; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg07767 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07767
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3
Genome locationCarg_Chr07:1082739..1084065
RNA-Seq ExpressionCarg07767
SyntenyCarg07767
Gene Ontology termsNA
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594588.1 Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]1.5e-4398.98Show/hide
Query:  MSSAAAMAARSALGSIVARTTISGRLTSGAKLKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGWTPED
        MSSAAAMAARSALGSIVARTTISGRLTSGAKLKSLRSPFGIPK KQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGWTPED
Subjt:  MSSAAAMAARSALGSIVARTTISGRLTSGAKLKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGWTPED

KAG7026558.1 Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-44100Show/hide
Query:  MSSAAAMAARSALGSIVARTTISGRLTSGAKLKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGWTPEDS
        MSSAAAMAARSALGSIVARTTISGRLTSGAKLKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGWTPEDS
Subjt:  MSSAAAMAARSALGSIVARTTISGRLTSGAKLKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGWTPEDS

XP_023003343.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita maxima]3.8e-4295.92Show/hide
Query:  MSSAAAMAARSALGSIVARTTISGRLTSGAKLKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGWTPED
        MSSAAAM ARSALGSIVARTTISGRLTSGAKLKSLRSPFGIPK KQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTS+LC SCRSYGWTPED
Subjt:  MSSAAAMAARSALGSIVARTTISGRLTSGAKLKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGWTPED

XP_023003344.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucurbita maxima]8.4e-4294.95Show/hide
Query:  MSSAAAMAARSALGSIVARTTISGRLTSGAKLKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGWTPEDS
        MSSAAAM ARSALGSIVARTTISGRLTSGAKLKSLRSPFGIPK KQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTS+LC SCRSYGWTPE S
Subjt:  MSSAAAMAARSALGSIVARTTISGRLTSGAKLKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGWTPEDS

XP_023003345.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 [Cucurbita maxima]1.3e-4295.96Show/hide
Query:  MSSAAAMAARSALGSIVARTTISGRLTSGAKLKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGWTPEDS
        MSSAAAM ARSALGSIVARTTISGRLTSGAKLKSLRSPFGIPK KQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTS+LC SCRSYGWTPEDS
Subjt:  MSSAAAMAARSALGSIVARTTISGRLTSGAKLKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGWTPEDS

TrEMBL top hitse value%identityAlignment
A0A6J1CKI3 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X22.3e-2978.57Show/hide
Query:  MSSAAAMAARSALGSIVARTTISGRLTSGAKLKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGWTPED
        MS+AAAMAARSAL S VAR  ISGRLT GAK+KS RSPFG+P  KQ+PLSQSH I R PVE+SCCVESLLPYHSATASAL TS+L  S RSYGWTPED
Subjt:  MSSAAAMAARSALGSIVARTTISGRLTSGAKLKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGWTPED

A0A6J1CMC1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X37.9e-3078.79Show/hide
Query:  MSSAAAMAARSALGSIVARTTISGRLTSGAKLKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGWTPEDS
        MS+AAAMAARSAL S VAR  ISGRLT GAK+KS RSPFG+P  KQ+PLSQSH I R PVE+SCCVESLLPYHSATASAL TS+L  S RSYGWTPEDS
Subjt:  MSSAAAMAARSALGSIVARTTISGRLTSGAKLKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGWTPEDS

A0A6J1KRI2 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X36.3e-4395.96Show/hide
Query:  MSSAAAMAARSALGSIVARTTISGRLTSGAKLKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGWTPEDS
        MSSAAAM ARSALGSIVARTTISGRLTSGAKLKSLRSPFGIPK KQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTS+LC SCRSYGWTPEDS
Subjt:  MSSAAAMAARSALGSIVARTTISGRLTSGAKLKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGWTPEDS

A0A6J1KT22 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X24.1e-4294.95Show/hide
Query:  MSSAAAMAARSALGSIVARTTISGRLTSGAKLKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGWTPEDS
        MSSAAAM ARSALGSIVARTTISGRLTSGAKLKSLRSPFGIPK KQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTS+LC SCRSYGWTPE S
Subjt:  MSSAAAMAARSALGSIVARTTISGRLTSGAKLKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGWTPEDS

A0A6J1KW85 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X11.8e-4295.92Show/hide
Query:  MSSAAAMAARSALGSIVARTTISGRLTSGAKLKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGWTPED
        MSSAAAM ARSALGSIVARTTISGRLTSGAKLKSLRSPFGIPK KQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTS+LC SCRSYGWTPED
Subjt:  MSSAAAMAARSALGSIVARTTISGRLTSGAKLKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGWTPED

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial5.3e-0746.32Show/hide
Query:  SSAAAMAARSALGSIVARTTI--SGRLTSGAKLKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGW
        +SA    ARS L +  +R+    +GR  S AK      P     +++SPL       R PVE+S CVESLLPYHSATASAL TS L  S ++YGW
Subjt:  SSAAAMAARSALGSIVARTTI--SGRLTSGAKLKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGW

Arabidopsis top hitse value%identityAlignment
AT1G28395.2 unknown protein1.5e-0948.89Show/hide
Query:  AARSALGSIVARTTISG-RLTSGAK--LKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGW
        AARS   S  +R + +  R ++G K    S R+ F +P  KQSPL+    I R PVE+SCCVE++LPYH+ATASAL  S+L  S R  GW
Subjt:  AARSALGSIVARTTISG-RLTSGAK--LKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGW

AT1G28395.4 unknown protein3.1e-1047.87Show/hide
Query:  AARSALGSIVARTTISG-RLTSGAK--LKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGWTPED
        AARS   S  +R + +  R ++G K    S R+ F +P  KQSPL+    I R PVE+SCCVE++LPYH+ATASAL  S+L  S R  GW  +D
Subjt:  AARSALGSIVARTTISG-RLTSGAK--LKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGWTPED

AT1G28395.5 unknown protein3.1e-1047.87Show/hide
Query:  AARSALGSIVARTTISG-RLTSGAK--LKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGWTPED
        AARS   S  +R + +  R ++G K    S R+ F +P  KQSPL+    I R PVE+SCCVE++LPYH+ATASAL  S+L  S R  GW  +D
Subjt:  AARSALGSIVARTTISG-RLTSGAK--LKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGWTPED

AT2G33847.1 unknown protein1.5e-1251.65Show/hide
Query:  AARSALGSIVARTTISGRLTSGAKLKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGWTPED
        AARS   S V R  ++   ++     S RS F +P  KQSPL  SH I R PVE+SCCVE++LPYH+ATASAL  S+L  S RS  WT +D
Subjt:  AARSALGSIVARTTISGRLTSGAKLKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGWTPED

AT2G33847.2 unknown protein7.4e-1252.27Show/hide
Query:  AARSALGSIVARTTISGRLTSGAKLKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGWT
        AARS   S V R  ++   ++     S RS F +P  KQSPL  SH I R PVE+SCCVE++LPYH+ATASAL  S+L  S RS  WT
Subjt:  AARSALGSIVARTTISGRLTSGAKLKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGWT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTCCGCCGCTGCCATGGCTGCTAGGTCAGCCCTCGGATCTATCGTAGCCCGAACCACCATCTCCGGCAGACTTACCAGCGGTGCCAAATTGAAATCACTACGATC
TCCGTTTGGCATCCCCAAGAGCAAGCAGAGCCCACTCTCCCAATCCCATTGCATTTCGAGGTTTCCTGTTGAGGTAAGTTGCTGTGTGGAATCGTTGCTTCCTTACCACT
CTGCTACTGCCTCTGCATTGTTTACGTCTTTGCTTTGCACCTCTTGTAGGAGCTACGGTTGGACCCCTGAAGATTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCTCCGCCGCTGCCATGGCTGCTAGGTCAGCCCTCGGATCTATCGTAGCCCGAACCACCATCTCCGGCAGACTTACCAGCGGTGCCAAATTGAAATCACTACGATC
TCCGTTTGGCATCCCCAAGAGCAAGCAGAGCCCACTCTCCCAATCCCATTGCATTTCGAGGTTTCCTGTTGAGGTAAGTTGCTGTGTGGAATCGTTGCTTCCTTACCACT
CTGCTACTGCCTCTGCATTGTTTACGTCTTTGCTTTGCACCTCTTGTAGGAGCTACGGTTGGACCCCTGAAGATTCTTGA
Protein sequenceShow/hide protein sequence
MSSAAAMAARSALGSIVARTTISGRLTSGAKLKSLRSPFGIPKSKQSPLSQSHCISRFPVEVSCCVESLLPYHSATASALFTSLLCTSCRSYGWTPEDS