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Carg07918 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07918
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr07:1691292..1693178
RNA-Seq ExpressionCarg07918
SyntenyCarg07918
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026705.1 hypothetical protein SDJN02_10708, partial [Cucurbita argyrosperma subsp. argyrosperma]6.0e-88100Show/hide
Query:  MKIADTGLSRASYQHLDFSELLERQTTQLQYLGVFHLVLVAEPLLSRRRTSMVVVIINALIVYFSSNSIIIILPFAPEDFYVPTPHILSIPLQCELNLHR
        MKIADTGLSRASYQHLDFSELLERQTTQLQYLGVFHLVLVAEPLLSRRRTSMVVVIINALIVYFSSNSIIIILPFAPEDFYVPTPHILSIPLQCELNLHR
Subjt:  MKIADTGLSRASYQHLDFSELLERQTTQLQYLGVFHLVLVAEPLLSRRRTSMVVVIINALIVYFSSNSIIIILPFAPEDFYVPTPHILSIPLQCELNLHR

Query:  ASEDNKGLSHEPPILVDQQHIHNVQSSKELENVNVRAVEGKPSKANHRKGMSRRKTPIAIWLKSDSAAANCE
        ASEDNKGLSHEPPILVDQQHIHNVQSSKELENVNVRAVEGKPSKANHRKGMSRRKTPIAIWLKSDSAAANCE
Subjt:  ASEDNKGLSHEPPILVDQQHIHNVQSSKELENVNVRAVEGKPSKANHRKGMSRRKTPIAIWLKSDSAAANCE
PON66553.1 hypothetical protein PanWU01x14_109750 [Parasponia andersonii]1.3e-2956.2Show/hide
Query:  MVVVIINALIVYFSSNSIIIILPFAPEDFYVPTPHILSIPLQCELNLHRASEDNKGLSHEPPILVDQQHIHNVQSSKELENVNVRAVEGKPSKANHRKGM
        M+V+I+++ IV+ S N II+ILP APE+ ++P  H+L +  + E+NLH  S+DNKGL+ +P ILVDQQHIHN+QSSK+LENV+V AVE KP + NHRKG 
Subjt:  MVVVIINALIVYFSSNSIIIILPFAPEDFYVPTPHILSIPLQCELNLHRASEDNKGLSHEPPILVDQQHIHNVQSSKELENVNVRAVEGKPSKANHRKGM

Query:  SRRKTPIAIWLKSDSAAANCE
            TP+AI LK+  A A+CE
Subjt:  SRRKTPIAIWLKSDSAAANCE
POO01184.1 hypothetical protein TorRG33x02_029380 [Trema orientale]9.8e-3055.37Show/hide
Query:  MVVVIINALIVYFSSNSIIIILPFAPEDFYVPTPHILSIPLQCELNLHRASEDNKGLSHEPPILVDQQHIHNVQSSKELENVNVRAVEGKPSKANHRKGM
        M+V+I+++ IV+ S N II+ILP APE+ ++P  H+L +  + E+NLH  S+DNKGL+ +P ILVDQQHIHN+QSSK+LENV+V AVE KP + NHRKG 
Subjt:  MVVVIINALIVYFSSNSIIIILPFAPEDFYVPTPHILSIPLQCELNLHRASEDNKGLSHEPPILVDQQHIHNVQSSKELENVNVRAVEGKPSKANHRKGM

Query:  SRRKTPIAIWLKSDSAAANCE
          + TP+A+ LK+  A A+CE
Subjt:  SRRKTPIAIWLKSDSAAANCE
TrEMBL top hitse value%identityAlignment
A0A2P5CZT8 Uncharacterized protein6.2e-3056.2Show/hide
Query:  MVVVIINALIVYFSSNSIIIILPFAPEDFYVPTPHILSIPLQCELNLHRASEDNKGLSHEPPILVDQQHIHNVQSSKELENVNVRAVEGKPSKANHRKGM
        M+V+I+++ IV+ S N II+ILP APE+ ++P  H+L +  + E+NLH  S+DNKGL+ +P ILVDQQHIHN+QSSK+LENV+V AVE KP + NHRKG 
Subjt:  MVVVIINALIVYFSSNSIIIILPFAPEDFYVPTPHILSIPLQCELNLHRASEDNKGLSHEPPILVDQQHIHNVQSSKELENVNVRAVEGKPSKANHRKGM

