CuGenDBv2

Gene ID	Carg07834
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Derlin
Genome location	Carg_Chr07:1388326..1391536
RNA-Seq Expression	Carg07834
Synteny	Carg07834
Gene Ontology terms	GO:0030433 - ubiquitin-dependent ERAD pathway (biological process) GO:0030968 - endoplasmic reticulum unfolded protein response (biological process) GO:0000839 - Hrd1p ubiquitin ligase ERAD-L complex (cellular component) GO:0030176 - integral component of endoplasmic reticulum membrane (cellular component) GO:0051787 - misfolded protein binding (molecular function) GO:1990381 - ubiquitin-specific protease binding (molecular function)
InterPro domains	IPR007599 - Derlin IPR035952 - Rhomboid-like superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7026624.1 Derlin-2.2, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.4e-94

100

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Query:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGIYIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVL
        MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGIYIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVL
Subjt:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGIYIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVL

Query:  LGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPAAEDIHQD
        LGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPAAEDIHQD
Subjt:  LGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPAAEDIHQD

XP_008439977.1 PREDICTED: derlin-2.2 [Cucumis melo]

2.1e-80

68.85

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Query:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------
        MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDII PHHLYLNPILVAKKYQFWRLITNFLFFRKM +                                
Subjt:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------

Query:  ------------------------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP
                                             +VYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP
Subjt:  ------------------------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP

Query:  RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPAAEDIHQD
        RMTGRRPLKTPSFI+ALFA+EAVVVARP DLRFAAPAAEDIHQD
Subjt:  RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPAAEDIHQD

XP_022926636.1 derlin-2.2-like [Cucurbita moschata]

1.3e-82

70.49

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Query:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------
        MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKM +                                
Subjt:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------

Query:  ------------------------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP
                                             +VYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP
Subjt:  ------------------------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP

Query:  RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPAAEDIHQD
        RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPAAEDIHQD
Subjt:  RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPAAEDIHQD

XP_022950204.1 derlin-2.2 [Cucurbita moschata]

2.8e-80

68.85

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Query:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------
        MAQAVEEWYKQMPIITRSYLTAAI TTIGCSLDII PHHLYLNPILVAKKYQFWRLITNFLFFRKM +                                
Subjt:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------

Query:  ------------------------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP
                                             +VYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP
Subjt:  ------------------------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP

Query:  RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPAAEDIHQD
        RMTGRRPLKTPSFIRALFA+EAVVVARPVDLRFAAPA EDIHQD
Subjt:  RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPAAEDIHQD

XP_038882799.1 derlin-2.2 [Benincasa hispida]

2.1e-80

68.85

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Query:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------
        MAQAVEEWYKQMPIITRSYLTAAI TTIGCSLDII PHHLYLNPILVAKKYQFWRLITNFLFFRKM +                                
Subjt:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------

Query:  ------------------------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP
                                             +VYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP
Subjt:  ------------------------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP

Query:  RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPAAEDIHQD
        RMTGRRPLKTPSFI+ALFA+EAVVVARPVDLRFAAPAAEDIHQD
Subjt:  RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPAAEDIHQD

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B028 Derlin

1.0e-80

68.85

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Query:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------
        MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDII PHHLYLNPILVAKKYQFWRLITNFLFFRKM +                                
Subjt:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------

Query:  ------------------------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP
                                             +VYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP
Subjt:  ------------------------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP

Query:  RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPAAEDIHQD
        RMTGRRPLKTPSFI+ALFA+EAVVVARP DLRFAAPAAEDIHQD
Subjt:  RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPAAEDIHQD

A0A5D3CPU8 Derlin

1.0e-80

68.85

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Query:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------
        MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDII PHHLYLNPILVAKKYQFWRLITNFLFFRKM +                                
Subjt:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------

Query:  ------------------------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP
                                             +VYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP
Subjt:  ------------------------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP

Query:  RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPAAEDIHQD
        RMTGRRPLKTPSFI+ALFA+EAVVVARP DLRFAAPAAEDIHQD
Subjt:  RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPAAEDIHQD

A0A6J1EFG3 Derlin

6.5e-83

70.49

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Query:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------
        MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKM +                                
Subjt:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------

Query:  ------------------------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP
                                             +VYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP
Subjt:  ------------------------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP

Query:  RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPAAEDIHQD
        RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPAAEDIHQD
Subjt:  RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPAAEDIHQD

A0A6J1IN59 Derlin

1.3e-80

68.85

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Query:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------
        MAQAVEEWYKQMPIITRSYLTAAI TTIGCSLDII PHHLYLNPILVAKKYQFWRLITNFLFFRKM +                                
Subjt:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------

Query:  ------------------------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP
                                             +VYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP
Subjt:  ------------------------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP

Query:  RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPAAEDIHQD
        RMTGRRPLKTPSFIRALFA+EAVVVARPVDLRFAAPA EDIHQD
Subjt:  RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPAAEDIHQD

A0A6J1KL21 Derlin

6.5e-83

70.49

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Query:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------
        MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKM +                                
Subjt:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------

Query:  ------------------------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP
                                             +VYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP
Subjt:  ------------------------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP

Query:  RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPAAEDIHQD
        RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPAAEDIHQD
Subjt:  RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPAAEDIHQD

SwissProt top hits

e value

%identity

Alignment

Q4G2J3 Derlin-2.2

5.8e-65

55.7

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Query:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------
        MAQAVEEWY+QMPIITRSYLTAA+VTT+GC+L+II P+HLYLNP LV + Y+ WRL+TNFL+FRKM +                                
Subjt:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------

Query:  ------------------------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP
                                             +VYVWSK NPFIHMSFLGLFTFTAAYLPWVLLGFS+LVG+S WVDLLGM+AGH YYFLEDVYP
Subjt:  ------------------------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP

Query:  RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPA
        RMTGRRPLKTPSFI+ALFA++ VVVA+P +    A A
Subjt:  RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPA

Q4G2J4 Derlin-2.1

5.8e-65

55.7

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Query:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------
        MAQAVEEWY+QMPIITRSYLTAA+VTT+GC+L+II P+HLYLNP LV + Y+ WRL+TNFL+FRKM +                                
Subjt:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------

Query:  ------------------------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP
                                             +VYVWSK NPFIHMSFLGLFTFTAAYLPWVLLGFS+LVG+S WVDLLGM+AGH YYFLEDVYP
Subjt:  ------------------------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP

Query:  RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPA
        RMTGRRPLKTPSFI+ALFA++ VVVA+P +    A A
Subjt:  RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPA

Q851X7 Derlin-2

2.0e-65

56.12

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Query:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------
        MAQAVEEWY+QMPIITRSYLTAA+VTT+GC+L+II P+HLYLNP LV + Y+ WRL+TNFL+FRKM +                                
Subjt:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------

Query:  ------------------------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP
                                             +VYVWSK NPFIHMSFLGLFTFTAAYLPWVLLGFS+LVG+S WVDLLGM+AGH YYFLEDVYP
Subjt:  ------------------------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP

Query:  RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPA
        RMTGRRPLKTPSFI+ALFA++ VVVARP +    A A
Subjt:  RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPA

Q8VZ96 Derlin-2.1

1.8e-69

57.38

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Query:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------
        MAQAVEEWYKQMPIITRSYLTAA+VTT+GCSL+II P++LYLNP LV K+YQFWRL+TNFL+FRKM +                                
Subjt:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------

Query:  ------------------------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP
                                             +VYVWSKQNP+IHMSFLGLFTFTAAYLPWVLLGFS+LVGASAW D LGM+AGHAYYFL  VYP
Subjt:  ------------------------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP

Query:  RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPAAEDIHQD
        RMT RRPLKTPSF++ALFA+E VV+ARP D+RFA    ++IHQD
Subjt:  RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPAAEDIHQD

Q9ZS88 Derlin-2.2

2.9e-72

58.61

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Query:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------
        MAQAVEEWYKQMPIITRSYLTAA++TT+GCSLDII P++LYLNP LV K+YQ+WRL+TNFL+FRKM +                                
Subjt:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------

Query:  ------------------------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP
                                             +VYVWSKQNP+IHMSFLGLFTFTAAYLPWVLLGFS+LVGASAWVDLLGM+AGHAYYFL +VYP
Subjt:  ------------------------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP

Query:  RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPAAEDIHQD
        RMT RRPLKTPSF++ALFA+E VVVARP D+RFAA   ++IHQD
Subjt:  RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPAAEDIHQD

Arabidopsis top hits

e value

%identity

Alignment

AT4G04860.1 DERLIN-2.2

2.1e-73

58.61

Show/hide

Query:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------
        MAQAVEEWYKQMPIITRSYLTAA++TT+GCSLDII P++LYLNP LV K+YQ+WRL+TNFL+FRKM +                                
Subjt:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------

Query:  ------------------------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP
                                             +VYVWSKQNP+IHMSFLGLFTFTAAYLPWVLLGFS+LVGASAWVDLLGM+AGHAYYFL +VYP
Subjt:  ------------------------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP

Query:  RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPAAEDIHQD
        RMT RRPLKTPSF++ALFA+E VVVARP D+RFAA   ++IHQD
Subjt:  RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPAAEDIHQD

AT4G21810.1 DERLIN-2.1

1.2e-70

57.38

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Query:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------
        MAQAVEEWYKQMPIITRSYLTAA+VTT+GCSL+II P++LYLNP LV K+YQFWRL+TNFL+FRKM +                                
Subjt:  MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------

Query:  ------------------------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP
                                             +VYVWSKQNP+IHMSFLGLFTFTAAYLPWVLLGFS+LVGASAW D LGM+AGHAYYFL  VYP
Subjt:  ------------------------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYP

Query:  RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPAAEDIHQD
        RMT RRPLKTPSF++ALFA+E VV+ARP D+RFA    ++IHQD
Subjt:  RMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPAAEDIHQD

AT4G29330.1 DERLIN-1

2.4e-21

29.9

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Query:  EWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------------
        E+Y  +P IT++Y T    TT+   L ++ P H+ L P LV K++Q WRLITN  F     I                                      
Subjt:  EWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGI--------------------------------------

Query:  ---------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIR
                              ++Y+WS++ P  ++S  GL T  A YLPW +L   V+ G+    DLLG++AGH YYFL  ++P  TG+  LKTP ++ 
Subjt:  ---------------------YIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIR

Query:  ALFA
         + A
Subjt:  ALFA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTCAAGCAGTTGAAGAATGGTACAAGCAAATGCCTATCATCACCCGCTCCTATCTCACAGCCGCTATAGTAACCACAATCGGCTGTTCCCTCGATATTATCTATCC
GCATCATCTTTACTTGAATCCTATCCTCGTTGCTAAGAAGTATCAGTTCTGGCGCCTCATTACCAACTTCCTGTTCTTCCGCAAAATGGGTATTTATATAGTTTACGTAT
GGAGCAAGCAAAACCCATTCATCCATATGAGCTTTTTAGGCCTCTTTACTTTTACGGCAGCTTACCTGCCATGGGTTCTTTTGGGATTCTCTGTACTTGTCGGGGCTAGT
GCTTGGGTGGATCTTCTGGGCATGGTTGCTGGCCACGCTTATTATTTTCTTGAAGATGTGTACCCACGAATGACAGGCCGACGACCATTAAAAACCCCATCCTTCATCAG
GGCATTATTTGCTGAGGAAGCAGTTGTAGTGGCGCGACCCGTGGATTTGAGATTTGCAGCCCCTGCTGCGGAGGATATTCATCAAGATTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIIYPHHLYLNPILVAKKYQFWRLITNFLFFRKMGIYIVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGAS
AWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFAEEAVVVARPVDLRFAAPAAEDIHQD

Carg07834 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome