; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg07846 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07846
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionU3 small nucleolar RNA-associated protein 6 homolog
Genome locationCarg_Chr07:1433494..1434831
RNA-Seq ExpressionCarg07846
SyntenyCarg07846
Gene Ontology termsGO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0032040 - small-subunit processome (cellular component)
GO:0034388 - Pwp2p-containing subcomplex of 90S preribosome (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0030515 - snoRNA binding (molecular function)
InterPro domainsIPR003107 - HAT (Half-A-TPR) repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR013949 - U3 small nucleolar RNA-associated protein 6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594669.1 U3 small nucleolar RNA-associated protein 6-like protein, partial [Cucurbita argyrosperma subsp. sororia]2.3e-198100Show/hide
Query:  MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI
        MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI
Subjt:  MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI

Query:  LYIYRLAVSRYKGDIDLWFRYLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
        LYIYRLAVSRYKGDIDLWFRYLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
Subjt:  LYIYRLAVSRYKGDIDLWFRYLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL

Query:  KARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGEDREDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
        KARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGEDREDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
Subjt:  KARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGEDREDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH

Query:  SEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQV
        SEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQV
Subjt:  SEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQV

KAG7026635.1 UTP6 [Cucurbita argyrosperma subsp. argyrosperma]2.3e-198100Show/hide
Query:  MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI
        MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI
Subjt:  MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI

Query:  LYIYRLAVSRYKGDIDLWFRYLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
        LYIYRLAVSRYKGDIDLWFRYLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
Subjt:  LYIYRLAVSRYKGDIDLWFRYLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL

Query:  KARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGEDREDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
        KARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGEDREDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
Subjt:  KARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGEDREDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH

Query:  SEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQV
        SEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQV
Subjt:  SEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQV

XP_022926883.1 U3 small nucleolar RNA-associated protein 6 homolog [Cucurbita moschata]3.0e-19899.72Show/hide
Query:  MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI
        MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI
Subjt:  MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI

Query:  LYIYRLAVSRYKGDIDLWFRYLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
        LYIYRLAVSRYKGDIDLWFRYLEFCRAQKNGRMKKVLAQLIRFHPKVPGVW+YAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
Subjt:  LYIYRLAVSRYKGDIDLWFRYLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL

Query:  KARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGEDREDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
        KARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGEDREDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
Subjt:  KARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGEDREDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH

Query:  SEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQV
        SEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQV
Subjt:  SEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQV

XP_023003045.1 U3 small nucleolar RNA-associated protein 6 homolog [Cucurbita maxima]5.6e-19799.15Show/hide
Query:  MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI
        MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI
Subjt:  MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI

Query:  LYIYRLAVSRYKGDIDLWFRYLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
        LYIYRLAVSRYKGDIDLWFRYLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
Subjt:  LYIYRLAVSRYKGDIDLWFRYLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL

Query:  KARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGEDREDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
        KARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGEDREDNDGSVGETESKNKLDLFRE+GSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
Subjt:  KARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGEDREDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH

Query:  SEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQV
        SEELHSKILQDIKRDFGTEPQYWDWLARL+YNPDDVQGMSDKK+NSRIEKAVQV
Subjt:  SEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQV

XP_023517938.1 U3 small nucleolar RNA-associated protein 6 homolog [Cucurbita pepo subsp. pepo]6.6e-19899.72Show/hide
Query:  MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI
        MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKS SDFACVKRI
Subjt:  MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI

Query:  LYIYRLAVSRYKGDIDLWFRYLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
        LYIYRLAVSRYKGDIDLWFRYLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
Subjt:  LYIYRLAVSRYKGDIDLWFRYLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL

Query:  KARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGEDREDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
        KARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGEDREDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
Subjt:  KARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGEDREDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH

Query:  SEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQV
        SEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQV
Subjt:  SEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQV

TrEMBL top hitse value%identityAlignment
A0A1S3B0R2 U3 small nucleolar RNA-associated protein 6 homolog7.2e-17488.42Show/hide
Query:  MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI
        MADVVQFRLEGM+DELDDLE+RGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDY+ YIDYE  LDSLR LR+KAV+RELKKQGNKKMR S+SDFA VKRI
Subjt:  MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI

Query:  LYIYRLAVSRYKGDIDLWFRYLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
        LYIYRLAVSRYKGDIDLWFRYLEFCRA+KNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDH+ NVDAARSLMLSGLRVCPTSEDLW+EYLRMELTYLNKL
Subjt:  LYIYRLAVSRYKGDIDLWFRYLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL

Query:  KARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGEDREDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
        KARKVALGEDEGSLVREN  A +KQWREENKDLFMS+GE R D+DGS  ET SKNKLDLFRE+GSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
Subjt:  KARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGEDREDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH

Query:  SEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQV
        SEE+ SKILQDIKRDF ++PQYWDWLARL+YNP++VQG SD KE SRIE+AV+V
Subjt:  SEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQV

A0A5D3CNA4 U3 small nucleolar RNA-associated protein 6-like protein7.2e-17488.42Show/hide
Query:  MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI
        MADVVQFRLEGM+DELDDLE+RGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDY+ YIDYE  LDSLR LR+KAV+RELKKQGNKKMR S+SDFA VKRI
Subjt:  MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI

Query:  LYIYRLAVSRYKGDIDLWFRYLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
        LYIYRLAVSRYKGDIDLWFRYLEFCRA+KNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDH+ NVDAARSLMLSGLRVCPTSEDLW+EYLRMELTYLNKL
Subjt:  LYIYRLAVSRYKGDIDLWFRYLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL

Query:  KARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGEDREDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
        KARKVALGEDEGSLVREN  A +KQWREENKDLFMS+GE R D+DGS  ET SKNKLDLFRE+GSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
Subjt:  KARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGEDREDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH

Query:  SEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQV
        SEE+ SKILQDIKRDF ++PQYWDWLARL+YNP++VQG SD KE SRIE+AV+V
Subjt:  SEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQV

A0A6J1CMJ8 U3 small nucleolar RNA-associated protein 6 homolog2.9e-18391.53Show/hide
Query:  MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI
        MADVVQFRLEGM+DELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDY+AY+DYETHLDSLR LRKKAV+RELKKQGNKKMRKS+SDFA VKRI
Subjt:  MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI

Query:  LYIYRLAVSRYKGDIDLWFRYLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
        LYIYRLAV+RYKGDIDLWFRYLEFCR Q+NGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDH+TNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
Subjt:  LYIYRLAVSRYKGDIDLWFRYLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL

Query:  KARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGEDREDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
        KARKVALGED+GSLVREN+AAE+KQWREENKDLFMSIGE+RE+NDGSV ETESK++LDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDL+H
Subjt:  KARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGEDREDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH

Query:  SEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQV
        SEE+HSKILQD+KRDFGT+PQYWDWLARL+ NP++VQGMSD KE S+IEKAVQV
Subjt:  SEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQV

A0A6J1EJG1 U3 small nucleolar RNA-associated protein 6 homolog1.4e-19899.72Show/hide
Query:  MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI
        MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI
Subjt:  MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI

Query:  LYIYRLAVSRYKGDIDLWFRYLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
        LYIYRLAVSRYKGDIDLWFRYLEFCRAQKNGRMKKVLAQLIRFHPKVPGVW+YAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
Subjt:  LYIYRLAVSRYKGDIDLWFRYLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL

Query:  KARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGEDREDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
        KARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGEDREDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
Subjt:  KARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGEDREDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH

Query:  SEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQV
        SEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQV
Subjt:  SEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQV

A0A6J1KQP1 U3 small nucleolar RNA-associated protein 6 homolog2.7e-19799.15Show/hide
Query:  MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI
        MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI
Subjt:  MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI

Query:  LYIYRLAVSRYKGDIDLWFRYLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
        LYIYRLAVSRYKGDIDLWFRYLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
Subjt:  LYIYRLAVSRYKGDIDLWFRYLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL

Query:  KARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGEDREDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
        KARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGEDREDNDGSVGETESKNKLDLFRE+GSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
Subjt:  KARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGEDREDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH

Query:  SEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQV
        SEELHSKILQDIKRDFGTEPQYWDWLARL+YNPDDVQGMSDKK+NSRIEKAVQV
Subjt:  SEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQV

SwissProt top hitse value%identityAlignment
O60188 U3 small nucleolar RNA-associated protein 62.0e-2733.65Show/hide
Query:  MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI
        MA+ VQ+ +E  + EL+DL ++ +F+R EI  I+K RR FE +L R      D+++YI YE +L++LR  R K +        N   + ++SD+A  +++
Subjt:  MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI

Query:  LYIYRLAVSRYKGDIDLWFRYLEFCRAQKN-GRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNK
        L+++  A +++ GD+ LW  Y+ + +  K    + K+    ++ HP    +W+ A   EF  + NV AAR+LM   LR+   +  +W  Y R+EL+Y+ K
Subjt:  LYIYRLAVSRYKGDIDLWFRYLEFCRAQKN-GRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNK

Query:  LKARKVAL
        L AR   L
Subjt:  LKARKVAL

Q02354 U3 small nucleolar RNA-associated protein 65.7e-2729.8Show/hide
Query:  QFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRILYIYR
        ++ LE  + E+DDL ++GLF++ E++ I+K+R  FE+RL        DY+ YI+YE++++ LR  R K + +        K   S+SD++  +RI +IY+
Subjt:  QFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRILYIYR

Query:  LAVSRYKGDIDLWFRYLEFCRAQKN----GRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKLK
           +++  D+  W  YL + +A+ N     ++  +  QL++ HP    +WI  A +E++   N  + R++  +GLR  P    LW EY++ EL ++ KL 
Subjt:  LAVSRYKGDIDLWFRYLEFCRAQKN----GRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKLK

Query:  ARKVALG---EDEGSLVRENKAAEDKQWREENKDLFM-SIGEDREDNDGSVGETE
         R+  +G   E E  L  +N+   ++   EE   L + S G+  +D    + E +
Subjt:  ARKVALG---EDEGSLVRENKAAEDKQWREENKDLFM-SIGEDREDNDGSVGETE

Q54WN5 U3 small nucleolar RNA-associated protein 6 homolog2.0e-1624.17Show/hide
Query:  DVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRILY
        D V F ++ +L+E   L   G+ S++E  +I+K+R   E ++      K D++ YI YE  LD L   R KA + E   +    +R ++           
Subjt:  DVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRILY

Query:  IYRLAVSRYKGDIDLWFRYL--EFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
        ++  A  ++  D  LW   L     RA K G  +     L    P+   +W  AA +EF+ + N+  AR+L+ +G++   T + LW  +  MELTY++ L
Subjt:  IYRLAVSRYKGDIDLWFRYL--EFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL

Query:  KAR----KVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGEDREDNDGSVGETESKNKLDLFREQGSNILETIYNGAIE-ALPSSFSLRKRVLEIL-E
         +        + E+E   ++ N  +  K  + E KD F++ G++       +   +   +  L R Q   I + ++  AI+ ++   F  RK   +I  +
Subjt:  KAR----KVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGEDREDNDGSVGETESKNKLDLFREQGSNILETIYNGAIE-ALPSSFSLRKRVLEIL-E

Query:  AMDLAHSEE--------LHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENS
         +D+    E        L  +IL+ +  DF  + + + +LA ++ +      +  +  NS
Subjt:  AMDLAHSEE--------LHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENS

Q8VCY6 U3 small nucleolar RNA-associated protein 6 homolog2.3e-2832.68Show/hide
Query:  MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI
        MA+++Q R+E  + EL+ LE+ GLFS  EI  I+K+    EY++ R   LK+D++ Y+ YE +L  L + R+  +    K        K   +++ V R+
Subjt:  MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI

Query:  LYIYRLAVSRYKGDIDLWFRYLEFCRA-QKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNK
          ++  A +++K D+ LW  Y+ FC+       + K+ + ++  H   P +WI AA WE +   + ++AR L L  LR  P    L+ EY RMEL +  K
Subjt:  LYIYRLAVSRYKGDIDLWFRYLEFCRA-QKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNK

