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Carg07842 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07842
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAnkyrin repeat family protein
Genome locationCarg_Chr07:1420066..1420302
RNA-Seq ExpressionCarg07842
SyntenyCarg07842
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594665.1 Ankyrin repeat domain-containing protein 13C, partial [Cucurbita argyrosperma subsp. sororia]4.3e-3398.72Show/hide
Query:  MAAEAPSWADQWGAGGIGAIEEDDGSKAKGEHISDKKARSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKNSN
        MAAEAPSWADQWGAGGIGAIEEDDGSKAKGEHISDKKARSKPGFAKAK ATVAGAKKIGSGISNGIKWIMNPRKKNSN
Subjt:  MAAEAPSWADQWGAGGIGAIEEDDGSKAKGEHISDKKARSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKNSN

KAG6603780.1 Ankyrin repeat domain-containing protein 13B, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2587.01Show/hide
Query:  MAAEAPSWADQWGAGGIGAIEEDDGSKAKGEHISDKKARSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKNS
        MAAEAPSWADQWGAGGIGA+EEDDGSKAKG   SDKK  SK G AKA AATVAGAKKIGSGISNGIKWIMNPRKK+S
Subjt:  MAAEAPSWADQWGAGGIGAIEEDDGSKAKGEHISDKKARSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKNS

KAG7026631.1 hypothetical protein SDJN02_10634, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-33100Show/hide
Query:  MAAEAPSWADQWGAGGIGAIEEDDGSKAKGEHISDKKARSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKNSN
        MAAEAPSWADQWGAGGIGAIEEDDGSKAKGEHISDKKARSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKNSN
Subjt:  MAAEAPSWADQWGAGGIGAIEEDDGSKAKGEHISDKKARSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKNSN

KGN49108.1 hypothetical protein Csa_002989 [Cucumis sativus]1.3e-2687.01Show/hide
Query:  MAAEAPSWADQWGAGGIGAIEEDDGSKAKGEHISDKKARSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKNS
        MAAEAPSWADQWGAGGIGA+EEDD SKAKG   +DKK  SKPGFAK KAATVAGAKKIGSGISNGIKWIMNPRKK+S
Subjt:  MAAEAPSWADQWGAGGIGAIEEDDGSKAKGEHISDKKARSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKNS

TYK13043.1 Ankyrin repeat family protein, putative isoform 1 [Cucumis melo var. makuwa]8.7e-2687.01Show/hide
Query:  MAAEAPSWADQWGAGGIGAIEEDDGSKAKGEHISDKKARSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKNS
        MAAEAPSWADQWGAGGIGA+EEDD SKAKG   +DKK+ SKPGFAKAKAAT+AGAKKIGSGISNGIKWIMNPRKK+S
Subjt:  MAAEAPSWADQWGAGGIGAIEEDDGSKAKGEHISDKKARSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKNS

TrEMBL top hitse value%identityAlignment
A0A0A0KHT9 Uncharacterized protein6.5e-2787.01Show/hide
Query:  MAAEAPSWADQWGAGGIGAIEEDDGSKAKGEHISDKKARSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKNS
        MAAEAPSWADQWGAGGIGA+EEDD SKAKG   +DKK  SKPGFAK KAATVAGAKKIGSGISNGIKWIMNPRKK+S
Subjt:  MAAEAPSWADQWGAGGIGAIEEDDGSKAKGEHISDKKARSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKNS

A0A2P5EAN9 Uncharacterized protein (Fragment)3.0e-1664.56Show/hide
Query:  MAAEAPSWADQWGAGGIGAIEEDDGSKAKGEHISDKKARSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNP-RKKNSN
        MA+E PSWADQWGAGGIGA+EEDD + AK E  ++KK   K G  KAKAA +AGA+KI SG SNGIKWI N  +KKN++
Subjt:  MAAEAPSWADQWGAGGIGAIEEDDGSKAKGEHISDKKARSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNP-RKKNSN

A0A5D3CM93 Ankyrin repeat family protein, putative isoform 14.2e-2687.01Show/hide
Query:  MAAEAPSWADQWGAGGIGAIEEDDGSKAKGEHISDKKARSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKNS
        MAAEAPSWADQWGAGGIGA+EEDD SKAKG   +DKK+ SKPGFAKAKAAT+AGAKKIGSGISNGIKWIMNPRKK+S
Subjt:  MAAEAPSWADQWGAGGIGAIEEDDGSKAKGEHISDKKARSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKNS

A0A5N6QB49 Uncharacterized protein3.3e-1561.54Show/hide
Query:  MAAEAPSWADQWGAGGIGAIEEDDGSKAKGEHISDKKARSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNP-RKKNS
        MAAEAPSWADQWGAGGIGA+EE++ + AK +   +KK  +K GF KAKA  + GA+KI SG S GIKW+ N  +KKNS
Subjt:  MAAEAPSWADQWGAGGIGAIEEDDGSKAKGEHISDKKARSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNP-RKKNS

W9RHJ5 Uncharacterized protein4.4e-1562.67Show/hide
Query:  MAAEAPSWADQWGAGGIGAIEEDDGSKAKGEHISDKKARSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKK
        MA+EAPSWADQWGAGGIGA+EE+D + +K +  ++KK   K G  KAKAA +AGA+KI SG SNGIKWI N  +K
Subjt:  MAAEAPSWADQWGAGGIGAIEEDDGSKAKGEHISDKKARSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G11740.1 ankyrin repeat family protein3.7e-0637.66Show/hide
Query:  MAAEAPSWADQWGAGGIGAIEEDDGSKAKGEHISDKKARSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKNS
        MA+EAPSWADQWG GGIG +  ++ +  K +    K  ++K G  KAK     G         N +K ++  +KK+S
Subjt:  MAAEAPSWADQWGAGGIGAIEEDDGSKAKGEHISDKKARSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKNS

AT1G62045.1 BEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:AT1G11740.1)1.1e-0568.97Show/hide
Query:  MAAEAPSWADQWGAGGIGAIEEDDGSKAK
        MA+EAPSWADQWG GGIG + E+D +K+K
Subjt:  MAAEAPSWADQWGAGGIGAIEEDDGSKAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCAGAAGCACCAAGCTGGGCCGACCAATGGGGAGCCGGAGGGATTGGAGCCATAGAAGAAGACGATGGTAGTAAAGCCAAAGGAGAACACATCTCCGACAAGAA
GGCTAGGTCTAAGCCTGGATTTGCGAAGGCCAAGGCCGCGACCGTGGCTGGTGCCAAAAAGATTGGAAGTGGGATATCTAATGGCATCAAGTGGATCATGAACCCACGCA
AGAAAAACTCCAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCAGAAGCACCAAGCTGGGCCGACCAATGGGGAGCCGGAGGGATTGGAGCCATAGAAGAAGACGATGGTAGTAAAGCCAAAGGAGAACACATCTCCGACAAGAA
GGCTAGGTCTAAGCCTGGATTTGCGAAGGCCAAGGCCGCGACCGTGGCTGGTGCCAAAAAGATTGGAAGTGGGATATCTAATGGCATCAAGTGGATCATGAACCCACGCA
AGAAAAACTCCAATTAA
Protein sequenceShow/hide protein sequence
MAAEAPSWADQWGAGGIGAIEEDDGSKAKGEHISDKKARSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKNSN