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Carg07545 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07545
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDUF4228 domain-containing protein
Genome locationCarg_Chr13:7740403..7740747
RNA-Seq ExpressionCarg07545
SyntenyCarg07545
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584086.1 hypothetical protein SDJN03_20018, partial [Cucurbita argyrosperma subsp. sororia]3.7e-57100Show/hide
Query:  MGNCCRSQSSTMIFAGDDWGSFSSKHGRGRGGNASTSSGDPEKYRLLGEKQTSSCPQPQVKIKMTKRELEDLVKNLEIEGLSLEQVIGRMTNDEDEFQGE
        MGNCCRSQSSTMIFAGDDWGSFSSKHGRGRGGNASTSSGDPEKYRLLGEKQTSSCPQPQVKIKMTKRELEDLVKNLEIEGLSLEQVIGRMTNDEDEFQGE
Subjt:  MGNCCRSQSSTMIFAGDDWGSFSSKHGRGRGGNASTSSGDPEKYRLLGEKQTSSCPQPQVKIKMTKRELEDLVKNLEIEGLSLEQVIGRMTNDEDEFQGE

Query:  HHRSWRPSLQSIPE
        HHRSWRPSLQSIPE
Subjt:  HHRSWRPSLQSIPE

XP_022933211.1 uncharacterized protein LOC111440057 [Cucurbita moschata]1.8e-5699.12Show/hide
Query:  MGNCCRSQSSTMIFAGDDWGSFSSKHGRGRGGNASTSSGDPEKYRLLGEKQTSSCPQPQVKIKMTKRELEDLVKNLEIEGLSLEQVIGRMTNDEDEFQGE
        MGNCCRSQSSTMIFAGDDWGSFSSKHGRGRGGNASTSSGDPEKYRLLGEKQTSSCPQPQVKIKMTKRELEDLVKNLEIEGLSLEQVIGRM NDEDEFQGE
Subjt:  MGNCCRSQSSTMIFAGDDWGSFSSKHGRGRGGNASTSSGDPEKYRLLGEKQTSSCPQPQVKIKMTKRELEDLVKNLEIEGLSLEQVIGRMTNDEDEFQGE

Query:  HHRSWRPSLQSIPE
        HHRSWRPSLQSIPE
Subjt:  HHRSWRPSLQSIPE

XP_023001321.1 uncharacterized protein LOC111495485 [Cucurbita maxima]3.4e-5596.49Show/hide
Query:  MGNCCRSQSSTMIFAGDDWGSFSSKHGRGRGGNASTSSGDPEKYRLLGEKQTSSCPQPQVKIKMTKRELEDLVKNLEIEGLSLEQVIGRMTNDEDEFQGE
        MGNCCRSQSSTM+FAGDDWGSFSSKHGRGRGGNAS S GDPEKYRLLGEKQTSSCPQPQVKIKMTKRELEDLVKNLEIEGLSLEQVIGRM NDEDEFQGE
Subjt:  MGNCCRSQSSTMIFAGDDWGSFSSKHGRGRGGNASTSSGDPEKYRLLGEKQTSSCPQPQVKIKMTKRELEDLVKNLEIEGLSLEQVIGRMTNDEDEFQGE

Query:  HHRSWRPSLQSIPE
        HHRSWRPSLQSIPE
Subjt:  HHRSWRPSLQSIPE

XP_023520212.1 uncharacterized protein LOC111783515 [Cucurbita pepo subsp. pepo]1.5e-5596.49Show/hide
Query:  MGNCCRSQSSTMIFAGDDWGSFSSKHGRGRGGNASTSSGDPEKYRLLGEKQTSSCPQPQVKIKMTKRELEDLVKNLEIEGLSLEQVIGRMTNDEDEFQGE
        MGNCCR+QSS+M+FAGDDWGSFSSKHGRGRGGNASTSSGDPEKYRLLGEKQTSSCPQPQVKIKMTKRELEDLVKNLEIEGLSLEQVIGRM NDEDEFQGE
Subjt:  MGNCCRSQSSTMIFAGDDWGSFSSKHGRGRGGNASTSSGDPEKYRLLGEKQTSSCPQPQVKIKMTKRELEDLVKNLEIEGLSLEQVIGRMTNDEDEFQGE

