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Carg07691 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07691
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTranscription factor PAR1-like
Genome locationCarg_Chr13:8471389..8472446
RNA-Seq ExpressionCarg07691
SyntenyCarg07691
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR044549 - Transcription factor IBH1-like, bHLH domain
IPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055213.1 transcription factor PAR1-like [Cucumis melo var. makuwa]5.0e-1977.61Show/hide
Query:  CHLNV--PALKRKRREARQVRRKVQKLRWVVPGGRGLQQEHLFAKTAHYILHLRLKVCALQTILKLQ
        CH NV   + KRKRREAR+VRRKVQKLRWVVPGGRGL++EHLFA+TA+YILHL+LKVCAL+++LKLQ
Subjt:  CHLNV--PALKRKRREARQVRRKVQKLRWVVPGGRGLQQEHLFAKTAHYILHLRLKVCALQTILKLQ

KAG6573044.1 Ubiquitin-conjugating enzyme E2 5, partial [Cucurbita argyrosperma subsp. sororia]1.6e-0966.67Show/hide
Query:  LKRKRREARQVRRKVQKLRWVVPGGRGLQQEHLFAKTAHYILHLRLKVCALQTILKL
        LKRKRREAR++RRKVQKLRWVV GGR L++EHLFAKTA YIL+L   +     +L L
Subjt:  LKRKRREARQVRRKVQKLRWVVPGGRGLQQEHLFAKTAHYILHLRLKVCALQTILKL

KAG6584233.1 hypothetical protein SDJN03_20165, partial [Cucurbita argyrosperma subsp. sororia]1.0e-7296Show/hide
Query:  MNLFGDTKLRYDDDLSESESLNESALLCALNWIDSFLSDPNGYTDQNSTSLLFKELDKPQHVGDDQVTS-----SIESMGSSCHLNVPALKRKRREARQV
        MNLFGDTKLRYDDDLSESESLNESALLC LNWIDSFLSDPNGYTDQNSTSLLFKELDKPQHVGDDQVTS     SIESMGSSCHLNVPALKRKRREARQV
Subjt:  MNLFGDTKLRYDDDLSESESLNESALLCALNWIDSFLSDPNGYTDQNSTSLLFKELDKPQHVGDDQVTS-----SIESMGSSCHLNVPALKRKRREARQV

Query:  RRKVQKLRWVVPGGRGLQQEHLFAKTAHYILHLRLKVCALQTILKLQDEA
        RRKVQKLRWVVPGGRGLQQEHLFAKTAHYILHLRLKVCALQTILKLQDEA
Subjt:  RRKVQKLRWVVPGGRGLQQEHLFAKTAHYILHLRLKVCALQTILKLQDEA

KAG7019830.1 hypothetical protein SDJN02_18794, partial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-75100Show/hide
Query:  MNLFGDTKLRYDDDLSESESLNESALLCALNWIDSFLSDPNGYTDQNSTSLLFKELDKPQHVGDDQVTSSIESMGSSCHLNVPALKRKRREARQVRRKVQ
        MNLFGDTKLRYDDDLSESESLNESALLCALNWIDSFLSDPNGYTDQNSTSLLFKELDKPQHVGDDQVTSSIESMGSSCHLNVPALKRKRREARQVRRKVQ
Subjt:  MNLFGDTKLRYDDDLSESESLNESALLCALNWIDSFLSDPNGYTDQNSTSLLFKELDKPQHVGDDQVTSSIESMGSSCHLNVPALKRKRREARQVRRKVQ

Query:  KLRWVVPGGRGLQQEHLFAKTAHYILHLRLKVCALQTILKLQDEA
        KLRWVVPGGRGLQQEHLFAKTAHYILHLRLKVCALQTILKLQDEA
Subjt:  KLRWVVPGGRGLQQEHLFAKTAHYILHLRLKVCALQTILKLQDEA

RVW47207.1 hypothetical protein CK203_070132 [Vitis vinifera]5.8e-0758.93Show/hide
Query:  KRKRREARQVRRKVQKLRWVVPGGRGLQQEHLFAKTAHYILHLRLKVCALQTILKL
        K +RR  R VRRKV+KL+ ++PGGRGLQ + LF +TA YILHLRL+V  LQ + K+
Subjt:  KRKRREARQVRRKVQKLRWVVPGGRGLQQEHLFAKTAHYILHLRLKVCALQTILKL

TrEMBL top hitse value%identityAlignment
A0A2G5F2J9 Uncharacterized protein2.4e-0650Show/hide
Query:  ESMGSSCHLNVPALKRKRREARQVRRKVQKLRWVVPGGRGLQQEHLFAKTAHYILHLRLKVCALQTILKL
        + M SS   N  +LKR+R   R V+ KV++L+ +VPGG+GL+ + LF +TA+YILHLRL+V  LQ + KL
Subjt:  ESMGSSCHLNVPALKRKRREARQVRRKVQKLRWVVPGGRGLQQEHLFAKTAHYILHLRLKVCALQTILKL

