; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg07915 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07915
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRibosomal protein L11
Genome locationCarg_Chr07:1682393..1682860
RNA-Seq ExpressionCarg07915
SyntenyCarg07915
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0070180 - large ribosomal subunit rRNA binding (molecular function)
InterPro domainsIPR000911 - Ribosomal protein L11/L12
IPR006519 - Ribosomal protein L11, bacterial-type
IPR020783 - Ribosomal protein L11, C-terminal
IPR020784 - Ribosomal protein L11, N-terminal
IPR036769 - Ribosomal protein L11, C-terminal domain superfamily
IPR036796 - Ribosomal protein L11/L12, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594732.1 hypothetical protein SDJN03_11285, partial [Cucurbita argyrosperma subsp. sororia]2.3e-7898.06Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGR
        MATLKEILTRRPVA TIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGR

Query:  PGHVVASTLSLKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKVVKELD
        PGHVVASTLSLKHIYEIAKV+QSD YCQYMPLESICKSIIGTANNMGIKVVKELD
Subjt:  PGHVVASTLSLKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKVVKELD

KAG7026702.1 mrpl19, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-80100Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGR
        MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGR

Query:  PGHVVASTLSLKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKVVKELD
        PGHVVASTLSLKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKVVKELD
Subjt:  PGHVVASTLSLKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKVVKELD

XP_022926601.1 54S ribosomal protein L19, mitochondrial-like [Cucurbita moschata]2.1e-7998.71Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGR
        MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIES SGR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGR

Query:  PGHVVASTLSLKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKVVKELD
        PGHVVASTLSLKHIYEIAKV+QSDPYCQYMPLESICKSIIGTANNMGIKVVKELD
Subjt:  PGHVVASTLSLKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKVVKELD

XP_023003939.1 54S ribosomal protein L19, mitochondrial-like [Cucurbita maxima]2.8e-7695.48Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGR
        MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALG+YRLNLMAFCKDF ARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIES S R
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGR

Query:  PGHVVASTLSLKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKVVKELD
        PGHVVASTLSLKHIYEIAKV+QSDPYCQYMPLESICKSIIGTAN+ GIKVVKELD
Subjt:  PGHVVASTLSLKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKVVKELD

XP_023518358.1 54S ribosomal protein L19, mitochondrial-like [Cucurbita pepo subsp. pepo]2.8e-7695.48Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGR
        MATLKEILTRRPVAA IRLTVPAGGARPAP VGPALG+YRLNLMAFCKDF ARTQKYKADTPMAVTITAFKDNTF+FTVKSPSVTWYLKKSAGIES SGR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGR

Query:  PGHVVASTLSLKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKVVKELD
        PGHVVASTLSLKHIYEIAKV+QSDPYCQYMPLESICKSIIGTANNMGIKVVKELD
Subjt:  PGHVVASTLSLKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKVVKELD

TrEMBL top hitse value%identityAlignment
A0A6J1BU21 54S ribosomal protein L19, mitochondrial1.1e-7593.55Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGR
        MATLKEILTRRPV+ATIRLTVPAGGARPAPPVGPALG+YRLNLMAFCKDF ARTQKYK DTPMAVTITAFKDNTFEFTVKSPSVTWYLKK+AGI+S S R
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGR

Query:  PGHVVASTLSLKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKVVKELD
        PGHVVASTLSLKHIYEIAKV+QSDPYCQYMPLESICKSIIGTAN+MGIKVVKELD
Subjt:  PGHVVASTLSLKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKVVKELD

A0A6J1EFD1 54S ribosomal protein L19, mitochondrial-like1.0e-7998.71Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGR
        MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIES SGR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGR

Query:  PGHVVASTLSLKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKVVKELD
        PGHVVASTLSLKHIYEIAKV+QSDPYCQYMPLESICKSIIGTANNMGIKVVKELD
Subjt:  PGHVVASTLSLKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKVVKELD

A0A6J1GG89 54S ribosomal protein L19, mitochondrial-like1.5e-7592.9Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGR
        MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALG+YRLNLMAFCKDF ARTQKYK DTPMAVTITAFKDNTFEFTVKSPSVTWYLKK+AGIES SGR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGR

Query:  PGHVVASTLSLKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKVVKELD
        PGHVVASTL++KHIY+IAKV+QSDP+CQYMPLESICKSIIGTAN+MGIKVVKELD
Subjt:  PGHVVASTLSLKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKVVKELD

A0A6J1IPM9 54S ribosomal protein L19, mitochondrial-like2.3e-7694.19Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGR
        MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALG+YRLNLMAFCKDF ARTQKYK DTPMAVTITAFKDNTFEFTVKSPSVTWYLKK+AGIES SGR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGR

Query:  PGHVVASTLSLKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKVVKELD
        PGHVVASTL+LKHIY+IAKV+QSDPYCQYMPLESICKSIIGTAN+MGIKVVKELD
Subjt:  PGHVVASTLSLKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKVVKELD

A0A6J1KUS1 54S ribosomal protein L19, mitochondrial-like1.4e-7695.48Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGR
        MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALG+YRLNLMAFCKDF ARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIES S R
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGR

Query:  PGHVVASTLSLKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKVVKELD
        PGHVVASTLSLKHIYEIAKV+QSDPYCQYMPLESICKSIIGTAN+ GIKVVKELD
Subjt:  PGHVVASTLSLKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKVVKELD

SwissProt top hitse value%identityAlignment
A7HWQ0 50S ribosomal protein L113.1e-2542.25Show/hide
Query:  RPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGRPGHVVASTLS
        + +   I+L VPAG A P+PP+GPALG+  LN+M FCK F A TQK +   P+ V ITAF D +F F +K+P  +++LKK+A + S S  PG   A T++
Subjt:  RPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGRPGHVVASTLS

Query:  LKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKVVK
        +    EIA+ + +D       L+   K I G+A +MG++VV+
Subjt:  LKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKVVK

Q07KJ7 50S ribosomal protein L111.8e-2542.14Show/hide
Query:  RPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGRPGHVVASTLS
        + V   ++L VPAG A P+PP+GPALG+  LN+M FCK+F A+TQK + +TP+ V IT + D +F F +K+P ++++LK++A I+S S  PG  VA  +S
Subjt:  RPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGRPGHVVASTLS

Query:  LKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKV
           + EIA+ +  D  C    +ES  + + G+A +MG++V
Subjt:  LKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKV

Q9UTK2 54S ribosomal protein L19, mitochondrial6.4e-3148.89Show/hide
Query:  IRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGRPGHVVASTLSLKHIYE
        I+L VPAG A P PP+GPALG   L  + FCK+F ART  +  +TP+   IT     TF FT+ +P  +W + K+  +E  S  P H +   LSLKHIYE
Subjt:  IRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGRPGHVVASTLSLKHIYE

Query:  IAKVEQSDPYCQYMPLESICKSIIGTANNMGIKVV
        IAK++ +DP  Q + L S+CKS+IGTA +MG+KVV
Subjt:  IAKVEQSDPYCQYMPLESICKSIIGTANNMGIKVV

Q9VFJ2 39S ribosomal protein L11, mitochondrial2.8e-2636.13Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGR
        + +LK+ + R    + ++  +PAG A   PP+GP LG+  +N+ AFCKDF A+T + K   P+   I+   D +++  +  P  T++LK++AGI+  +  
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGR

Query:  PGHVVASTLSLKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKVVKELD
        PG  VA  ++LKH+YEIA ++  DP    + ++ +C+ +I  A   GIKVV+E+D
Subjt:  PGHVVASTLSLKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKVVKELD

Q9Y3B7 39S ribosomal protein L11, mitochondrial8.0e-2641.61Show/hide
Query:  LTRRPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGRPGHVVAS
        L +  V   IR  V AG A P PP+GP LG+  +++  FCK+F  RT+  K   P+   I    D TFE  +  P+V+++LK +AGIE  + + G  VA 
Subjt:  LTRRPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGRPGHVVAS

Query:  TLSLKHIYEIAKVEQSDP--YCQYMPLESICKSIIGTANNMGIKVVKEL
         ++LKH+YEIA+++  D     Q +PL S+ +SIIG+A ++GI+VVK+L
Subjt:  TLSLKHIYEIAKVEQSDP--YCQYMPLESICKSIIGTANNMGIKVVKEL

Arabidopsis top hitse value%identityAlignment
AT1G32990.1 plastid ribosomal protein l111.4e-2041.43Show/hide
Query:  RPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGRPGHVVASTLS
        + V   I+L + AG A PAPPVGPALG   +N+MAFCKD+ ART   KA   + V IT F D +F F +K+P  +  L K+AG+E  S  P       ++
Subjt:  RPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGRPGHVVASTLS

Query:  LKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKV
        +  +  IA  +  D  C    +ES  + I GTA NMGI +
Subjt:  LKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKV

AT4G35490.1 mitochondrial ribosomal protein L116.0e-6979.87Show/hide
Query:  ATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGRP
        A  KEIL RRPVAATIRLTVPAGGARPAPPVGPALG+YRLNLMAFCKDF ARTQKYK DTPMAVTITAFKDN+FEFTVKSP+V+WY+KK+AG++  S RP
Subjt:  ATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGRP

Query:  GHVVASTLSLKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKVVKELD
        GH+  +TLS++H+YEIAKV+Q+DP+CQYMPLESICKSIIGTAN+MGIK+V++L+
Subjt:  GHVVASTLSLKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKVVKELD

AT5G51610.1 Ribosomal protein L11 family protein1.2e-0530.38Show/hide
Query:  DNTFEFTVKSPSVTWYLKKSAGIESVSGRPGHVVASTLSLKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKV
        D +F F +K+P  ++ L K+AG++  S  P  +    +++  + +IA+V+  +  C    + S  ++I GTA NMGI +
Subjt:  DNTFEFTVKSPSVTWYLKKSAGIESVSGRPGHVVASTLSLKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACTTTGAAAGAGATCCTAACTAGGCGACCCGTCGCCGCCACCATCAGGCTCACTGTCCCTGCCGGCGGAGCTCGGCCAGCGCCACCGGTGGGTCCGGCGCTTGG
TAAGTACCGGCTGAATCTGATGGCCTTCTGCAAGGATTTCACTGCCCGAACTCAGAAGTACAAGGCGGACACACCCATGGCCGTCACCATCACGGCTTTTAAGGACAACA
CCTTCGAGTTCACCGTCAAGTCGCCGTCGGTCACTTGGTACCTGAAGAAATCCGCCGGGATCGAGTCTGTGAGCGGCCGCCCAGGCCATGTGGTCGCCTCCACGCTCTCC
CTCAAGCACATTTACGAGATCGCGAAAGTCGAGCAGTCCGATCCTTATTGCCAGTACATGCCATTAGAGTCCATTTGTAAGTCCATTATCGGCACTGCCAATAACATGGG
AATTAAGGTTGTTAAGGAATTGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACTTTGAAAGAGATCCTAACTAGGCGACCCGTCGCCGCCACCATCAGGCTCACTGTCCCTGCCGGCGGAGCTCGGCCAGCGCCACCGGTGGGTCCGGCGCTTGG
TAAGTACCGGCTGAATCTGATGGCCTTCTGCAAGGATTTCACTGCCCGAACTCAGAAGTACAAGGCGGACACACCCATGGCCGTCACCATCACGGCTTTTAAGGACAACA
CCTTCGAGTTCACCGTCAAGTCGCCGTCGGTCACTTGGTACCTGAAGAAATCCGCCGGGATCGAGTCTGTGAGCGGCCGCCCAGGCCATGTGGTCGCCTCCACGCTCTCC
CTCAAGCACATTTACGAGATCGCGAAAGTCGAGCAGTCCGATCCTTATTGCCAGTACATGCCATTAGAGTCCATTTGTAAGTCCATTATCGGCACTGCCAATAACATGGG
AATTAAGGTTGTTAAGGAATTGGATTGA
Protein sequenceShow/hide protein sequence
MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGKYRLNLMAFCKDFTARTQKYKADTPMAVTITAFKDNTFEFTVKSPSVTWYLKKSAGIESVSGRPGHVVASTLS
LKHIYEIAKVEQSDPYCQYMPLESICKSIIGTANNMGIKVVKELD