  MSGLVTRRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGSRRRSSCLRIRIRKFKLRIGRRLKKLKKTMSMGICTARNGICKQFGQLRTCKSLFGRA

Query:  -KEEALAFPSLVS
         K E LAFPSLVS
Subjt:  -KEEALAFPSLVS

A0A6J1KG77 uncharacterized protein LOC1114954861.4e-5197.32Show/hide
Query:  MSGLVTRRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGSRRRSSCLRIRIRKFKLRIGRRLKKLKKTMSMGICTARNGICKQFGQLRTCKSLFGRA
        MSGLVTRRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSG+RRRSSCLRIRIRKFKLRIGRRLKKLKKTMSMG CTARNGICKQFGQLRTCKSLFGR 
Subjt:  MSGLVTRRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGSRRRSSCLRIRIRKFKLRIGRRLKKLKKTMSMGICTARNGICKQFGQLRTCKSLFGRA

Query:  KEEALAFPSLVS
        KEEALAFPSLVS
Subjt:  KEEALAFPSLVS

W9RFE3 Uncharacterized protein1.7e-2059.38Show/hide
Query:  LVTRRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGSRRRSSCLRIRIRKFKLRIGRRLKKLKKTMSMGICTARNGICKQF-GQLRTCKSLFG
        LV R+ N YS+++KEDPEE+  R+AQFLIYK+MEQA+S SRRR S LRIRIRK K++IG+RL KL+K+M + I  A+  +CKQ   Q +TC+ LFG
Subjt:  LVTRRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGSRRRSSCLRIRIRKFKLRIGRRLKKLKKTMSMGICTARNGICKQF-GQLRTCKSLFG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G11655.1 unknown protein7.3e-0847.62Show/hide
Query:  YSRMEKEDPEEKKHRQAQFLIYKIMEQANSGSRR--RSSCLRIRIRKFKLRIGRRLKKLKKTM
        YS+M+KEDPEE   R+A+FLIYK +++A+  SRR   SS +R+++   K++IG+RL KL++++
Subjt:  YSRMEKEDPEEKKHRQAQFLIYKIMEQANSGSRR--RSSCLRIRIRKFKLRIGRRLKKLKKTM

AT4G04745.1 unknown protein8.6e-0946.15Show/hide
Query:  MSGLVTRRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGS-----RRRSS--CLRIRIRKFKLRIGRRLKKLKKT
        M+ +V      Y++MEKEDP+E  HR+AQFLI K++E+A+S +     RRRSS   + IR+   ++RIG++L+KL+KT
Subjt:  MSGLVTRRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGS-----RRRSS--CLRIRIRKFKLRIGRRLKKLKKT

AT4G21902.1 unknown protein1.7e-0434.67Show/hide
Query:  RRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQAN----SGSRRRSSCLRI---RIRKFKLRIGRRLKKLKKTMSM
        +  N Y+++EKED  E  HR+AQFLI+KI+++A+       ++R++ +++   R+   +++IG++L+KL+K+  M
Subjt:  RRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQAN----SGSRRRSSCLRI---RIRKFKLRIGRRLKKLKKTMSM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGGGTTAGTGACAAGGAGGCAAAATGGGTACTCAAGGATGGAGAAGGAAGACCCAGAAGAGAAAAAGCACAGGCAAGCTCAGTTCTTGATTTACAAGATAATGGA
GCAGGCAAACAGTGGCAGTAGGAGGAGATCTTCGTGTCTCAGAATCAGAATAAGGAAGTTTAAGCTAAGGATTGGGAGGAGGTTGAAGAAGCTGAAGAAGACGATGTCAA
TGGGGATTTGCACTGCAAGAAATGGGATCTGCAAGCAATTTGGACAGCTTAGAACTTGTAAGAGCTTGTTCGGACGAGCTAAGGAGGAAGCTTTGGCCTTTCCTTCTTTG
GTTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGGGTTAGTGACAAGGAGGCAAAATGGGTACTCAAGGATGGAGAAGGAAGACCCAGAAGAGAAAAAGCACAGGCAAGCTCAGTTCTTGATTTACAAGATAATGGA
GCAGGCAAACAGTGGCAGTAGGAGGAGATCTTCGTGTCTCAGAATCAGAATAAGGAAGTTTAAGCTAAGGATTGGGAGGAGGTTGAAGAAGCTGAAGAAGACGATGTCAA
TGGGGATTTGCACTGCAAGAAATGGGATCTGCAAGCAATTTGGACAGCTTAGAACTTGTAAGAGCTTGTTCGGACGAGCTAAGGAGGAAGCTTTGGCCTTTCCTTCTTTG
GTTTCTTGA
Protein sequenceShow/hide protein sequence
MSGLVTRRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGSRRRSSCLRIRIRKFKLRIGRRLKKLKKTMSMGICTARNGICKQFGQLRTCKSLFGRAKEEALAFPSL
VS