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Carg07738 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07738
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPectinesterase
Genome locationCarg_Chr13:8697078..8706998
RNA-Seq ExpressionCarg07738
SyntenyCarg07738
Gene Ontology termsGO:0042545 - cell wall modification (biological process)
GO:0030599 - pectinesterase activity (molecular function)
InterPro domainsIPR000070 - Pectinesterase, catalytic
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584281.1 putative pectinesterase/pectinesterase inhibitor 39, partial [Cucurbita argyrosperma subsp. sororia]1.1e-4264.71Show/hide
Query:  DCRIYARLLNNIVKVTAQSEESIQLQLSGFSFQDC--------------------------TVIFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNRG
        DCRIYARLLNN V VTAQS+E  + QLSGFSFQ+C                          TVIFMESFL+SV+N  GWSEWSNSSSLKLLFY+EY NRG
Subjt:  DCRIYARLLNNIVKVTAQSEESIQLQLSGFSFQDC--------------------------TVIFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNRG

Query:  LGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIPYRPD
         GANLSG      VKWPGFHAIENRK+A +F+VRQFINGTTWL E G+PYRPD
Subjt:  LGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIPYRPD

KAG6584282.1 putative pectinesterase/pectinesterase inhibitor 39, partial [Cucurbita argyrosperma subsp. sororia]3.4e-4466.01Show/hide
Query:  DCRIYARLLNNIVKVTAQSEESIQLQLSGFSFQDC--------------------------TVIFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNRG
        DCRIYARLLNN V VTAQS+E+ QLQLSGFSFQ+C                          TVIFMESFL+SV+N  GWSEWSNSSSLKLLFY+EY NRG
Subjt:  DCRIYARLLNNIVKVTAQSEESIQLQLSGFSFQDC--------------------------TVIFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNRG

Query:  LGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIPYRPD
         GANLSG      VKWPGFHAIENRK+A +F+VRQFINGTTWL E G+PYRPD
Subjt:  LGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIPYRPD

KAG6584284.1 putative pectinesterase/pectinesterase inhibitor 42, partial [Cucurbita argyrosperma subsp. sororia]3.9e-4062.99Show/hide
Query:  DCRIYARLLNNIVKVTAQSEESIQLQLSGFSFQDC--------------------------TVIFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNRG
        DCRIYARLLNNIV VTAQS+E  +LQLSG SFQ+C                          TVIFMESFL+SV+N  GWSEW NSSSLKLLFY+EY NRG
Subjt:  DCRIYARLLNNIVKVTAQSEESIQLQLSGFSFQDC--------------------------TVIFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNRG

Query:  LGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWL-LEIGIPYRPD
         GANLS       VKW GFHAIENRK+A +F+VRQFINGTTWL +E G+PYRPD
Subjt:  LGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWL-LEIGIPYRPD

KAG7019876.1 Pectinesterase 1, partial [Cucurbita argyrosperma subsp. argyrosperma]8.9e-77100Show/hide
Query:  DCRIYARLLNNIVKVTAQSEESIQLQLSGFSFQDCTVIFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNRGLGANLSGGVKWPGVKWPGFHAIENRK
        DCRIYARLLNNIVKVTAQSEESIQLQLSGFSFQDCTVIFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNRGLGANLSGGVKWPGVKWPGFHAIENRK
Subjt:  DCRIYARLLNNIVKVTAQSEESIQLQLSGFSFQDCTVIFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNRGLGANLSGGVKWPGVKWPGFHAIENRK

Query:  KAIQFTVRQFINGTTWLLEIGIPYRPDRELTYTEESNGQDSMQ
        KAIQFTVRQFINGTTWLLEIGIPYRPDRELTYTEESNGQDSMQ
Subjt:  KAIQFTVRQFINGTTWLLEIGIPYRPDRELTYTEESNGQDSMQ

