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Carg07833 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07833
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPatatin
Genome locationCarg_Chr07:1387530..1387898
RNA-Seq ExpressionCarg07833
SyntenyCarg07833
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594656.1 hypothetical protein SDJN03_11209, partial [Cucurbita argyrosperma subsp. sororia]6.9e-6299.18Show/hide
Query:  MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASRRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSN
        MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASRRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSN
Subjt:  MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASRRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSN

Query:  RFNGIPGFGYRILKDDVTHFPI
        RFNGIPGFGYRILK+DVTHFPI
Subjt:  RFNGIPGFGYRILKDDVTHFPI

XP_022926407.1 uncharacterized protein LOC111433571 [Cucurbita moschata]1.8e-62100Show/hide
Query:  MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASRRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSN
        MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASRRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSN
Subjt:  MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASRRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSN

Query:  RFNGIPGFGYRILKDDVTHFPI
        RFNGIPGFGYRILKDDVTHFPI
Subjt:  RFNGIPGFGYRILKDDVTHFPI

XP_023003961.1 uncharacterized protein LOC111497407 [Cucurbita maxima]5.3e-6298.36Show/hide
Query:  MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASRRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSN
        MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASRRSDS+TSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSN
Subjt:  MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASRRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSN

Query:  RFNGIPGFGYRILKDDVTHFPI
        RFNGIPGFGYRILKDD+THFPI
Subjt:  RFNGIPGFGYRILKDDVTHFPI

XP_023518155.1 uncharacterized protein LOC111781699 [Cucurbita pepo subsp. pepo]6.9e-6299.18Show/hide
Query:  MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASRRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSN
        MYEGISRSSSF EEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASRRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSN
Subjt:  MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASRRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSN

Query:  RFNGIPGFGYRILKDDVTHFPI
        RFNGIPGFGYRILKDDVTHFPI
Subjt:  RFNGIPGFGYRILKDDVTHFPI

XP_038882225.1 uncharacterized protein LOC120073447 [Benincasa hispida]3.2e-5185.25Show/hide
Query:  MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASRRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSN
        MY+G+SRS SFSE+MG VAPLAIGTRGT+GSLVMKEIEYFTKLELERHGGS  +SGDA RRSDSK SFWLLSL+WKWKKR+ NNGILPNICSAVE SKSN
Subjt:  MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASRRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSN

Query:  RFNGIPGFGYRILKDDVTHFPI
        RFNGIPGFGYRILKDD   FPI
Subjt:  RFNGIPGFGYRILKDDVTHFPI

TrEMBL top hitse value%identityAlignment
A0A5D3CRM5 Uncharacterized protein5.2e-4781.3Show/hide
Query:  MYEGISRSSSFSEEM-GAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASRRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKS
        MY+G+SRS SFSE+M GAVAPLAIGTRGT+GSLVMKEIEYFT LELERHG S  + G+A RRSDSK SFWLLSL+WKWKKR+ NNGILPNI SAVE SKS
Subjt:  MYEGISRSSSFSEEM-GAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASRRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKS

Query:  NRFNGIPGFGYRILKDDVTHFPI
        NRFNGIPGFGYRILKDD   FPI
Subjt:  NRFNGIPGFGYRILKDDVTHFPI

A0A6J1CKN5 uncharacterized protein LOC1110124771.7e-5082.26Show/hide
Query:  MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASRRSDSKTSFWLLSLSWKWKKRR--TNNGILPNICSAVELSK
        MY+GIS S SFSE+MG+VAPLAIGTRGT+GSLVMKEIEYFTKLELERHGGSQR++ +ASRR DSK SFWLLS +WKWKKRR  + NGILPNICSAVELSK
Subjt:  MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASRRSDSKTSFWLLSLSWKWKKRR--TNNGILPNICSAVELSK

Query:  SNRFNGIPGFGYRILKDDVTHFPI
        SNRFNGIPGFGYRILK+DV +F I
Subjt:  SNRFNGIPGFGYRILKDDVTHFPI

A0A6J1EEE9 uncharacterized protein LOC1114335718.8e-63100Show/hide
Query:  MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASRRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSN
        MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASRRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSN
Subjt:  MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASRRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSN

Query:  RFNGIPGFGYRILKDDVTHFPI
        RFNGIPGFGYRILKDDVTHFPI
Subjt:  RFNGIPGFGYRILKDDVTHFPI

A0A6J1IJL8 uncharacterized protein LOC1114776867.2e-4981.15Show/hide
Query:  MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASRRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSN
        MY+G+SRS SFSE+M  +APLAIGTRGT+GSLVMKEIEYFTK E+ERHG SQR+SGDASRRSD K SFWL+SL+WKWKKR+ NNGILPNICSAVELSKSN
Subjt:  MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASRRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSN

Query:  RFNGIPGFGYRILKDDVTHFPI
        RFNGIPGF YRILK D   FPI
Subjt:  RFNGIPGFGYRILKDDVTHFPI

A0A6J1KQQ8 uncharacterized protein LOC1114974072.6e-6298.36Show/hide
Query:  MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASRRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSN
        MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASRRSDS+TSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSN
Subjt:  MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASRRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSN

Query:  RFNGIPGFGYRILKDDVTHFPI
        RFNGIPGFGYRILKDD+THFPI
Subjt:  RFNGIPGFGYRILKDDVTHFPI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21780.1 unknown protein9.4e-1744.95Show/hide
Query:  APLAIGTRGTMGSLVMKEIEYFTKLEL------ERHGGSQRLSGDASR--RSDSKTSFWLLSLSWKWKKRRTNNG---ILPNICSAVELSKSNRFNGIPG
        AP+AIGTRGT+GSLV KEI+YF            R G S+       +  RS S+   W     W+ KKR+T  G     P++CSAVE+S  NR   +PG
Subjt:  APLAIGTRGTMGSLVMKEIEYFTKLEL------ERHGGSQRLSGDASR--RSDSKTSFWLLSLSWKWKKRRTNNG---ILPNICSAVELSKSNRFNGIPG

Query:  FGYRILKDD
        F YRILK D
Subjt:  FGYRILKDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGAAGGCATCAGCAGAAGCAGTAGCTTCTCTGAGGAAATGGGTGCTGTTGCTCCACTTGCAATCGGCACGCGAGGCACTATGGGGTCGCTGGTTATGAAGGAGAT
TGAGTACTTCACCAAGCTAGAGCTCGAACGCCATGGCGGCTCTCAGCGGTTAAGTGGAGATGCTTCCAGGAGAAGCGATTCGAAGACAAGCTTTTGGCTTTTGTCGTTGA
GTTGGAAGTGGAAGAAGAGAAGAACCAACAATGGGATTCTCCCCAACATTTGCTCTGCTGTCGAATTGTCAAAAAGCAATCGGTTTAATGGGATTCCTGGTTTTGGTTAC
AGGATTCTCAAAGACGATGTCACCCACTTTCCCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATGAAGGCATCAGCAGAAGCAGTAGCTTCTCTGAGGAAATGGGTGCTGTTGCTCCACTTGCAATCGGCACGCGAGGCACTATGGGGTCGCTGGTTATGAAGGAGAT
TGAGTACTTCACCAAGCTAGAGCTCGAACGCCATGGCGGCTCTCAGCGGTTAAGTGGAGATGCTTCCAGGAGAAGCGATTCGAAGACAAGCTTTTGGCTTTTGTCGTTGA
GTTGGAAGTGGAAGAAGAGAAGAACCAACAATGGGATTCTCCCCAACATTTGCTCTGCTGTCGAATTGTCAAAAAGCAATCGGTTTAATGGGATTCCTGGTTTTGGTTAC
AGGATTCTCAAAGACGATGTCACCCACTTTCCCATTTGA
Protein sequenceShow/hide protein sequence
MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASRRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSNRFNGIPGFGY
RILKDDVTHFPI