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Carg07719 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07719
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein PXR1
Genome locationCarg_Chr13:8611034..8611342
RNA-Seq ExpressionCarg07719
SyntenyCarg07719
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584261.1 hypothetical protein SDJN03_20193, partial [Cucurbita argyrosperma subsp. sororia]4.3e-3396.08Show/hide
Query:  MGGTSEEKHEGKVEKKEKKKDKEKHEEEEEEEDDDHGKKKGKDKDKEEAEKKEKKKKDPADMKDPLKLRQKLEKLEAKMQALAVKKEEILKLIHEAEQNA
        MGGTSEEKHEGKVEKKEKKKDKEKH  EEEEEDDDH KKKGKDKDKEE EKKEKKKKDPADMKDPLKLRQKLEKLEAKMQALAVKKEEILKLIHEAEQNA
Subjt:  MGGTSEEKHEGKVEKKEKKKDKEKHEEEEEEEDDDHGKKKGKDKDKEEAEKKEKKKKDPADMKDPLKLRQKLEKLEAKMQALAVKKEEILKLIHEAEQNA

Query:  AP
        AP
Subjt:  AP

KAG7019857.1 hypothetical protein SDJN02_18822, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-36100Show/hide
Query:  MGGTSEEKHEGKVEKKEKKKDKEKHEEEEEEEDDDHGKKKGKDKDKEEAEKKEKKKKDPADMKDPLKLRQKLEKLEAKMQALAVKKEEILKLIHEAEQNA
        MGGTSEEKHEGKVEKKEKKKDKEKHEEEEEEEDDDHGKKKGKDKDKEEAEKKEKKKKDPADMKDPLKLRQKLEKLEAKMQALAVKKEEILKLIHEAEQNA
Subjt:  MGGTSEEKHEGKVEKKEKKKDKEKHEEEEEEEDDDHGKKKGKDKDKEEAEKKEKKKKDPADMKDPLKLRQKLEKLEAKMQALAVKKEEILKLIHEAEQNA

Query:  AP
        AP
Subjt:  AP

XP_022923831.1 protein PXR1 [Cucurbita moschata]7.6e-3091.35Show/hide
Query:  MGGTSEEKHEGKVEKKEKKKDKEKHEEEEEEEDDDHGKKKG--KDKDKEEAEKKEKKKKDPADMKDPLKLRQKLEKLEAKMQALAVKKEEILKLIHEAEQ
        MGGTSEEKHEGKVEKKEKKKDKEKHEEEE    DDHGKKKG  KDKDKE  EKKEKKKKDPADMKDPLKLRQKLEKLE KMQALAVKKEEILKLIHEAEQ
Subjt:  MGGTSEEKHEGKVEKKEKKKDKEKHEEEEEEEDDDHGKKKG--KDKDKEEAEKKEKKKKDPADMKDPLKLRQKLEKLEAKMQALAVKKEEILKLIHEAEQ

Query:  NAAP
        NAAP
Subjt:  NAAP

XP_022994123.1 protein PXR1 [Cucurbita maxima]6.0e-1974.76Show/hide
Query:  MGGTSEEKHEGKVEKKEKKKDKEKHEEEEEEEDDDHGKKKGKDKDKE--EAEKKEKKKKDPADMKDPLKLRQKLEKLEAKMQALAVKKEEILKLIHEAEQ
        MGG SEEKHE KVEKKEKK         EEE D+   +KKGKDKDKE  E EKKEKK KDPAD KDP KLRQKLEKLE KMQALAVKKEE+LKL+HEAEQ
Subjt:  MGGTSEEKHEGKVEKKEKKKDKEKHEEEEEEEDDDHGKKKGKDKDKE--EAEKKEKKKKDPADMKDPLKLRQKLEKLEAKMQALAVKKEEILKLIHEAEQ

