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Carg07690 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07690
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNHL domain-containing protein
Genome locationCarg_Chr13:8468553..8469047
RNA-Seq ExpressionCarg07690
SyntenyCarg07690
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584232.1 hypothetical protein SDJN03_20164, partial [Cucurbita argyrosperma subsp. sororia]1.2e-90100Show/hide
Query:  MGDRDGGFKEIESIGEIDGADALLASRRYGCFCFPCFGQSRSASDELSWWERAKAKAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNR
        MGDRDGGFKEIESIGEIDGADALLASRRYGCFCFPCFGQSRSASDELSWWERAKAKAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNR
Subjt:  MGDRDGGFKEIESIGEIDGADALLASRRYGCFCFPCFGQSRSASDELSWWERAKAKAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNR

Query:  NRPAAVKPGKFQYDPISYALNFDEGHNGDVDFEGDEYSGGFQHFSDRFSAVPASGKSSGAAVAS
        NRPAAVKPGKFQYDPISYALNFDEGHNGDVDFEGDEYSGGFQHFSDRFSAVPASGKSSGAAVAS
Subjt:  NRPAAVKPGKFQYDPISYALNFDEGHNGDVDFEGDEYSGGFQHFSDRFSAVPASGKSSGAAVAS

XP_022923865.1 uncharacterized protein LOC111431456 [Cucurbita moschata]1.2e-8898.78Show/hide
Query:  MGDRDGGFKEIESIGEIDGADALLASRRYGCFCFPCFGQSRSASDELSWWERAKAKAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNR
        MGDRDGGFKEIESIGEIDGADALLASRRYGCFCFPCFGQSRSASDELSWWERAKAKAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNR
Subjt:  MGDRDGGFKEIESIGEIDGADALLASRRYGCFCFPCFGQSRSASDELSWWERAKAKAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNR

Query:  NRPAAVKPGKFQYDPISYALNFDEGHNGDVDFEGDEYSGGFQHFSDRFSAVPASGKSSGAAVAS
        NRPAAVK GKFQYDPISYALNFDEGHNGDVDFEGDEYSGGFQ+FSDRFSAVPASGKSSGAAVAS
Subjt:  NRPAAVKPGKFQYDPISYALNFDEGHNGDVDFEGDEYSGGFQHFSDRFSAVPASGKSSGAAVAS

XP_023000665.1 uncharacterized protein LOC111495035 [Cucurbita maxima]1.1e-8696.95Show/hide
Query:  MGDRDGGFKEIESIGEIDGADALLASRRYGCFCFPCFGQSRSASDELSWWERAKAKAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNR
        MGDRDGGFKEIESIGEIDGADALLASRRY CFCFPCFGQSRSASDELSWWERAKAKAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNR
Subjt:  MGDRDGGFKEIESIGEIDGADALLASRRYGCFCFPCFGQSRSASDELSWWERAKAKAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNR

Query:  NRPAAVKPGKFQYDPISYALNFDEGHNGDVDFEGDEYSGGFQHFSDRFSAVPASGKSSGAAVAS
        NRPAAVK GKFQYDPISYALNFDEGHNGDV+FEGDEYSGGFQ+FSDRFSAVPAS KSSGAAVAS
Subjt:  NRPAAVKPGKFQYDPISYALNFDEGHNGDVDFEGDEYSGGFQHFSDRFSAVPASGKSSGAAVAS

XP_023519821.1 uncharacterized protein LOC111783153 [Cucurbita pepo subsp. pepo]5.8e-8898.17Show/hide
Query:  MGDRDGGFKEIESIGEIDGADALLASRRYGCFCFPCFGQSRSASDELSWWERAKAKAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNR
        MGDRDGGFKEIESIGEIDGADALLASRRY CFCFPCFGQSRSASDELSWWERAKAKAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNR
Subjt:  MGDRDGGFKEIESIGEIDGADALLASRRYGCFCFPCFGQSRSASDELSWWERAKAKAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNR

Query:  NRPAAVKPGKFQYDPISYALNFDEGHNGDVDFEGDEYSGGFQHFSDRFSAVPASGKSSGAAVAS
        NRPAAVK GKFQYDPISYALNFDEGHNGDVDFEGDEYSGGFQ+FSDRFSAVPASGKSSGAAVAS
Subjt:  NRPAAVKPGKFQYDPISYALNFDEGHNGDVDFEGDEYSGGFQHFSDRFSAVPASGKSSGAAVAS

XP_038894780.1 uncharacterized protein LOC120083201 [Benincasa hispida]3.5e-7787.58Show/hide
Query:  MGDRDGGFKEIESIGEIDGADALLASRRYGCFCFPCFGQSRSASDELSWWERAKAKAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNR
        MGDRDG FKE+ESIGEIDGADALLAS+RY CFCFPCFG  RSASDE+SWWER K KAKSTKFDGEDHWW+GGIRSLKKLREWSEIVAGPRWKTFIRRFNR
Subjt:  MGDRDGGFKEIESIGEIDGADALLASRRYGCFCFPCFGQSRSASDELSWWERAKAKAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNR

Query:  NRPAAVKPGKFQYDPISYALNFDEGHNGDVDFEGDEYS-GGFQHFSDRFSAVPASGKSSGA
        NRPA VK GKFQYDPISYALNFD+GHNGDVDF+GDEYS GGFQ+FSDRF+AVP   KSSGA
Subjt:  NRPAAVKPGKFQYDPISYALNFDEGHNGDVDFEGDEYS-GGFQHFSDRFSAVPASGKSSGA

TrEMBL top hitse value%identityAlignment
A0A0A0LU30 Uncharacterized protein3.4e-7080.95Show/hide
Query:  MGDRDGGFKEIESIGEIDGADALLASRRYGCFCFPCFGQSRSASDELSWWERAKAKAKSTKFDGED-HWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFN
        MGDRDG FKE+ES   IDGADALL S+RY CFCFPCFG SRS SDELSWWER K KAKSTKFD ED HWW+GGIRSLKKLREWSEIVAGPRWKTFIRRFN
Subjt:  MGDRDGGFKEIESIGEIDGADALLASRRYGCFCFPCFGQSRSASDELSWWERAKAKAKSTKFDGED-HWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFN

Query:  RNRPAAVKPGKFQYDPISYALNFDEGHNGDVDFEGDEYS--GGFQHFSDRFSAV-PASGKSSGAAVAS
        RNRPA VK GKFQYDPISYALNFDEGHNGDVDF+GDEY+  GGFQ+FSDRF+A+ PA  KSS +A  +
Subjt:  RNRPAAVKPGKFQYDPISYALNFDEGHNGDVDFEGDEYS--GGFQHFSDRFSAV-PASGKSSGAAVAS

A0A5A7ULQ3 Uncharacterized protein1.3e-6980.84Show/hide
Query:  MGDRDGGFKEIESIGEIDGADALLASRRYGCFCFPCFGQSRSASDELSWWERAKAKAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNR
        MGDRDG FKE+ES   IDGADALLAS+RY CFCFPCFG +RS SDELSWWER K KAKSTKFDGEDHWW+GGIRSLKKLREWSEIVAGPRWKTFIRRFNR
Subjt:  MGDRDGGFKEIESIGEIDGADALLASRRYGCFCFPCFGQSRSASDELSWWERAKAKAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNR

Query:  NRPAAVKPGKFQYDPISYALNFDEGH-NGDVDFEGD-EYS--GGFQHFSDRFSAVPASGKSSGAAVA
        NRPA VK GKFQYDPISYALNFDEGH NGDVDFEG+ EY+  GGFQ+FSDRF+AVP +   S ++ A
Subjt:  NRPAAVKPGKFQYDPISYALNFDEGH-NGDVDFEGD-EYS--GGFQHFSDRFSAVPASGKSSGAAVA

A0A5D3BLD0 Uncharacterized protein1.1e-6880.24Show/hide
Query:  MGDRDGGFKEIESIGEIDGADALLASRRYGCFCFPCFGQSRSASDELSWWERAKAKAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNR
        MGDRDG FKE+ES   IDGADALLAS+RY CFCFPCFG +RS SDELSWWER K KAKSTKFDGEDHWW+G IRSLKKLREWSEIVAGPRWKTFIRRFNR
Subjt:  MGDRDGGFKEIESIGEIDGADALLASRRYGCFCFPCFGQSRSASDELSWWERAKAKAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNR

Query:  NRPAAVKPGKFQYDPISYALNFDEGH-NGDVDFEGD-EYS--GGFQHFSDRFSAVPASGKSSGAAVA
        NRPA VK GKFQYDPISYALNFDEGH NGDVDFEG+ EY+  GGFQ+FSDRF+AVP +   S ++ A
Subjt:  NRPAAVKPGKFQYDPISYALNFDEGH-NGDVDFEGD-EYS--GGFQHFSDRFSAVPASGKSSGAAVA

A0A6J1ED51 uncharacterized protein LOC1114314565.6e-8998.78Show/hide
Query:  MGDRDGGFKEIESIGEIDGADALLASRRYGCFCFPCFGQSRSASDELSWWERAKAKAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNR
        MGDRDGGFKEIESIGEIDGADALLASRRYGCFCFPCFGQSRSASDELSWWERAKAKAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNR
Subjt:  MGDRDGGFKEIESIGEIDGADALLASRRYGCFCFPCFGQSRSASDELSWWERAKAKAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNR

Query:  NRPAAVKPGKFQYDPISYALNFDEGHNGDVDFEGDEYSGGFQHFSDRFSAVPASGKSSGAAVAS
        NRPAAVK GKFQYDPISYALNFDEGHNGDVDFEGDEYSGGFQ+FSDRFSAVPASGKSSGAAVAS
Subjt:  NRPAAVKPGKFQYDPISYALNFDEGHNGDVDFEGDEYSGGFQHFSDRFSAVPASGKSSGAAVAS

A0A6J1KJ01 uncharacterized protein LOC1114950355.3e-8796.95Show/hide
Query:  MGDRDGGFKEIESIGEIDGADALLASRRYGCFCFPCFGQSRSASDELSWWERAKAKAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNR
        MGDRDGGFKEIESIGEIDGADALLASRRY CFCFPCFGQSRSASDELSWWERAKAKAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNR
Subjt:  MGDRDGGFKEIESIGEIDGADALLASRRYGCFCFPCFGQSRSASDELSWWERAKAKAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNR

Query:  NRPAAVKPGKFQYDPISYALNFDEGHNGDVDFEGDEYSGGFQHFSDRFSAVPASGKSSGAAVAS
        NRPAAVK GKFQYDPISYALNFDEGHNGDV+FEGDEYSGGFQ+FSDRFSAVPAS KSSGAAVAS
Subjt:  NRPAAVKPGKFQYDPISYALNFDEGHNGDVDFEGDEYSGGFQHFSDRFSAVPASGKSSGAAVAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01430.1 BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1)1.0e-1835.63Show/hide
Query:  IGEIDGADAL---LASRRYGCFCFPCFGQSRSASDELS-WWERAKAKAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNR-------
        I E+D  D +   L ++R  CF  PC   S+ ++   S WW+R        K + ++ WW   IR  +++REWSE+VAGPRWKT+IRRF R+        
Subjt:  IGEIDGADAL---LASRRYGCFCFPCFGQSRSASDELS-WWERAKAKAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNR-------

Query:  ---------------PAAVKPGKFQYDPISYALNFDEGH-NGDVDFEGDEYSGGFQHFSDRFSA--VPASGKSS
                         +   GKF+YD +SY+LNFD+G+  G  D   DE+   ++ +S RF+A  +P S K S
Subjt:  ---------------PAAVKPGKFQYDPISYALNFDEGH-NGDVDFEGDEYSGGFQHFSDRFSA--VPASGKSS

AT3G48020.1 unknown protein1.6e-1944.96Show/hide
Query:  PCFGQSRSASDEL--SWWERAKAKAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPAAV---KPGKFQYDPISYALNFDEGHNGD
        P  G+S   S  +  SWW+R            E  WW   +R+  K+REWSEIVAGPRWKTFIRRFNR+           KF+YDP+SY L+F++    D
Subjt:  PCFGQSRSASDEL--SWWERAKAKAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPAAV---KPGKFQYDPISYALNFDEGHNGD

Query:  VDFEGDEYSGGFQHFSDRFSAVP-ASGKS
         D  G    GG + FS R+++VP ASGKS
Subjt:  VDFEGDEYSGGFQHFSDRFSAVP-ASGKS

AT5G14890.1 NHL domain-containing protein2.1e-1939.77Show/hide
Query:  FKEIES--IGEIDGADAL---LASRRYGCFCFPCFGQSRSASDELS-WWERAKAKAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNR-
        F  +ES  I E+D  D +   + ++R  CF  PC G S+ +    S WW+R +      K + ++ WW  G     K+REWSEIVAGP+WKTFIRRF R 
Subjt:  FKEIES--IGEIDGADAL---LASRRYGCFCFPCFGQSRSASDELS-WWERAKAKAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNR-