Query:  HHRSWRPSLQSIPE
        HHRSWRPSLQSIPE
Subjt:  HHRSWRPSLQSIPE

XP_038895954.1 uncharacterized protein LOC120084128 [Benincasa hispida]2.6e-4784.35Show/hide
Query:  MGNCCRSQSSTMIFAGDDWGSFSSKHGRGRGGNASTSSGDPEKYRLLGEKQTSSCPQPQVKIKMTKRELEDLVKNLEIEGLSLEQVIGRMT-NDEDEFQG
        MGNCCRSQSSTM+F GDDWGSFSSKHGRGRGGNA+TS GDPEKYRLLGEK+ +SC QPQVKIKM+KRELEDLVK LE++G+SLEQVIGRM  N EDEF+ 
Subjt:  MGNCCRSQSSTMIFAGDDWGSFSSKHGRGRGGNASTSSGDPEKYRLLGEKQTSSCPQPQVKIKMTKRELEDLVKNLEIEGLSLEQVIGRMT-NDEDEFQG

Query:  EHHRSWRPSLQSIPE
        EHHRSWRPSLQSIPE
Subjt:  EHHRSWRPSLQSIPE

TrEMBL top hitse value%identityAlignment
A0A0A0LRL1 Uncharacterized protein7.2e-4380.17Show/hide
Query:  MGNCCRSQSSTMIFAGDDWGSFSSKHGRGRGGN--ASTSSGDPEKYRLLGEKQTSSCPQPQVKIKMTKRELEDLVKNLEIEGLSLEQVIGRMTNDEDEFQ
        MGNCCRSQSSTM+FAGDDWGSFSSKHGRG G N  A+TS GDPEK+RLLGEK+  SC QP VKIKMTKRELE LVK LE++GLSLEQVIGRM   E+EF+
Subjt:  MGNCCRSQSSTMIFAGDDWGSFSSKHGRGRGGN--ASTSSGDPEKYRLLGEKQTSSCPQPQVKIKMTKRELEDLVKNLEIEGLSLEQVIGRMTNDEDEFQ

Query:  GEHHRSWRPSLQSIPE
         EHHRSWRPSLQSIPE
Subjt:  GEHHRSWRPSLQSIPE

A0A1S3BEX3 uncharacterized protein LOC1034891326.5e-3676.92Show/hide
Query:  MIFAGDDWGSFSSKHGRGRGGNASTSSGDPEKYRLLG-EKQTSSCPQPQVKIKMTKRELEDLVKNLEIEGLSLEQVIGRMTNDEDEFQGEHHRSWRPSLQ
        M+FAGDDWGSFSSKHGRG GGNA+TS GDPEK+RLLG +K+ +SC QP VKIKMTKRELE LVK LE++GL+LEQVIGRM   E+E++ EHHRSWRPSLQ
Subjt:  MIFAGDDWGSFSSKHGRGRGGNASTSSGDPEKYRLLG-EKQTSSCPQPQVKIKMTKRELEDLVKNLEIEGLSLEQVIGRMTNDEDEFQGEHHRSWRPSLQ

Query:  SIPE
        SIPE
Subjt:  SIPE

A0A5A7UTK3 DUF4228 domain-containing protein5.5e-4379.13Show/hide
Query:  MGNCCRSQSSTMIFAGDDWGSFSSKHGRGRGGNASTSSGDPEKYRLLG-EKQTSSCPQPQVKIKMTKRELEDLVKNLEIEGLSLEQVIGRMTNDEDEFQG
        MGNCCRSQSSTM+FAGDDWGSFSSKHGRG GGNA+TS GDPEK+RLLG +K+ +SC QP VKIKMTKRELE LVK LE++GL+LEQVIGRM   E+E++ 
Subjt:  MGNCCRSQSSTMIFAGDDWGSFSSKHGRGRGGNASTSSGDPEKYRLLG-EKQTSSCPQPQVKIKMTKRELEDLVKNLEIEGLSLEQVIGRMTNDEDEFQG

Query:  EHHRSWRPSLQSIPE
        EHHRSWRPSLQSIPE
Subjt:  EHHRSWRPSLQSIPE

A0A6J1EYG4 uncharacterized protein LOC1114400578.8e-5799.12Show/hide
Query:  MGNCCRSQSSTMIFAGDDWGSFSSKHGRGRGGNASTSSGDPEKYRLLGEKQTSSCPQPQVKIKMTKRELEDLVKNLEIEGLSLEQVIGRMTNDEDEFQGE
        MGNCCRSQSSTMIFAGDDWGSFSSKHGRGRGGNASTSSGDPEKYRLLGEKQTSSCPQPQVKIKMTKRELEDLVKNLEIEGLSLEQVIGRM NDEDEFQGE
Subjt:  MGNCCRSQSSTMIFAGDDWGSFSSKHGRGRGGNASTSSGDPEKYRLLGEKQTSSCPQPQVKIKMTKRELEDLVKNLEIEGLSLEQVIGRMTNDEDEFQGE