Query:  NAA
        NAA
Subjt:  NAA

XP_023519141.1 protein PXR1 [Cucurbita pepo subsp. pepo]7.6e-3091.35Show/hide
Query:  MGGTSEEKHEGKVEKKEKKKDKEKHEEEEEEEDDDHGKKKG--KDKDKEEAEKKEKKKKDPADMKDPLKLRQKLEKLEAKMQALAVKKEEILKLIHEAEQ
        MGGTSEEKHEGKVEKKEKKKDK KHEEEE    DDHGKKKG  KDKDKEE EKKEKKKKDPADMKDPLKLRQKLEKLE KMQALAVKKEEILKLIHEAEQ
Subjt:  MGGTSEEKHEGKVEKKEKKKDKEKHEEEEEEEDDDHGKKKG--KDKDKEEAEKKEKKKKDPADMKDPLKLRQKLEKLEAKMQALAVKKEEILKLIHEAEQ

Query:  NAAP
        NAAP
Subjt:  NAAP

TrEMBL top hitse value%identityAlignment
A0A0A0LQQ8 Uncharacterized protein6.1e-1769.23Show/hide
Query:  MGGTSEEKHEGKVEKKEK--KKDKEKHEEEEEEEDDDHGKKKGKDKDKEEAEKKEKKKKDPADMKDPLKLRQKLEKLEAKMQALAVKKEEILKLIHEAEQ
        MG TSEEKHEG+VEKKEK  KKDKEKH EE E+               EE +KK+KK+KDPAD KDP KLRQKLEKLE KMQALAVKKEEILKL+HEAEQ
Subjt:  MGGTSEEKHEGKVEKKEK--KKDKEKHEEEEEEEDDDHGKKKGKDKDKEEAEKKEKKKKDPADMKDPLKLRQKLEKLEAKMQALAVKKEEILKLIHEAEQ

Query:  NAAP
        N  P
Subjt:  NAAP

A0A1S3AV24 protein PXR12.3e-1669.61Show/hide
Query:  MGGTSEEKHEGKVEKKEKKKDKEKHEEEEEEEDDDHGKKKGKDKDKEEAEKKEKKKKDPADMKDPLKLRQKLEKLEAKMQALAVKKEEILKLIHEAEQNA
        MG TSEEKHEGKVEKKE KKDKEKH E E+EE                 +KK+KK+K+PAD KDP KLRQKLEKLEAKMQALAVKKEEILKL+HEAEQN 
Subjt:  MGGTSEEKHEGKVEKKEKKKDKEKHEEEEEEEDDDHGKKKGKDKDKEEAEKKEKKKKDPADMKDPLKLRQKLEKLEAKMQALAVKKEEILKLIHEAEQNA

Query:  AP
         P
Subjt:  AP

A0A6J1C8D9 nucleolar protein 583.5e-1267.31Show/hide
Query:  MGGTSEEKHEG-KVEKKEK--KKDKEKHEEEEEEEDDDHGKKKGKDKDKEEAEKKEKKKKDPADMKDPLKLRQKLEKLEAKMQALAVKKEEILKLIHEAE
        MG  SEEKHEG +VEKKEK  KKDKEKHEE E  E    G+KK         EKKEKKKK+P D KDP KLRQKLEKLE KM+ LA+KKEE+LKL+ EAE
Subjt:  MGGTSEEKHEG-KVEKKEK--KKDKEKHEEEEEEEDDDHGKKKGKDKDKEEAEKKEKKKKDPADMKDPLKLRQKLEKLEAKMQALAVKKEEILKLIHEAE