Query:  SRRKTPIAIWLKSDSAAANCE
            TP+AI LK+  A A+CE
Subjt:  SRRKTPIAIWLKSDSAAANCE
A0A2P5FTR8 Uncharacterized protein4.7e-3055.37Show/hide
Query:  MVVVIINALIVYFSSNSIIIILPFAPEDFYVPTPHILSIPLQCELNLHRASEDNKGLSHEPPILVDQQHIHNVQSSKELENVNVRAVEGKPSKANHRKGM
        M+V+I+++ IV+ S N II+ILP APE+ ++P  H+L +  + E+NLH  S+DNKGL+ +P ILVDQQHIHN+QSSK+LENV+V AVE KP + NHRKG 
Subjt:  MVVVIINALIVYFSSNSIIIILPFAPEDFYVPTPHILSIPLQCELNLHRASEDNKGLSHEPPILVDQQHIHNVQSSKELENVNVRAVEGKPSKANHRKGM

Query:  SRRKTPIAIWLKSDSAAANCE
          + TP+A+ LK+  A A+CE
Subjt:  SRRKTPIAIWLKSDSAAANCE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATTGCTGATACAGGTCTTTCAAGAGCTTCATATCAGCATTTGGATTTCTCGGAGCTTCTAGAAAGGCAGACCACGCAGCTTCAGTATCTCGGTGTATTCCATCT
GGTCCTTGTCGCTGAACCTCTTTTGTCGAGGAGGAGGACTTCCATGGTAGTCGTTATCATAAATGCCCTCATAGTTTACTTCAGCAGCAATAGCATTATAATAATCCTGC
CTTTTGCACCTGAAGACTTCTACGTACCTACGCCCCATATTTTGTCGATCCCGTTGCAATGCGAACTCAACTTGCACAGAGCCAGCGAAGACAACAAAGGCCTCTCCCAT
GAACCGCCCATTCTTGTTGACCAGCAGCACATCCACAATGTCCAGTCCAGCAAAGAACTTGAAAATGTCAATGTCAGAGCAGTTGAAGGGAAGCCCTCTAAGGCGAACCA
CAGGAAAGGCATGAGTAGGAGGAAAACTCCCATAGCCATATGGTTGAAATCCGACAGTGCTGCTGCTAACTGCGAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAATTGCTGATACAGGTCTTTCAAGAGCTTCATATCAGCATTTGGATTTCTCGGAGCTTCTAGAAAGGCAGACCACGCAGCTTCAGTATCTCGGTGTATTCCATCT
GGTCCTTGTCGCTGAACCTCTTTTGTCGAGGAGGAGGACTTCCATGGTAGTCGTTATCATAAATGCCCTCATAGTTTACTTCAGCAGCAATAGCATTATAATAATCCTGC
CTTTTGCACCTGAAGACTTCTACGTACCTACGCCCCATATTTTGTCGATCCCGTTGCAATGCGAACTCAACTTGCACAGAGCCAGCGAAGACAACAAAGGCCTCTCCCAT
GAACCGCCCATTCTTGTTGACCAGCAGCACATCCACAATGTCCAGTCCAGCAAAGAACTTGAAAATGTCAATGTCAGAGCAGTTGAAGGGAAGCCCTCTAAGGCGAACCA
CAGGAAAGGCATGAGTAGGAGGAAAACTCCCATAGCCATATGGTTGAAATCCGACAGTGCTGCTGCTAACTGCGAA
Protein sequenceShow/hide protein sequence
MKIADTGLSRASYQHLDFSELLERQTTQLQYLGVFHLVLVAEPLLSRRRTSMVVVIINALIVYFSSNSIIIILPFAPEDFYVPTPHILSIPLQCELNLHRASEDNKGLSH
EPPILVDQQHIHNVQSSKELENVNVRAVEGKPSKANHRKGMSRRKTPIAIWLKSDSAAANCE