A0A438EHL0 BHLH domain-containing protein2.8e-0758.93Show/hide
Query:  KRKRREARQVRRKVQKLRWVVPGGRGLQQEHLFAKTAHYILHLRLKVCALQTILKL
        K +RR  R VRRKV+KL+ ++PGGRGLQ + LF +TA YILHLRL+V  LQ + K+
Subjt:  KRKRREARQVRRKVQKLRWVVPGGRGLQQEHLFAKTAHYILHLRLKVCALQTILKL

A0A438JND2 BHLH domain-containing protein2.8e-0758.93Show/hide
Query:  KRKRREARQVRRKVQKLRWVVPGGRGLQQEHLFAKTAHYILHLRLKVCALQTILKL
        K +RR  R VRRKV+KL+ ++PGGRGLQ + LF +TA YILHLRL+V  LQ + K+
Subjt:  KRKRREARQVRRKVQKLRWVVPGGRGLQQEHLFAKTAHYILHLRLKVCALQTILKL

A0A5A7UGX9 Transcription factor PAR1-like2.4e-1977.61Show/hide
Query:  CHLNV--PALKRKRREARQVRRKVQKLRWVVPGGRGLQQEHLFAKTAHYILHLRLKVCALQTILKLQ
        CH NV   + KRKRREAR+VRRKVQKLRWVVPGGRGL++EHLFA+TA+YILHL+LKVCAL+++LKLQ
Subjt:  CHLNV--PALKRKRREARQVRRKVQKLRWVVPGGRGLQQEHLFAKTAHYILHLRLKVCALQTILKLQ

A0A5N6RR97 Uncharacterized protein2.8e-0760Show/hide
Query:  RKRREARQVRRKVQKLRWVVPGGRGLQQEHLFAKTAHYILHLRLKVCALQTILKL
        R +R  R V+ KVQKL+ +VPGG GLQ ++LFA+TA+YILHLRL+V AL+++L+L
Subjt:  RKRREARQVRRKVQKLRWVVPGGRGLQQEHLFAKTAHYILHLRLKVCALQTILKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTGTTCGGAGATACAAAGCTTCGGTATGACGACGACCTTTCGGAATCTGAAAGTTTGAATGAATCTGCTCTGCTGTGTGCTTTGAACTGGATTGATTCATTCCT
GAGTGACCCAAATGGTTATACAGATCAGAATTCCACTTCCCTTCTCTTCAAGGAACTGGATAAGCCACAGCATGTGGGTGATGACCAAGTAACCAGCTCTATTGAATCTA
TGGGTTCCTCTTGCCATCTGAATGTGCCTGCTTTGAAGAGGAAGAGGAGAGAAGCGCGCCAGGTTCGCCGGAAAGTGCAGAAGCTCCGGTGGGTTGTGCCCGGTGGGAGA
GGGTTGCAACAGGAACATCTCTTCGCCAAAACGGCTCATTATATACTGCATTTGAGATTGAAAGTCTGTGCTCTTCAAACCATTCTCAAATTGCAGGATGAGGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTTGTTCGGAGATACAAAGCTTCGGTATGACGACGACCTTTCGGAATCTGAAAGTTTGAATGAATCTGCTCTGCTGTGTGCTTTGAACTGGATTGATTCATTCCT
GAGTGACCCAAATGGTTATACAGATCAGAATTCCACTTCCCTTCTCTTCAAGGAACTGGATAAGCCACAGCATGTGGGTGATGACCAAGTAACCAGCTCTATTGAATCTA
TGGGTTCCTCTTGCCATCTGAATGTGCCTGCTTTGAAGAGGAAGAGGAGAGAAGCGCGCCAGGTTCGCCGGAAAGTGCAGAAGCTCCGGTGGGTTGTGCCCGGTGGGAGA
GGGTTGCAACAGGAACATCTCTTCGCCAAAACGGCTCATTATATACTGCATTTGAGATTGAAAGTCTGTGCTCTTCAAACCATTCTCAAATTGCAGGATGAGGCTTGA
Protein sequenceShow/hide protein sequence
MNLFGDTKLRYDDDLSESESLNESALLCALNWIDSFLSDPNGYTDQNSTSLLFKELDKPQHVGDDQVTSSIESMGSSCHLNVPALKRKRREARQVRRKVQKLRWVVPGGR
GLQQEHLFAKTAHYILHLRLKVCALQTILKLQDEA