KAG7019877.1 putative pectinesterase/pectinesterase inhibitor 39, partial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-4364.05Show/hide
Query:  DCRIYARLLNNIVKVTAQSEESIQLQLSGFSFQDC--------------------------TVIFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNRG
        DCRIYARLLNN V VTAQS+++I+ QLSGFSFQ+C                          TVIFMESFL+SV+N  GWSEWSNSSSLKLLFY+EY NRG
Subjt:  DCRIYARLLNNIVKVTAQSEESIQLQLSGFSFQDC--------------------------TVIFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNRG

Query:  LGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIPYRPD
         GANLSG      VKWPGFHAIENRK+A +F+VR+FINGTTWL E G+PYRPD
Subjt:  LGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIPYRPD

TrEMBL top hitse value%identityAlignment
A0A0A0L1M3 Pectinesterase2.2e-2041.45Show/hide
Query:  DCRIYARLLNNIVKVTAQSEESIQLQLSGFSFQDC---------------------------TVIFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNR
        DC IYARL +  + VTAQS+ S+   LSGF FQ+C                            V+F++SFL++V+   GW EW       LL+Y+EY N 
Subjt:  DCRIYARLLNNIVKVTAQSEESIQLQLSGFSFQDC---------------------------TVIFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNR

Query:  GLGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIPYR
        G GAN S       V WPG+HA+ N K+   FTV  FINGT WL + GIP+R
Subjt:  GLGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIPYR

A0A6J1C9Z6 Pectinesterase2.2e-2543.51Show/hide
Query:  DCRIYARLLNNIVKVTAQSEESIQLQLSGFSFQDC----------------------------TVIFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVN
        DC+IY  L N  V +TAQS+E ++ + SGFSFQ+C                            TVIFM+SFL++V+N  GW EWS  S L LLFY+E+ N
Subjt:  DCRIYARLLNNIVKVTAQSEESIQLQLSGFSFQDC----------------------------TVIFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVN

Query:  RGLGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIPYRP
        RG GA++S       +KW G+H I N  +A ++TV+ FI+GTTWL E  +P+RP
Subjt:  RGLGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIPYRP

A0A6J1D381 Pectinesterase2.8e-2042.11Show/hide
Query:  DCRIYARLLNNIVKVTAQSEESIQLQLSGFSFQDC---------------------------TVIFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNR
        DC +YAR+L     +TAQS +S + Q SGF+FQ+C                           TVIFMESFL+ ++   GWSEW   + + LLFY+EY N 
Subjt:  DCRIYARLLNNIVKVTAQSEESIQLQLSGFSFQDC---------------------------TVIFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNR

Query:  GLGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIPYR
        G GA+ S       VKWPG+H + N  +A +FTV  FI+G  WL E GIP+R
Subjt:  GLGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIPYR

A0A6J1DAG5 Pectinesterase5.7e-2142.11Show/hide
Query:  DCRIYARLLNNIVKVTAQSEESIQLQLSGFSFQDCT---------------------------VIFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNR
        DC IYAR+    + VTAQS+ +++ Q SGF FQ+C                            VIFMESFL+ V+   GW EW     + LLFY+EY NR
Subjt:  DCRIYARLLNNIVKVTAQSEESIQLQLSGFSFQDCT---------------------------VIFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNR

Query:  GLGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIPYR
        G GA+ S       V WPG+H + N  +  +FTV  FINGT WL E GIP+R
Subjt:  GLGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIPYR

A0A6J1GIG0 Pectinesterase1.4e-1942.11Show/hide
Query:  DCRIYARLLNNIVKVTAQSEESIQLQLSGFSFQDCT---------------------------VIFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNR
        DC IYARL++    VTAQS+ ++  Q SGF FQ+CT                           V F+ESFL++V+   GW EW     + LL+Y EY NR
Subjt:  DCRIYARLLNNIVKVTAQSEESIQLQLSGFSFQDCT---------------------------VIFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNR

