; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg07629 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07629
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionpentatricopeptide repeat-containing protein At3g22470, mitochondrial-like
Genome locationCarg_Chr13:8216261..8217031
RNA-Seq ExpressionCarg07629
SyntenyCarg07629
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584178.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]1.6e-13298.05Show/hide
Query:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFSSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS
        MKT+ QRLL LHRLPLPPQLVHDQIPAIGTPFS SSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS
Subjt:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFSSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS

Query:  HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP
        HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP
Subjt:  HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP

Query:  DYDLRSWVFRCLLREAMIGKATELSETLNSIGDRNTSDHLRRVSELLDRIITNWIE
        DYDLRSWVFRCLLREAMIG+ATELSETLNSIGDRNTSDHLRRVSELLDRIITNWIE
Subjt:  DYDLRSWVFRCLLREAMIGKATELSETLNSIGDRNTSDHLRRVSELLDRIITNWIE

KAG7019769.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]8.9e-136100Show/hide
Query:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFSSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS
        MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFSSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS
Subjt:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFSSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS

Query:  HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP
        HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP
Subjt:  HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP

Query:  DYDLRSWVFRCLLREAMIGKATELSETLNSIGDRNTSDHLRRVSELLDRIITNWIE
        DYDLRSWVFRCLLREAMIGKATELSETLNSIGDRNTSDHLRRVSELLDRIITNWIE
Subjt:  DYDLRSWVFRCLLREAMIGKATELSETLNSIGDRNTSDHLRRVSELLDRIITNWIE

XP_022923926.1 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucurbita moschata]7.0e-13398.05Show/hide
Query:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFSSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS
        MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSF SSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS
Subjt:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFSSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS

Query:  HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP
        HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYS+QRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP
Subjt:  HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP

Query:  DYDLRSWVFRCLLREAMIGKATELSETLNSIGDRNTSDHLRRVSELLDRIITNWIE
        DYDLRSWVFRCLLREAMIG+ATELSETLNSIGDRNTSDHLRRVSELLD II NWIE
Subjt:  DYDLRSWVFRCLLREAMIGKATELSETLNSIGDRNTSDHLRRVSELLDRIITNWIE

XP_023000755.1 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucurbita maxima]8.3e-12693.75Show/hide
Query:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFSSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS
        MKTI QRLLPL RLPLPPQLVHDQIPAIGTPFS SSSSSSVYDSAASKINTTLTQDELTKISLLLPRLC YNHHSTAITLLDTALLTNLSLQSLPLSILS
Subjt:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFSSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS

Query:  HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP
        HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLI SYS+QRK KEALKIFHWMLRPGSPCKPDE VYKTLIAGLCRKGMVLDALKILKNMIDSNLVP
Subjt:  HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP

Query:  DYDLRSWVFRCLLREAMIGKATELSETLNSIGDRNTSDHLRRVSELLDRIITNWIE
        DYDLRSWV  CLLREAMIG+ATELSETLNSI DRN SDHLR+VSELLDR+I NWIE
Subjt:  DYDLRSWVFRCLLREAMIGKATELSETLNSIGDRNTSDHLRRVSELLDRIITNWIE

XP_023520260.1 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucurbita pepo subsp. pepo]2.0e-12493.36Show/hide
Query:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFSSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS
        MKTI QRLLPLHR PLPPQLVHDQIPAIGTPFS SSSSSSVYDSAASKINTTLTQDELTKISLLLPRLC  NHHSTAITLLD ALLTNLSLQSLPLSILS
Subjt:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFSSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS

Query:  HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP
        HSLASQSDFALTMSLLTRL HHRNALLYSSPIITMLI SY +QRK KEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP
Subjt:  HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP

Query:  DYDLRSWVFRCLLREAMIGKATELSETLNSIGDRNTSDHLRRVSELLDRIITNWIE
        DYDLRSWVFRCLLREAMIG+ATELSETLNSIGDRNTS+HL++VSELLD II NWIE
Subjt:  DYDLRSWVFRCLLREAMIGKATELSETLNSIGDRNTSDHLRRVSELLDRIITNWIE

TrEMBL top hitse value%identityAlignment
A0A0A0LRQ9 Uncharacterized protein3.1e-9473.64Show/hide
Query:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFSSS--SSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSI
        MK I Q+LL L RLPL P+L+  QIPAI +PFS SSS  S S   S A+K NTTLT DELT+I+LLLPRLC +NH STAI+LL   LLTN SL SL LS+
Subjt:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFSSS--SSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSI

Query:  LSHSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNL
        LSHSLASQSDFALTMSLLTRLKHH NALLYS+PI+TMLI SY ++RK KEALK+FHWMLRPGSPCKP+ERVYKTLIAGL RKGM  DALK+L+NMIDSNL
Subjt:  LSHSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNL

Query:  VPDYDLRSWVFRCLLREAMIGKATELSETLNSIGDRNTSDHLRRVSELLDRIITNWIE
        VPD DLR+WVFR LL+EAMI +A E ++ LN +GD+NT DHLRRVSELL+RIITNWI+
Subjt:  VPDYDLRSWVFRCLLREAMIGKATELSETLNSIGDRNTSDHLRRVSELLDRIITNWIE

A0A5A7UP05 Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X21.4e-8974.69Show/hide
Query:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFSSS--SSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSI
        MK I Q+LL L RLPL P+L+  QIP I +PFS SSS  S S   S A++ NTTLT DELT+I+LLLPRLC YNH STAITLL   LLTN SLQSL LS+
Subjt:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFSSS--SSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSI

Query:  LSHSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNL
        LSHSLASQSDFALTMSLLTRLKHH NALLYS+PI+TMLI SY ++RK KEALKIFHWMLRPGSPCKP+ERVYKTLIAGL RKGM  DALK+L+NMIDSNL
Subjt:  LSHSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNL

Query:  VPDYDLRSWVFRCLLREAMIGKATELSETLNSIGDRNTSDHLRRV
        VPD DLR+WVFRCLLREAMI +A E +ET N +GD++T DHLRRV
Subjt:  VPDYDLRSWVFRCLLREAMIGKATELSETLNSIGDRNTSDHLRRV

A0A5D3BHR6 Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X11.4e-8974.69Show/hide
Query:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFSSS--SSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSI
        MK I Q+LL L RLPL P+L+  QIP I +PFS SSS  S S   S A++ NTTLT DELT+I+LLLPRLC YNH STAITLL   LLTN SLQSL LS+
Subjt:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFSSS--SSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSI

Query:  LSHSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNL
        LSHSLASQSDFALTMSLLTRLKHH NALLYS+PI+TMLI SY ++RK KEALKIFHWMLRPGSPCKP+ERVYKTLIAGL RKGM  DALK+L+NMIDSNL
Subjt:  LSHSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNL

Query:  VPDYDLRSWVFRCLLREAMIGKATELSETLNSIGDRNTSDHLRRV
        VPD DLR+WVFRCLLREAMI +A E +ET N +GD++T DHLRRV
Subjt:  VPDYDLRSWVFRCLLREAMIGKATELSETLNSIGDRNTSDHLRRV

A0A6J1E820 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like3.4e-13398.05Show/hide
Query:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFSSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS
        MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSF SSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS
Subjt:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFSSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS

Query:  HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP
        HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYS+QRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP
Subjt:  HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP

Query:  DYDLRSWVFRCLLREAMIGKATELSETLNSIGDRNTSDHLRRVSELLDRIITNWIE
        DYDLRSWVFRCLLREAMIG+ATELSETLNSIGDRNTSDHLRRVSELLD II NWIE
Subjt:  DYDLRSWVFRCLLREAMIGKATELSETLNSIGDRNTSDHLRRVSELLDRIITNWIE

A0A6J1KEJ7 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like4.0e-12693.75Show/hide
Query:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFSSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS
        MKTI QRLLPL RLPLPPQLVHDQIPAIGTPFS SSSSSSVYDSAASKINTTLTQDELTKISLLLPRLC YNHHSTAITLLDTALLTNLSLQSLPLSILS
Subjt:  MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFSSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILS

Query:  HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP
        HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLI SYS+QRK KEALKIFHWMLRPGSPCKPDE VYKTLIAGLCRKGMVLDALKILKNMIDSNLVP
Subjt:  HSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP

Query:  DYDLRSWVFRCLLREAMIGKATELSETLNSIGDRNTSDHLRRVSELLDRIITNWIE
        DYDLRSWV  CLLREAMIG+ATELSETLNSI DRN SDHLR+VSELLDR+I NWIE
Subjt:  DYDLRSWVFRCLLREAMIGKATELSETLNSIGDRNTSDHLRRVSELLDRIITNWIE

SwissProt top hitse value%identityAlignment
O49436 Pentatricopeptide repeat-containing protein At4g200901.5e-0525Show/hide
Query:  LLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILSHSLASQ---SDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKEALKIFHWMLRPG
        L+  LC       A++LL+  + +      +    L + L  Q   +D    +S +    +H N  +YS     +LI    ++ K +EA+ ++  M   G
Subjt:  LLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILSHSLASQ---SDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKEALKIFHWMLRPG

Query:  SPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGKATELSETLNSIG
          CKP+  VY  L+ GLCR+G   +A +IL  MI S  +P+    S + +   +  +  +A ++ + ++  G
Subjt:  SPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGKATELSETLNSIG

P0C8Q3 Pentatricopeptide repeat-containing protein At4g198909.9e-0527.38Show/hide
Query:  LCFYNHHSTAITLLDTALLTNLSLQSLPLSILSHSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKE-------------------
        LC  +    A  LL+ A    L    +  +IL      Q+D    ++   R+  ++        +  +LI ++ RQ+K+KE                   
Subjt:  LCFYNHHSTAITLLDTALLTNLSLQSLPLSILSHSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKE-------------------

Query:  ----------------ALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP
                        ALK FH M R G  C PD   Y +LI+GLC+K MV +A K+ + MID  L P
Subjt:  ----------------ALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP

Q6NQ83 Pentatricopeptide repeat-containing protein At3g22470, mitochondrial1.2e-0526.04Show/hide
Query:  ELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILSHSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKEALKIFHWM
        +L  +S L+  LC     S A+ L+D  +        +    + + L    + AL + L  +++  RN +  S    +++I S  +     +AL +F+ M
Subjt:  ELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILSHSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKEALKIFHWM

Query:  LRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGKATELSETLNSIGDRNTSDHLRRVSELLD
           G   K D   Y +LI GLC  G   D  K+L+ MI  N++PD    S +    ++E   GK  E  E  N +  R  +      + L+D
Subjt:  LRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGKATELSETLNSIGDRNTSDHLRRVSELLD

Q9FMF6 Pentatricopeptide repeat-containing protein At5g64320, mitochondrial8.9e-0632.58Show/hide
Query:  LILSYSRQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGKATEL
        LI ++ ++ ++ EA++IF  M R G  CKPD   + +LI+GLC    +  AL +L++MI   +V +    + +    LR   I +A +L
Subjt:  LILSYSRQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGKATEL

Q9SAB4 Pentatricopeptide repeat-containing protein At1g11630, mitochondrial2.6e-0528.97Show/hide
Query:  SSPIITMLILSYSRQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGKATELSETL
        +S   ++LI  +  +  L EA+ +F  M+  G   KPD   Y TLI  LC+ G    AL + +  ++ N VP + +  W+   L   + + +A EL   +
Subjt:  SSPIITMLILSYSRQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGKATELSETL

Query:  NSIGDRN
             RN
Subjt:  NSIGDRN

Arabidopsis top hitse value%identityAlignment
AT1G11630.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.8e-0628.97Show/hide
Query:  SSPIITMLILSYSRQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGKATELSETL
        +S   ++LI  +  +  L EA+ +F  M+  G   KPD   Y TLI  LC+ G    AL + +  ++ N VP + +  W+   L   + + +A EL   +
Subjt:  SSPIITMLILSYSRQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGKATELSETL

Query:  NSIGDRN
             RN
Subjt:  NSIGDRN

AT3G22470.1 Pentatricopeptide repeat (PPR) superfamily protein8.3e-0726.04Show/hide
Query:  ELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILSHSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKEALKIFHWM
        +L  +S L+  LC     S A+ L+D  +        +    + + L    + AL + L  +++  RN +  S    +++I S  +     +AL +F+ M
Subjt:  ELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILSHSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKEALKIFHWM

Query:  LRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGKATELSETLNSIGDRNTSDHLRRVSELLD
           G   K D   Y +LI GLC  G   D  K+L+ MI  N++PD    S +    ++E   GK  E  E  N +  R  +      + L+D
Subjt:  LRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGKATELSETLNSIGDRNTSDHLRRVSELLD

AT4G19890.1 Pentatricopeptide repeat (PPR-like) superfamily protein7.0e-0627.38Show/hide
Query:  LCFYNHHSTAITLLDTALLTNLSLQSLPLSILSHSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKE-------------------
        LC  +    A  LL+ A    L    +  +IL      Q+D    ++   R+  ++        +  +LI ++ RQ+K+KE                   
Subjt:  LCFYNHHSTAITLLDTALLTNLSLQSLPLSILSHSLASQSDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKE-------------------

Query:  ----------------ALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP
                        ALK FH M R G  C PD   Y +LI+GLC+K MV +A K+ + MID  L P
Subjt:  ----------------ALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVP

AT4G20090.1 Pentatricopeptide repeat (PPR) superfamily protein1.1e-0625Show/hide
Query:  LLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILSHSLASQ---SDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKEALKIFHWMLRPG
        L+  LC       A++LL+  + +      +    L + L  Q   +D    +S +    +H N  +YS     +LI    ++ K +EA+ ++  M   G
Subjt:  LLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILSHSLASQ---SDFALTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKEALKIFHWMLRPG

Query:  SPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGKATELSETLNSIG
          CKP+  VY  L+ GLCR+G   +A +IL  MI S  +P+    S + +   +  +  +A ++ + ++  G
Subjt:  SPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGKATELSETLNSIG

AT5G64320.1 Pentatricopeptide repeat (PPR) superfamily protein6.4e-0732.58Show/hide
Query:  LILSYSRQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGKATEL
        LI ++ ++ ++ EA++IF  M R G  CKPD   + +LI+GLC    +  AL +L++MI   +V +    + +    LR   I +A +L
Subjt:  LILSYSRQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGKATEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGACAATAACGCAACGGCTTCTTCCCCTCCACCGTCTTCCACTTCCACCGCAGCTCGTTCACGATCAAATTCCGGCCATTGGTACTCCATTTTCGTTTTCCTCCTC
CTCCTCCTCCGTTTATGATTCCGCAGCCAGTAAAATCAATACGACTCTTACCCAAGACGAGCTTACAAAGATCAGCCTCCTTCTTCCTCGTCTCTGTTTCTACAACCACC
ACTCCACTGCAATAACACTTCTGGACACGGCGCTCCTCACGAATCTTTCACTTCAATCGCTTCCTCTCTCGATTCTTTCCCATTCCCTTGCTTCCCAATCCGATTTCGCC
CTCACGATGTCCCTCCTCACCCGTCTCAAGCACCACCGGAATGCGCTGCTCTATTCAAGCCCTATTATCACCATGCTTATTTTATCTTATTCTAGGCAGCGGAAATTGAA
GGAGGCCTTGAAGATTTTCCATTGGATGCTAAGACCAGGGTCGCCATGTAAGCCGGATGAGAGGGTTTATAAAACCCTAATCGCGGGACTGTGTAGGAAGGGTATGGTAC
TTGATGCTTTGAAGATTCTGAAGAACATGATTGACTCGAATTTGGTTCCGGATTACGATCTGAGGAGTTGGGTTTTTAGGTGTTTGCTGAGAGAAGCGATGATCGGCAAA
GCAACAGAGTTGAGTGAGACTTTGAATTCCATTGGCGATCGGAATACCAGTGACCATCTGAGAAGGGTGTCGGAATTGTTGGACCGTATCATCACCAATTGGATTGAATA
G
mRNA sequenceShow/hide mRNA sequence
ATGAAGACAATAACGCAACGGCTTCTTCCCCTCCACCGTCTTCCACTTCCACCGCAGCTCGTTCACGATCAAATTCCGGCCATTGGTACTCCATTTTCGTTTTCCTCCTC
CTCCTCCTCCGTTTATGATTCCGCAGCCAGTAAAATCAATACGACTCTTACCCAAGACGAGCTTACAAAGATCAGCCTCCTTCTTCCTCGTCTCTGTTTCTACAACCACC
ACTCCACTGCAATAACACTTCTGGACACGGCGCTCCTCACGAATCTTTCACTTCAATCGCTTCCTCTCTCGATTCTTTCCCATTCCCTTGCTTCCCAATCCGATTTCGCC
CTCACGATGTCCCTCCTCACCCGTCTCAAGCACCACCGGAATGCGCTGCTCTATTCAAGCCCTATTATCACCATGCTTATTTTATCTTATTCTAGGCAGCGGAAATTGAA
GGAGGCCTTGAAGATTTTCCATTGGATGCTAAGACCAGGGTCGCCATGTAAGCCGGATGAGAGGGTTTATAAAACCCTAATCGCGGGACTGTGTAGGAAGGGTATGGTAC
TTGATGCTTTGAAGATTCTGAAGAACATGATTGACTCGAATTTGGTTCCGGATTACGATCTGAGGAGTTGGGTTTTTAGGTGTTTGCTGAGAGAAGCGATGATCGGCAAA
GCAACAGAGTTGAGTGAGACTTTGAATTCCATTGGCGATCGGAATACCAGTGACCATCTGAGAAGGGTGTCGGAATTGTTGGACCGTATCATCACCAATTGGATTGAATA
G
Protein sequenceShow/hide protein sequence
MKTITQRLLPLHRLPLPPQLVHDQIPAIGTPFSFSSSSSSVYDSAASKINTTLTQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILSHSLASQSDFA
LTMSLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGK
ATELSETLNSIGDRNTSDHLRRVSELLDRIITNWIE