Query:  QNAA
        QNAA
Subjt:  QNAA

A0A6J1E7S6 protein PXR13.7e-3091.35Show/hide
Query:  MGGTSEEKHEGKVEKKEKKKDKEKHEEEEEEEDDDHGKKKG--KDKDKEEAEKKEKKKKDPADMKDPLKLRQKLEKLEAKMQALAVKKEEILKLIHEAEQ
        MGGTSEEKHEGKVEKKEKKKDKEKHEEEE    DDHGKKKG  KDKDKE  EKKEKKKKDPADMKDPLKLRQKLEKLE KMQALAVKKEEILKLIHEAEQ
Subjt:  MGGTSEEKHEGKVEKKEKKKDKEKHEEEEEEEDDDHGKKKG--KDKDKEEAEKKEKKKKDPADMKDPLKLRQKLEKLEAKMQALAVKKEEILKLIHEAEQ

Query:  NAAP
        NAAP
Subjt:  NAAP

A0A6J1K499 protein PXR12.9e-1974.76Show/hide
Query:  MGGTSEEKHEGKVEKKEKKKDKEKHEEEEEEEDDDHGKKKGKDKDKE--EAEKKEKKKKDPADMKDPLKLRQKLEKLEAKMQALAVKKEEILKLIHEAEQ
        MGG SEEKHE KVEKKEKK         EEE D+   +KKGKDKDKE  E EKKEKK KDPAD KDP KLRQKLEKLE KMQALAVKKEE+LKL+HEAEQ
Subjt:  MGGTSEEKHEGKVEKKEKKKDKEKHEEEEEEEDDDHGKKKGKDKDKE--EAEKKEKKKKDPADMKDPLKLRQKLEKLEAKMQALAVKKEEILKLIHEAEQ

Query:  NAA
        NAA
Subjt:  NAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G62750.1 unknown protein3.9e-0851.55Show/hide
Query:  EEKHE--GKVEKKEKKKDKEKHEEEEEEEDDDHGKKKGKDKDK--EEAEKKEKKKKDPADMKDPLKLRQKLEKLEAKMQALAVKKEEILKLIHEAEQ
        EE+H    K EKKEKKKDK+K  +++ E+D + G ++G+D++K  ++ +KK KK+K+P D KDP KL+ KL+K+E K+QA+ +KK+EI+KLIH+AEQ
Subjt:  EEKHE--GKVEKKEKKKDKEKHEEEEEEEDDDHGKKKGKDKDK--EEAEKKEKKKKDPADMKDPLKLRQKLEKLEAKMQALAVKKEEILKLIHEAEQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGAACCTCGGAAGAGAAGCACGAGGGTAAGGTTGAGAAGAAGGAGAAGAAGAAAGATAAGGAGAAACATGAAGAAGAAGAAGAAGAAGAAGATGATGATCATGG
TAAAAAGAAGGGAAAAGATAAGGATAAGGAAGAAGCTGAAAAGAAAGAGAAGAAGAAAAAGGACCCTGCAGATATGAAGGATCCATTAAAGCTCAGACAGAAGCTTGAGA
AGCTTGAAGCCAAGATGCAGGCTCTGGCGGTTAAGAAGGAAGAGATATTGAAACTGATCCATGAAGCTGAACAGAATGCTGCTCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGAACCTCGGAAGAGAAGCACGAGGGTAAGGTTGAGAAGAAGGAGAAGAAGAAAGATAAGGAGAAACATGAAGAAGAAGAAGAAGAAGAAGATGATGATCATGG
TAAAAAGAAGGGAAAAGATAAGGATAAGGAAGAAGCTGAAAAGAAAGAGAAGAAGAAAAAGGACCCTGCAGATATGAAGGATCCATTAAAGCTCAGACAGAAGCTTGAGA
AGCTTGAAGCCAAGATGCAGGCTCTGGCGGTTAAGAAGGAAGAGATATTGAAACTGATCCATGAAGCTGAACAGAATGCTGCTCCATGA
Protein sequenceShow/hide protein sequence
MGGTSEEKHEGKVEKKEKKKDKEKHEEEEEEEDDDHGKKKGKDKDKEEAEKKEKKKKDPADMKDPLKLRQKLEKLEAKMQALAVKKEEILKLIHEAEQNAAP