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Carg07700 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07700
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionB12D
Genome locationCarg_Chr13:8522100..8523096
RNA-Seq ExpressionCarg07700
SyntenyCarg07700
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR010530 - NADH-ubiquinone reductase complex 1 MLRQ subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN64280.1 hypothetical protein Csa_013651 [Cucumis sativus]1.2e-4292.55Show/hide
Query:  MAPST-VNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPS+ ++RWLRPEVYPLFAAVGVAVGICGFQL+RNICINPEVRVTKENRAAGVLDNFAEGEKY+EHFLRKFVRNKSPEIMPSINNFFTDP+RN
Subjt:  MAPST-VNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
XP_008437938.1 PREDICTED: uncharacterized protein LOC103483212 [Cucumis melo]5.5e-4393.62Show/hide
Query:  MAP-STVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAP ST++RWLRPEVYPLFAAVGVAVGICGFQL+RNICINPEVRV+KENRAAGVLDNFAEGEKY+EHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAP-STVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
XP_022137737.1 uncharacterized protein LOC111009092 [Momordica charantia]2.2e-4495.7Show/hide
Query:  MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPSTV+RWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRV+KENR+AGVLDNFAEGEKY EHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
XP_022924187.1 uncharacterized protein LOC111431708 [Cucurbita moschata]2.4e-46100Show/hide
Query:  MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
XP_023000853.1 uncharacterized protein LOC111495175 [Cucurbita maxima]1.2e-4598.92Show/hide
Query:  MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNF EGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
TrEMBL top hitse value%identityAlignment
A0A1S3AVT0 uncharacterized protein LOC1034832122.6e-4393.62Show/hide
Query:  MAP-STVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAP ST++RWLRPEVYPLFAAVGVAVGICGFQL+RNICINPEVRV+KENRAAGVLDNFAEGEKY+EHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAP-STVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
A0A5A7UIX5 Uncharacterized protein2.6e-4393.62Show/hide
Query:  MAP-STVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAP ST++RWLRPEVYPLFAAVGVAVGICGFQL+RNICINPEVRV+KENRAAGVLDNFAEGEKY+EHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAP-STVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
A0A6J1C941 uncharacterized protein LOC1110090921.1e-4495.7Show/hide
Query:  MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPSTV+RWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRV+KENR+AGVLDNFAEGEKY EHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
A0A6J1E888 uncharacterized protein LOC1114317081.1e-46100Show/hide
Query:  MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
A0A6J1KNV1 uncharacterized protein LOC1114951755.7e-4698.92Show/hide
Query:  MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNF EGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G29970.1 B12D protein5.7e-2249.4Show/hide
Query:  VNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFT
        + RW+RPEVYPL  A+G    +  FQL RN  +NP+ R+ KE+R  G+L+N  EGEKY +H  RK++R + P++MPS+N FF+
Subjt:  VNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFT
AT3G48140.1 B12D protein4.0e-3680Show/hide
Query:  NRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPS
        +RWLRPEVYPLFAA GVAVGIC F L+RNI  NPEVR TKENRAAG+LDN AEGEKY E+FLRKFVRNK PEIMP +N FFTDP+
Subjt:  NRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCTTCCACCGTTAATCGATGGCTGAGACCTGAGGTTTACCCACTTTTCGCGGCGGTAGGAGTGGCCGTCGGAATCTGCGGGTTTCAGTTAGTCCGTAACATCTG
CATCAATCCTGAAGTCAGAGTGACCAAGGAGAATAGAGCCGCCGGAGTCCTGGATAACTTTGCTGAGGGAGAGAAGTATACCGAGCATTTCCTGAGGAAATTCGTGCGCA
ACAAGTCACCAGAAATTATGCCGTCAATCAACAACTTCTTCACAGACCCAAGTCGAAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCTTCCACCGTTAATCGATGGCTGAGACCTGAGGTTTACCCACTTTTCGCGGCGGTAGGAGTGGCCGTCGGAATCTGCGGGTTTCAGTTAGTCCGTAACATCTG
CATCAATCCTGAAGTCAGAGTGACCAAGGAGAATAGAGCCGCCGGAGTCCTGGATAACTTTGCTGAGGGAGAGAAGTATACCGAGCATTTCCTGAGGAAATTCGTGCGCA
ACAAGTCACCAGAAATTATGCCGTCAATCAACAACTTCTTCACAGACCCAAGTCGAAACTAA
Protein sequenceShow/hide protein sequence
MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN