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Carg07862 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07862
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTranscription repressor
Genome locationCarg_Chr07:1491449..1492176
RNA-Seq ExpressionCarg07862
SyntenyCarg07862
Gene Ontology termsGO:0045892 - negative regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR006458 - Ovate protein family, C-terminal
IPR038933 - Ovate protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594683.1 hypothetical protein SDJN03_11236, partial [Cucurbita argyrosperma subsp. sororia]2.9e-72100Show/hide
Query:  MNAAGSSQRHRQEQRAYRALCCRCTCHCRLRFSSSEETESFGSERFPSDSSISHAMDQMIREKQRIEETKFVVMVAMEKCSNGIEKPKDLRSLLNCYISM
        MNAAGSSQRHRQEQRAYRALCCRCTCHCRLRFSSSEETESFGSERFPSDSSISHAMDQMIREKQRIEETKFVVMVAMEKCSNGIEKPKDLRSLLNCYISM
Subjt:  MNAAGSSQRHRQEQRAYRALCCRCTCHCRLRFSSSEETESFGSERFPSDSSISHAMDQMIREKQRIEETKFVVMVAMEKCSNGIEKPKDLRSLLNCYISM

Query:  NSDECHGVILEEMCDQIKRVISTTTSIQMLSDYNVKEGMAN
        NSDECHGVILEEMCDQIKRVISTTTSIQMLSDYNVKEGMAN
Subjt:  NSDECHGVILEEMCDQIKRVISTTTSIQMLSDYNVKEGMAN

XP_023003472.1 probable transcription repressor OFP9 [Cucurbita maxima]1.6e-4676.12Show/hide
Query:  MNAAGSSQRHRQEQRAYRALCCRCTCHCRLRFSSSEETESFGSERFPSDSSISHAMDQMIREKQRIEETKFVVMVAMEKCS-----------------NG
        MNAAGSSQRHRQ+QRAYRALCCRCTC+CRL FSSSEETESFGSERFPSDSS SHAMD+MIREKQRIEETKFVVMVAMEKCS                 NG
Subjt:  MNAAGSSQRHRQEQRAYRALCCRCTCHCRLRFSSSEETESFGSERFPSDSSISHAMDQMIREKQRIEETKFVVMVAMEKCS-----------------NG

Query:  IEKPKDLRSLLNCYISMNSDECHGVILEEMCDQI
        IEKPKDLRSLLNCYISMNSDECH  ++ E+  ++
Subjt:  IEKPKDLRSLLNCYISMNSDECHGVILEEMCDQI

XP_023518152.1 probable transcription repressor OFP9 [Cucurbita pepo subsp. pepo]2.7e-4980.6Show/hide
Query:  MNAAGSSQRHRQEQRAYRALCCRCTCHCRLRFSSSEETESFGSERFPSDSSISHAMDQMIREKQRIEETKFVVMVAMEKCS-----------------NG
        MNAAGSSQRHRQEQRAYRALCCRCTC+CRLRFSSS+ETESFGSERFPSDSSISHAMDQMIR+KQRIEETKFVVMVAMEKCS                 NG
Subjt:  MNAAGSSQRHRQEQRAYRALCCRCTCHCRLRFSSSEETESFGSERFPSDSSISHAMDQMIREKQRIEETKFVVMVAMEKCS-----------------NG

Query:  IEKPKDLRSLLNCYISMNSDECHGVILE---EMC
         EKPKDLRSLLNCYISMN+DECHGVILE   E+C
Subjt:  IEKPKDLRSLLNCYISMNSDECHGVILE---EMC

XP_023544012.1 probable transcription repressor OFP9 [Cucurbita pepo subsp. pepo]3.2e-3463.19Show/hide
Query:  MNAAGSSQRHRQEQRAYRALCCRCTCHCRLRFSSSEETESFGSERFPSDSSISHAM-----DQMIRE-----------KQRIEETKFVVMVAMEKCS---
        M A  S+QRH+QEQRA+RALCC C+C+CRL FSSSEE ESF SERFPS SSI+HAM     DQMIRE           KQR E+TKFVVMVA EKCS   
Subjt:  MNAAGSSQRHRQEQRAYRALCCRCTCHCRLRFSSSEETESFGSERFPSDSSISHAM-----DQMIRE-----------KQRIEETKFVVMVAMEKCS---

Query:  --------------NGIEKPKDLRSLLNCYISMNSDECHGVILE
                      N IE+PKDLRSLLN YISMNSDECHGVILE
Subjt:  --------------NGIEKPKDLRSLLNCYISMNSDECHGVILE

XP_038883068.1 probable transcription repressor OFP9 [Benincasa hispida]5.2e-3763.4Show/hide
Query:  MNAAGSSQRHRQEQRAYRALCCRCTCHCRLRFSSSEETESFGSERFPSDSSISHAM-----DQMIRE-----------KQRIEETKFVVMVAMEKCS---
        M A GSS +H+QEQRAYRALCC CTC+CRL FSSSEETESF SERFPS SSI+HAM     DQMIRE           KQR E+TKFVVMVAMEKCS   
Subjt:  MNAAGSSQRHRQEQRAYRALCCRCTCHCRLRFSSSEETESFGSERFPSDSSISHAM-----DQMIRE-----------KQRIEETKFVVMVAMEKCS---

Query:  --------------NGIEKPKDLRSLLNCYISMNSDECHGVILE---EMCDQI
                      N IEKPKDLR+LLN YISMNSDECHGVILE   E+C ++
Subjt:  --------------NGIEKPKDLRSLLNCYISMNSDECHGVILE---EMCDQI

TrEMBL top hitse value%identityAlignment
A0A0A0KHR6 Transcription repressor3.4e-3461.81Show/hide
Query:  MNAAGSSQRHRQEQRAYRALCCRCTCHCRLRFSSSEETESFGSERFPSDSSISHAM-----DQMIRE-----------KQRIEETKFVVMVAMEKCS---
        M AAGS+Q H QEQ AYRALCC C+C+CRL FSSSEETESF S++FPS SSI+HAM     +QMIRE           KQR E+TKFVVMVAMEKCS   
Subjt:  MNAAGSSQRHRQEQRAYRALCCRCTCHCRLRFSSSEETESFGSERFPSDSSISHAM-----DQMIRE-----------KQRIEETKFVVMVAMEKCS---

Query:  --------------NGIEKPKDLRSLLNCYISMNSDECHGVILE
                      N IE+PKDLR+LLN YISMNSDECHGVI E
Subjt:  --------------NGIEKPKDLRSLLNCYISMNSDECHGVILE

A0A5D3CN82 Transcription repressor4.4e-3459.21Show/hide
Query:  MNAAGSSQRHRQEQRAYRALCCRCTCHCRLRFSSSEETESFGSERFPSDSSISHAM-----DQMIRE-----------KQRIEETKFVVMVAMEKCS---
        M AAGS+Q H Q Q AYRALCC C+C+CRL FSSSEETESF S++FPS SSI+HAM     DQMIRE           KQR E+TKFVVMVAMEKCS   
Subjt:  MNAAGSSQRHRQEQRAYRALCCRCTCHCRLRFSSSEETESFGSERFPSDSSISHAM-----DQMIRE-----------KQRIEETKFVVMVAMEKCS---

Query:  --------------NGIEKPKDLRSLLNCYISMNSDECHGVILEEMCDQIKR
                      N IE+PKDLR+LLN YISMNSDECHGVI E+   +  R
Subjt:  --------------NGIEKPKDLRSLLNCYISMNSDECHGVILEEMCDQIKR

A0A6J1BV71 Transcription repressor7.3e-2955.48Show/hide
Query:  MNAAGSSQR-HRQEQRAYRALCCRCTCHCRLRFSSSEETESFGSERFPSDSSISHAM-----DQMIREKQRI------------EETKFVVMVAMEKCS-
        M A+ SSQR  +Q+QR YRALCC C C CRL  SSSEE ESF SE+FPS SSI+HAM     DQMIRE++ I            EETKFVVMVAMEKCS 
Subjt:  MNAAGSSQR-HRQEQRAYRALCCRCTCHCRLRFSSSEETESFGSERFPSDSSISHAM-----DQMIREKQRI------------EETKFVVMVAMEKCS-

Query:  ----------------NGIEKPKDLRSLLNCYISMNSDECHGVILE---EMCDQI
                        N I+ PKDLR+LLN YISMNS+ECH VILE   E+C  +
Subjt:  ----------------NGIEKPKDLRSLLNCYISMNSDECHGVILE---EMCDQI

A0A6J1INT5 Transcription repressor9.9e-3459.48Show/hide
Query:  MNAAGSSQRHRQEQRAYRALCCRCTCHCRLRFSSSEETESFGSERFPSDSSISHAM-----DQMIRE-----------KQRIEETKFVVMVAMEKCS---
        M A  S+QRH+QEQRA+RALCC C+C+CRL FSSSEE ES  SERFPS S I+HAM     DQMIRE           KQR E+TKFVVMVA EKCS   
Subjt:  MNAAGSSQRHRQEQRAYRALCCRCTCHCRLRFSSSEETESFGSERFPSDSSISHAM-----DQMIRE-----------KQRIEETKFVVMVAMEKCS---

Query:  --------------NGIEKPKDLRSLLNCYISMNSDECHGVILE---EMCDQI
                      N IE+PKDLRSLLN YISMNSDECHGVILE   E+C  +
Subjt:  --------------NGIEKPKDLRSLLNCYISMNSDECHGVILE---EMCDQI

A0A6J1KMM7 Transcription repressor7.8e-4776.12Show/hide
Query:  MNAAGSSQRHRQEQRAYRALCCRCTCHCRLRFSSSEETESFGSERFPSDSSISHAMDQMIREKQRIEETKFVVMVAMEKCS-----------------NG
        MNAAGSSQRHRQ+QRAYRALCCRCTC+CRL FSSSEETESFGSERFPSDSS SHAMD+MIREKQRIEETKFVVMVAMEKCS                 NG
Subjt:  MNAAGSSQRHRQEQRAYRALCCRCTCHCRLRFSSSEETESFGSERFPSDSSISHAMDQMIREKQRIEETKFVVMVAMEKCS-----------------NG

Query:  IEKPKDLRSLLNCYISMNSDECHGVILEEMCDQI
        IEKPKDLRSLLNCYISMNSDECH  ++ E+  ++
Subjt:  IEKPKDLRSLLNCYISMNSDECHGVILEEMCDQI

SwissProt top hitse value%identityAlignment
P0DKG3 Probable transcription repressor OFP93.5e-0439.24Show/hide
Query:  REKQRIEETKFVVMVAMEKCS-----------------NGIEKPKDLRSLLNCYISMNSDECHGVILE---EMCDQIKR
        R +  I  TKF+VM+AMEKCS                 N I++  +LRSLL  Y+SMN  E    ILE   E+C  + R
Subjt:  REKQRIEETKFVVMVAMEKCS-----------------NGIEKPKDLRSLLNCYISMNSDECHGVILE---EMCDQIKR

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGCAGCAGGCTCAAGCCAGCGGCATCGCCAAGAACAGAGAGCATACAGAGCCTTGTGCTGTCGATGCACTTGCCATTGCAGGCTGAGATTTTCTTCTTCAGAAGA
AACTGAAAGCTTCGGCTCTGAGCGATTCCCATCAGACTCCAGCATTTCCCACGCCATGGACCAAATGATCAGGGAAAAGCAGAGAATTGAAGAGACCAAATTTGTTGTAA
TGGTGGCTATGGAGAAATGCTCTAATGGAATTGAGAAGCCAAAGGATCTACGTAGTCTTTTGAACTGTTATATCTCCATGAACTCCGATGAATGTCATGGCGTCATTTTA
GAGGAGATGTGTGATCAGATCAAAAGGGTCATTTCCACTACCACTTCGATCCAAATGTTAAGTGACTACAATGTAAAAGAAGGCATGGCTAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGCAGCAGGCTCAAGCCAGCGGCATCGCCAAGAACAGAGAGCATACAGAGCCTTGTGCTGTCGATGCACTTGCCATTGCAGGCTGAGATTTTCTTCTTCAGAAGA
AACTGAAAGCTTCGGCTCTGAGCGATTCCCATCAGACTCCAGCATTTCCCACGCCATGGACCAAATGATCAGGGAAAAGCAGAGAATTGAAGAGACCAAATTTGTTGTAA
TGGTGGCTATGGAGAAATGCTCTAATGGAATTGAGAAGCCAAAGGATCTACGTAGTCTTTTGAACTGTTATATCTCCATGAACTCCGATGAATGTCATGGCGTCATTTTA
GAGGAGATGTGTGATCAGATCAAAAGGGTCATTTCCACTACCACTTCGATCCAAATGTTAAGTGACTACAATGTAAAAGAAGGCATGGCTAACTGA
Protein sequenceShow/hide protein sequence
MNAAGSSQRHRQEQRAYRALCCRCTCHCRLRFSSSEETESFGSERFPSDSSISHAMDQMIREKQRIEETKFVVMVAMEKCSNGIEKPKDLRSLLNCYISMNSDECHGVIL
EEMCDQIKRVISTTTSIQMLSDYNVKEGMAN