Query:  GLGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIPYR
        G GAN S       V WPGFH + +      FTV  FINGTTWL E  IP+R
Subjt:  GLGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIPYR

SwissProt top hitse value%identityAlignment
O49298 Probable pectinesterase/pectinesterase inhibitor 61.2e-1534.27Show/hide
Query:  DCRIYAR--LLNNIVKVTAQSEESIQLQLSGFSFQDCTV------------------IFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNRGLGANLS
        +C IYAR  +      +TAQS +    + +GF  Q  TV                  +FM+  L ++++  GW  WS S +L  L+Y EY N G GA++S
Subjt:  DCRIYAR--LLNNIVKVTAQSEESIQLQLSGFSFQDCTV------------------IFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNRGLGANLS

Query:  GGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIP
        G      VKWPG+H I+   +A +FTV  F++G  W+   G+P
Subjt:  GGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIP

O81415 Probable pectinesterase/pectinesterase inhibitor 394.5e-1542.53Show/hide
Query:  IFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNRGLGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIPY
        + ++SF++ +++  GW E     +L+ L+Y EY+N G GAN++       V WPGF  IEN+ +A QFTV  FI+G+TWL   GIP+
Subjt:  IFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNRGLGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIPY

P14280 Pectinesterase 12.0e-1542.53Show/hide
Query:  IFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNRGLGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIPY
        + MES+L  ++N  GW+EW    +LK L+Y E++N G GA  S       VKWPG+H I +  KA+ FTV + I G +WL   G+ Y
Subjt:  IFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNRGLGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIPY

Q8RXK7 Probable pectinesterase/pectinesterase inhibitor 413.8e-1430.07Show/hide
Query:  DCRIYAR--LLNNIVKVTAQSEESIQLQLSGFSFQDCTV---------------------------IFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYV
        DC +Y R  + N    +TAQ       Q +G S  +CT+                           +FM+S+++ V+   GW EW+   +L  L+Y+EY 
Subjt:  DCRIYAR--LLNNIVKVTAQSEESIQLQLSGFSFQDCTV---------------------------IFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYV

Query:  NRGLGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIPY
        N G G++ +       V WPG+H I N   A  FTV  F+ G  W+++ G+PY
Subjt:  NRGLGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIPY

Q96575 Pectinesterase 2.25.9e-1541.38Show/hide
Query:  IFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNRGLGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIPY
        + MES+L  ++N  GW+EW    +LK L+Y E++N G GA  S       VKWPG+H I +  +A+ FTV + I G +WL   G+ Y
Subjt:  IFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNRGLGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIPY

Arabidopsis top hitse value%identityAlignment
AT1G23200.1 Plant invertase/pectin methylesterase inhibitor superfamily8.4e-1734.27Show/hide
Query:  DCRIYAR--LLNNIVKVTAQSEESIQLQLSGFSFQDCTV------------------IFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNRGLGANLS
        +C IYAR  +      +TAQS +    + +GF  Q  TV                  +FM+  L ++++  GW  WS S +L  L+Y EY N G GA++S
Subjt:  DCRIYAR--LLNNIVKVTAQSEESIQLQLSGFSFQDCTV------------------IFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNRGLGANLS

Query:  GGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIP
        G      VKWPG+H I+   +A +FTV  F++G  W+   G+P
Subjt:  GGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIP

AT3G43270.1 Plant invertase/pectin methylesterase inhibitor superfamily3.5e-1539.08Show/hide
Query:  IFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNRGLGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIPY
        +FM+++++  +N  GW EW+ + +L  L+Y EY+N G GA+L        VKWPG+H +    +A  FTV Q I G  WL   GI +
Subjt:  IFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNRGLGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIPY

AT4G02300.1 Plant invertase/pectin methylesterase inhibitor superfamily3.2e-1642.53Show/hide
Query:  IFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNRGLGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIPY
        + ++SF++ +++  GW E     +L+ L+Y EY+N G GAN++       V WPGF  IEN+ +A QFTV  FI+G+TWL   GIP+
Subjt:  IFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNRGLGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIPY

AT4G02330.1 Plant invertase/pectin methylesterase inhibitor superfamily2.7e-1530.07Show/hide
Query:  DCRIYAR--LLNNIVKVTAQSEESIQLQLSGFSFQDCTV---------------------------IFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYV
        DC +Y R  + N    +TAQ       Q +G S  +CT+                           +FM+S+++ V+   GW EW+   +L  L+Y+EY 
Subjt:  DCRIYAR--LLNNIVKVTAQSEESIQLQLSGFSFQDCTV---------------------------IFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYV

Query:  NRGLGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIPY
        N G G++ +       V WPG+H I N   A  FTV  F+ G  W+++ G+PY
Subjt:  NRGLGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIPY

AT5G53370.1 pectin methylesterase PCR fragment F3.5e-1530.26Show/hide
Query:  CRIYAR--LLNNIVKVTAQSEESIQLQLSGFSFQDC---------------------------TVIFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVN
        C IYAR  +    + +TAQ+ +    Q +G S   C                            V++M S +   ++  GW EW+   +L  L+Y EY+N
Subjt:  CRIYAR--LLNNIVKVTAQSEESIQLQLSGFSFQDC---------------------------TVIFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVN

Query:  RGLGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIPY
        +GLG+ +        VKWPG+H I +  +A +FTV QFI+G++WL   G+ +
Subjt:  RGLGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQFINGTTWLLEIGIPY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATTGTAGAATTTACGCCCGACTACTAAATAACATTGTTAAAGTGACTGCACAATCGGAAGAAAGCATACAACTACAATTGAGTGGCTTTTCGTTTCAGGATTGCACTGT
AATTTTCATGGAATCATTTCTAAACTCAGTGCTGAATCTTACCGGATGGTCAGAATGGTCTAATAGTAGTTCTCTGAAATTATTATTTTATAGTGAGTATGTCAATAGAG
GGCTGGGGGCTAACTTATCCGGAGGAGTCAAATGGCCAGGAGTCAAATGGCCAGGATTCCATGCAATAGAGAATCGAAAAAAAGCCATTCAATTCACTGTACGACAATTT
ATTAATGGGACTACATGGTTGCTAGAAATTGGTATACCATATAGACCAGACCGGGAGCTAACTTATACGGAAGAGTCAAATGGCCAGGATTCCATGCAATAG
mRNA sequenceShow/hide mRNA sequence
GATTGTAGAATTTACGCCCGACTACTAAATAACATTGTTAAAGTGACTGCACAATCGGAAGAAAGCATACAACTACAATTGAGTGGCTTTTCGTTTCAGGATTGCACTGT
AATTTTCATGGAATCATTTCTAAACTCAGTGCTGAATCTTACCGGATGGTCAGAATGGTCTAATAGTAGTTCTCTGAAATTATTATTTTATAGTGAGTATGTCAATAGAG
GGCTGGGGGCTAACTTATCCGGAGGAGTCAAATGGCCAGGAGTCAAATGGCCAGGATTCCATGCAATAGAGAATCGAAAAAAAGCCATTCAATTCACTGTACGACAATTT
ATTAATGGGACTACATGGTTGCTAGAAATTGGTATACCATATAGACCAGACCGGGAGCTAACTTATACGGAAGAGTCAAATGGCCAGGATTCCATGCAATAG
Protein sequenceShow/hide protein sequence
DCRIYARLLNNIVKVTAQSEESIQLQLSGFSFQDCTVIFMESFLNSVLNLTGWSEWSNSSSLKLLFYSEYVNRGLGANLSGGVKWPGVKWPGFHAIENRKKAIQFTVRQF
INGTTWLLEIGIPYRPDRELTYTEESNGQDSMQ