Query:  LKARK
        L+  K
Subjt:  LKARK

Q9NYH9 U3 small nucleolar RNA-associated protein 6 homolog2.7e-2927.04Show/hide
Query:  MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI
        MA+++Q R+E  L EL+ LE+ GLFS  EI  I+K+    EY+++R    K+D++ Y+ YE +L  L + R+  +    KK    ++  S+     V R+
Subjt:  MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI

Query:  LYIYRLAVSRYKGDIDLWFRYLEFCRA-QKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNK
          +++ A +++K D+ LW  Y+ FC+      R+ KV + ++  H   P +WI AA WE +   + ++AR L L  LR  P    L+ EY RMEL +  K
Subjt:  LYIYRLAVSRYKGDIDLWFRYLEFCRA-QKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNK

Query:  LKARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGEDREDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLA
        L+                           + K+ F     D E+ D S  E   K +L             IY  ++  +  +      +L I +  D A
Subjt:  LKARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGEDREDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLA

Query:  HSEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQV
          ++L  +I  D++     +P  WD++AR +    +++  ++++  ++  KAV+V
Subjt:  HSEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQV

Arabidopsis top hitse value%identityAlignment
AT4G03430.1 pre-mRNA splicing factor-related7.0e-0436.07Show/hide
Query:  RMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRM
        R + +   L + +PK P  WI AA  E + D  + AAR  +  G   CP +ED+W+E  R+
Subjt:  RMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRM

AT4G28200.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), U3 small nucleolar RNA-associated protein 6 (InterPro:IPR013949); Has 492 Blast hits to 480 proteins in 206 species: Archae - 0; Bacteria - 2; Metazoa - 128; Fungi - 191; Plants - 60; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink).2.0e-12864.82Show/hide
Query:  MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI
        MADVVQ+RLE M+DELDDLE+R +F+R EIAEIVKQRRKFEYRLKRP PLK+D++AYIDYE  LD LR+LR+K+V+R  K    K+ +KSVSDFA V RI
Subjt:  MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRI

Query:  LYIYRLAVSRYKGDIDLWFRYLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
        + IYRLA  RYKGDI+LWFRYLEFC+ +++GRMKK LAQ IRFHPKV GVWIYAA+WEFD + NV AAR+LML+GLRVC  SEDLWVEYLRMELT+LNKL
Subjt:  LYIYRLAVSRYKGDIDLWFRYLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL

Query:  KARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSI----GEDREDND-GSVGE--TESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEIL
        KARKVALGED+GSLVR+ K  ED+QW++ENK+LFMS+    G ++E+ND  S+ E   +   K+D  +E+GSN+L+TIY+GA+EA+PSSF LRKR LEIL
Subjt:  KARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSI----GEDREDND-GSVGE--TESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEIL

Query:  EAMDLAHSEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQV
        EA DLAHS+E+ + IL D+KRDF  EP+YW+WLAR + +         +  N +++KA+QV
Subjt:  EAMDLAHSEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACGTTGTGCAGTTCCGACTCGAGGGCATGCTCGACGAGCTCGATGACCTTGAGCAACGTGGCCTCTTCTCCCGGCGAGAGATTGCCGAGATTGTAAAGCAGCG
GCGCAAGTTTGAGTACCGTCTCAAACGACCTTGTCCGCTTAAGCAGGACTATGTGGCCTATATCGATTACGAGACCCATTTGGACTCGCTTCGGCGTCTCAGGAAGAAGG
CAGTATCTCGTGAGCTGAAGAAGCAGGGAAATAAAAAGATGAGAAAATCTGTCTCCGACTTCGCTTGTGTGAAAAGGATCTTGTACATTTATCGGCTTGCAGTTTCTAGG
TATAAGGGTGATATTGATCTTTGGTTTCGCTATCTCGAGTTTTGTAGAGCACAAAAGAACGGGAGAATGAAGAAGGTTCTCGCTCAGCTGATTAGGTTTCACCCAAAAGT
TCCAGGGGTCTGGATATATGCTGCTGCTTGGGAGTTTGATCATGATACCAATGTGGATGCAGCACGTTCACTTATGTTAAGTGGTCTGAGGGTTTGTCCAACTTCAGAGG
ATCTGTGGGTTGAATATCTACGGATGGAGCTTACTTATCTTAATAAGTTGAAGGCTCGAAAGGTTGCCCTTGGAGAGGACGAGGGAAGTCTAGTCCGTGAAAATAAAGCT
GCCGAGGATAAACAGTGGAGAGAGGAAAATAAAGATTTATTTATGTCAATTGGTGAGGATAGAGAAGATAATGATGGATCAGTCGGTGAAACGGAGTCGAAAAATAAATT
GGATTTGTTTCGAGAGCAGGGTTCAAACATTTTAGAAACTATCTACAATGGTGCAATTGAAGCACTTCCTTCTAGTTTTAGCCTGAGAAAGCGTGTCTTGGAGATACTGG
AAGCAATGGATTTAGCTCATTCAGAAGAATTGCACTCTAAAATATTACAGGATATAAAAAGAGACTTCGGTACAGAACCACAATATTGGGACTGGCTGGCTAGACTTCAG
TATAATCCCGATGATGTACAGGGAATGAGTGATAAAAAGGAAAACTCTCGGATTGAAAAAGCTGTCCAGGTATGA
mRNA sequenceShow/hide mRNA sequence
ATAACCTTTCTGTATCGCCGCCCTAAAGCCGTCTCCGAGAGTGAAGCCCTCCTCCATCGTTTAGCTCCATTACCTCCGAGTCCTCTCGCACCGAGCTCGACCATGGCGGA
CGTTGTGCAGTTCCGACTCGAGGGCATGCTCGACGAGCTCGATGACCTTGAGCAACGTGGCCTCTTCTCCCGGCGAGAGATTGCCGAGATTGTAAAGCAGCGGCGCAAGT
TTGAGTACCGTCTCAAACGACCTTGTCCGCTTAAGCAGGACTATGTGGCCTATATCGATTACGAGACCCATTTGGACTCGCTTCGGCGTCTCAGGAAGAAGGCAGTATCT
CGTGAGCTGAAGAAGCAGGGAAATAAAAAGATGAGAAAATCTGTCTCCGACTTCGCTTGTGTGAAAAGGATCTTGTACATTTATCGGCTTGCAGTTTCTAGGTATAAGGG
TGATATTGATCTTTGGTTTCGCTATCTCGAGTTTTGTAGAGCACAAAAGAACGGGAGAATGAAGAAGGTTCTCGCTCAGCTGATTAGGTTTCACCCAAAAGTTCCAGGGG
TCTGGATATATGCTGCTGCTTGGGAGTTTGATCATGATACCAATGTGGATGCAGCACGTTCACTTATGTTAAGTGGTCTGAGGGTTTGTCCAACTTCAGAGGATCTGTGG
GTTGAATATCTACGGATGGAGCTTACTTATCTTAATAAGTTGAAGGCTCGAAAGGTTGCCCTTGGAGAGGACGAGGGAAGTCTAGTCCGTGAAAATAAAGCTGCCGAGGA
TAAACAGTGGAGAGAGGAAAATAAAGATTTATTTATGTCAATTGGTGAGGATAGAGAAGATAATGATGGATCAGTCGGTGAAACGGAGTCGAAAAATAAATTGGATTTGT
TTCGAGAGCAGGGTTCAAACATTTTAGAAACTATCTACAATGGTGCAATTGAAGCACTTCCTTCTAGTTTTAGCCTGAGAAAGCGTGTCTTGGAGATACTGGAAGCAATG
GATTTAGCTCATTCAGAAGAATTGCACTCTAAAATATTACAGGATATAAAAAGAGACTTCGGTACAGAACCACAATATTGGGACTGGCTGGCTAGACTTCAGTATAATCC
CGATGATGTACAGGGAATGAGTGATAAAAAGGAAAACTCTCGGATTGAAAAAGCTGTCCAGGTATGA
Protein sequenceShow/hide protein sequence
MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDYETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRILYIYRLAVSR
YKGDIDLWFRYLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVRENKA
AEDKQWREENKDLFMSIGEDREDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAHSEELHSKILQDIKRDFGTEPQYWDWLARLQ
YNPDDVQGMSDKKENSRIEKAVQV