Query:  HHRSWRPSLQSIPE
        HHRSWRPSLQSIPE
Subjt:  HHRSWRPSLQSIPE

A0A6J1KIA5 uncharacterized protein LOC1114954851.7e-5596.49Show/hide
Query:  MGNCCRSQSSTMIFAGDDWGSFSSKHGRGRGGNASTSSGDPEKYRLLGEKQTSSCPQPQVKIKMTKRELEDLVKNLEIEGLSLEQVIGRMTNDEDEFQGE
        MGNCCRSQSSTM+FAGDDWGSFSSKHGRGRGGNAS S GDPEKYRLLGEKQTSSCPQPQVKIKMTKRELEDLVKNLEIEGLSLEQVIGRM NDEDEFQGE
Subjt:  MGNCCRSQSSTMIFAGDDWGSFSSKHGRGRGGNASTSSGDPEKYRLLGEKQTSSCPQPQVKIKMTKRELEDLVKNLEIEGLSLEQVIGRMTNDEDEFQGE

Query:  HHRSWRPSLQSIPE
        HHRSWRPSLQSIPE
Subjt:  HHRSWRPSLQSIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G20340.1 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.2.0e-0832.48Show/hide
Query:  MGNCCRSQSSTMIFAGDDWGSFSSKHGRGRG-GNASTSSGDPEKYRLLGEKQTSSCPQPQVKIKMTKRELEDLVKNLEIEGLSLEQVIGR--MTNDEDEF
        MGNC R +S  M +AG+DW  F ++        + +T  G P    ++     SS P  ++KI++TK++L DL+  + +  L+ +Q      + N+    
Subjt:  MGNCCRSQSSTMIFAGDDWGSFSSKHGRGRG-GNASTSSGDPEKYRLLGEKQTSSCPQPQVKIKMTKRELEDLVKNLEIEGLSLEQVIGR--MTNDEDEF

Query:  QGEHHRSWRPSLQSIPE
        +    R WRP LQSIPE
Subjt:  QGEHHRSWRPSLQSIPE

AT4G21920.1 unknown protein4.5e-1335.66Show/hide
Query:  MGNC-CRSQSSTMIFAGDDWGSFSSKHGRGRGGNASTSSGDPEKYRLLGE-------KQTSSCPQPQVKIKMTKRELEDLVKNLEIEGLSLEQVIGRMT-
        MGNC C ++ +T  ++GDD GS++ +  R R       + D EK  LLGE         +SS  + ++KI++TK+ELEDL++N+ ++ L+ E+++ ++  
Subjt:  MGNC-CRSQSSTMIFAGDDWGSFSSKHGRGRGGNASTSSGDPEKYRLLGE-------KQTSSCPQPQVKIKMTKRELEDLVKNLEIEGLSLEQVIGRMT-

Query:  --NDEDEFQG----EHHRSWRPSLQSIPE
           D+  F       HH+ W+P LQSIPE
Subjt:  --NDEDEFQG----EHHRSWRPSLQSIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAACTGTTGCAGAAGCCAATCCTCTACAATGATCTTCGCCGGAGACGATTGGGGCTCCTTCAGTTCCAAGCACGGCCGTGGCCGCGGCGGAAACGCCTCAACCTC
CAGCGGCGATCCAGAGAAATATAGACTACTTGGAGAGAAGCAAACATCGTCGTGTCCACAGCCGCAAGTGAAAATCAAGATGACGAAGAGAGAGCTTGAGGATCTGGTGA
AGAATCTGGAGATAGAAGGCTTGAGTCTAGAACAAGTAATTGGGCGGATGACGAACGATGAGGACGAATTTCAAGGTGAGCACCATCGCTCATGGAGACCTTCTCTTCAA
AGCATTCCAGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCAACTGTTGCAGAAGCCAATCCTCTACAATGATCTTCGCCGGAGACGATTGGGGCTCCTTCAGTTCCAAGCACGGCCGTGGCCGCGGCGGAAACGCCTCAACCTC
CAGCGGCGATCCAGAGAAATATAGACTACTTGGAGAGAAGCAAACATCGTCGTGTCCACAGCCGCAAGTGAAAATCAAGATGACGAAGAGAGAGCTTGAGGATCTGGTGA
AGAATCTGGAGATAGAAGGCTTGAGTCTAGAACAAGTAATTGGGCGGATGACGAACGATGAGGACGAATTTCAAGGTGAGCACCATCGCTCATGGAGACCTTCTCTTCAA
AGCATTCCAGAGTGA
Protein sequenceShow/hide protein sequence
MGNCCRSQSSTMIFAGDDWGSFSSKHGRGRGGNASTSSGDPEKYRLLGEKQTSSCPQPQVKIKMTKRELEDLVKNLEIEGLSLEQVIGRMTNDEDEFQGEHHRSWRPSLQ
SIPE