Query:  -----------NRPAAVKPGKFQYDPISYALNFDEGHNGDVDFEGDEYSGGFQHFSDRFSA--VPASGKSS
                   NRP  V    F+YD  SY+LNFD+G      FE DE+   ++ +S RF+A  +P S K S
Subjt:  -----------NRPAAVKPGKFQYDPISYALNFDEGHNGDVDFEGDEYSGGFQHFSDRFSA--VPASGKSS

AT5G25240.1 unknown protein2.2e-0835.92Show/hide
Query:  GCFCFPCFGQSRSASDELSWWERAKAKAKST-KFDG---EDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPAAVKPGKFQYDPISYALNFDEG
        GC  F  F  +R        W R   +++S   + G   E+   + G   LK L+E SE +AGP+WK FIR F+  R    +   F YD  +Y+LNFD+G
Subjt:  GCFCFPCFGQSRSASDELSWWERAKAKAKST-KFDG---EDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPAAVKPGKFQYDPISYALNFDEG

Query:  HNG
         +G
Subjt:  HNG

AT5G62865.1 unknown protein1.7e-2147.22Show/hide
Query:  CFCFPCFGQSRSASD-ELSWWERAKA---KAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPAA---VKPGKFQYDPISYALNFD
        C CFP F +SRS++    S W R +       S     E  WW   IR+  K+REWSEIVAGPRWKTFIRRFNR+           KFQYDP+SY+LNFD
Subjt:  CFCFPCFGQSRSASD-ELSWWERAKA---KAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPAA---VKPGKFQYDPISYALNFD

Query:  EGHNGDVDFEGDEY--SGGFQHFSDRFSAVPA-SGKSSGAAVAS
        +      D E DEY   GG + FS RF++VP  SGK+   +  S
Subjt:  EGHNGDVDFEGDEY--SGGFQHFSDRFSAVPA-SGKSSGAAVAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGACCGTGACGGCGGTTTCAAAGAAATAGAATCAATCGGAGAAATCGACGGCGCCGATGCTCTTTTGGCGTCTAGACGCTATGGTTGTTTTTGCTTCCCTTGCTT
TGGACAAAGCCGGTCGGCTTCCGACGAACTTTCTTGGTGGGAACGGGCGAAGGCGAAAGCGAAATCGACGAAGTTCGACGGTGAGGATCATTGGTGGAGTGGAGGAATCA
GATCTCTCAAGAAGCTTCGTGAATGGTCCGAGATCGTCGCTGGTCCGAGATGGAAGACCTTCATTCGCCGGTTCAATCGGAACCGGCCTGCCGCCGTGAAGCCTGGGAAA
TTCCAATATGATCCCATCAGTTACGCTTTGAATTTCGACGAGGGACATAACGGTGATGTGGATTTCGAAGGGGATGAATACAGCGGCGGGTTTCAACACTTCTCCGACCG
GTTTTCCGCCGTGCCGGCGTCGGGGAAGTCGTCGGGCGCGGCGGTGGCTAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGGACCGTGACGGCGGTTTCAAAGAAATAGAATCAATCGGAGAAATCGACGGCGCCGATGCTCTTTTGGCGTCTAGACGCTATGGTTGTTTTTGCTTCCCTTGCTT
TGGACAAAGCCGGTCGGCTTCCGACGAACTTTCTTGGTGGGAACGGGCGAAGGCGAAAGCGAAATCGACGAAGTTCGACGGTGAGGATCATTGGTGGAGTGGAGGAATCA
GATCTCTCAAGAAGCTTCGTGAATGGTCCGAGATCGTCGCTGGTCCGAGATGGAAGACCTTCATTCGCCGGTTCAATCGGAACCGGCCTGCCGCCGTGAAGCCTGGGAAA
TTCCAATATGATCCCATCAGTTACGCTTTGAATTTCGACGAGGGACATAACGGTGATGTGGATTTCGAAGGGGATGAATACAGCGGCGGGTTTCAACACTTCTCCGACCG
GTTTTCCGCCGTGCCGGCGTCGGGGAAGTCGTCGGGCGCGGCGGTGGCTAGTTAG
Protein sequenceShow/hide protein sequence
MGDRDGGFKEIESIGEIDGADALLASRRYGCFCFPCFGQSRSASDELSWWERAKAKAKSTKFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPAAVKPGK
FQYDPISYALNFDEGHNGDVDFEGDEYSGGFQHFSDRFSAVPASGKSSGAAVAS