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Carg07934 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07934
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRSN1_7TM domain-containing protein
Genome locationCarg_Chr07:1779810..1780364
RNA-Seq ExpressionCarg07934
SyntenyCarg07934
Gene Ontology termsGO:0006811 - ion transport (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594753.1 hypothetical protein SDJN03_11306, partial [Cucurbita argyrosperma subsp. sororia]1.6e-6399.15Show/hide
Query:  MKNMHHIAAKSNLVDSSPETDHNAPPLCPKPRRIRPAIPSFLAPFRCAHRIHSQSSSDPRSAILNIIAGKGVEGRDCLCLNCYPSCYSGSPPGRTGNPLV
        MKNMHHIAAKSNLVDSSPETDHNAPPLCPKPRR+RPAIPSFLAPFRCAHRIHSQSSSDPRSAILNIIAGKGVEGRDCLCLNCYPSCYSGSPPGRTGNPLV
Subjt:  MKNMHHIAAKSNLVDSSPETDHNAPPLCPKPRRIRPAIPSFLAPFRCAHRIHSQSSSDPRSAILNIIAGKGVEGRDCLCLNCYPSCYSGSPPGRTGNPLV

Query:  QDVYFLHQVEIQSPFSRT
        QDVYFLHQVEIQSPFSRT
Subjt:  QDVYFLHQVEIQSPFSRT

KAG7026720.1 hypothetical protein SDJN02_10724, partial [Cucurbita argyrosperma subsp. argyrosperma]9.3e-64100Show/hide
Query:  MKNMHHIAAKSNLVDSSPETDHNAPPLCPKPRRIRPAIPSFLAPFRCAHRIHSQSSSDPRSAILNIIAGKGVEGRDCLCLNCYPSCYSGSPPGRTGNPLV
        MKNMHHIAAKSNLVDSSPETDHNAPPLCPKPRRIRPAIPSFLAPFRCAHRIHSQSSSDPRSAILNIIAGKGVEGRDCLCLNCYPSCYSGSPPGRTGNPLV
Subjt:  MKNMHHIAAKSNLVDSSPETDHNAPPLCPKPRRIRPAIPSFLAPFRCAHRIHSQSSSDPRSAILNIIAGKGVEGRDCLCLNCYPSCYSGSPPGRTGNPLV

Query:  QDVYFLHQVEIQSPFSRT
        QDVYFLHQVEIQSPFSRT
Subjt:  QDVYFLHQVEIQSPFSRT

XP_022133306.1 uncharacterized protein LOC111005918 [Momordica charantia]2.4e-4376.27Show/hide
Query:  MH-HIAAKSNLVDSSPETDHNAP--PLCPKPRRIRPAIPSFLAPFRCAHRIHSQSSSDPRSAILNIIAGKGVEGRDCLCLNCYPSCYSGSPPGRTGNPLV
        MH HIA KSNLVDSSPET++N    PLCPKPRR RP IP+FL P RCA RIHSQSS + R+ ILNIIAGK VEGRDCLC NCYPSCYSGSPP RT NPLV
Subjt:  MH-HIAAKSNLVDSSPETDHNAP--PLCPKPRRIRPAIPSFLAPFRCAHRIHSQSSSDPRSAILNIIAGKGVEGRDCLCLNCYPSCYSGSPPGRTGNPLV

Query:  QDVYFLHQVEIQSPFSRT
         DVYFLHQ+E+ SPFS T
Subjt:  QDVYFLHQVEIQSPFSRT

XP_023518149.1 uncharacterized protein LOC111781694 [Cucurbita pepo subsp. pepo]3.0e-6297.46Show/hide
Query:  MKNMHHIAAKSNLVDSSPETDHNAPPLCPKPRRIRPAIPSFLAPFRCAHRIHSQSSSDPRSAILNIIAGKGVEGRDCLCLNCYPSCYSGSPPGRTGNPLV
        MK MHHI AKSNLVDSSPETDHNAPPLCPKPRR+RPAIPSFLAPFRCAHRIHSQSSSDPRSAILNIIAGKGVEGRDCLCLNCYPSCYSGSPPGRTGNPLV
Subjt:  MKNMHHIAAKSNLVDSSPETDHNAPPLCPKPRRIRPAIPSFLAPFRCAHRIHSQSSSDPRSAILNIIAGKGVEGRDCLCLNCYPSCYSGSPPGRTGNPLV

Query:  QDVYFLHQVEIQSPFSRT
        QDVYFLHQVEIQSPFSRT
Subjt:  QDVYFLHQVEIQSPFSRT

XP_038881848.1 uncharacterized protein LOC120073212 [Benincasa hispida]5.7e-4573.98Show/hide
Query:  KNMHHIAAKSNLVDSSPET------DHNAPPLCPKPRRIRPAIPSFLAPFRCAHRIHSQSSSDPRSAILNIIAGKGVEGRDCLCLNCYPSCYSGSPPGRT
        K M+HIA KSNLVDS  +T      D+N+ PLCPKPRR+ P IPSFLAP  CAH +HSQSS D RS ILNIIAGK VEGRDCLC  CYPSCYSGSPPGRT
Subjt:  KNMHHIAAKSNLVDSSPET------DHNAPPLCPKPRRIRPAIPSFLAPFRCAHRIHSQSSSDPRSAILNIIAGKGVEGRDCLCLNCYPSCYSGSPPGRT

Query:  GNPLVQDVYFLHQVEIQSPFSRT
         NPLV DVYFLHQ+EI SPFSRT
Subjt:  GNPLVQDVYFLHQVEIQSPFSRT

TrEMBL top hitse value%identityAlignment
A0A0A0KHD1 Uncharacterized protein2.0e-4374.38Show/hide
Query:  MHHIAAKSNLVDSSPET------DHNAPPLCPKPRRIRPAIPSFLAPFRCAHRIHSQSSSDPRSAILNIIAGKGVEGRDCLCLNCYPSCYSGSPPGRTGN
        MHH A KSNLVDS  ET      D+N  PLCPKPRR+ PAIPSFLAP  CAH IHSQSS D RS ILNII GK VEGRDCL   CYPSCYSGSPPGRT N
Subjt:  MHHIAAKSNLVDSSPET------DHNAPPLCPKPRRIRPAIPSFLAPFRCAHRIHSQSSSDPRSAILNIIAGKGVEGRDCLCLNCYPSCYSGSPPGRTGN

Query:  PLVQDVYFLHQVEIQSPFSRT
        PLV D+YFLHQ+EI SPFSRT
Subjt:  PLVQDVYFLHQVEIQSPFSRT

A0A5D3CKV6 Uncharacterized protein1.3e-4271.9Show/hide
Query:  MHHIAAKSNLVDSSPET------DHNAPPLCPKPRRIRPAIPSFLAPFRCAHRIHSQSSSDPRSAILNIIAGKGVEGRDCLCLNCYPSCYSGSPPGRTGN
        MHHIA KSNLVDS  ET      D+N  PLCPKPRR+ PAIPSFL P RCAH IHSQSS D RS +LNII GK VE RDC    CYPSCYSGSPPGRT N
Subjt:  MHHIAAKSNLVDSSPET------DHNAPPLCPKPRRIRPAIPSFLAPFRCAHRIHSQSSSDPRSAILNIIAGKGVEGRDCLCLNCYPSCYSGSPPGRTGN

Query:  PLVQDVYFLHQVEIQSPFSRT
        PLV D+YFLHQ+EI+S FSRT
Subjt:  PLVQDVYFLHQVEIQSPFSRT

A0A5N6QU24 Uncharacterized protein1.0e-3159.66Show/hide
Query:  MHHIAAKSNLVDSSPETDH-----NAPPLCPKPRRIRPAIPSFLAPFRCAHRIHSQSSSDPRSAILNIIAGKGVEGRDCLCLNCYPSCYSGSPPGRTGNP
        MHH AAK NLVDS  ET+      N  PLCPKPRR+ P++P FL P RC+   HSQ + D R  ILNII+ K  +GR+ LC  C PSCYSGSPP RT NP
Subjt:  MHHIAAKSNLVDSSPETDH-----NAPPLCPKPRRIRPAIPSFLAPFRCAHRIHSQSSSDPRSAILNIIAGKGVEGRDCLCLNCYPSCYSGSPPGRTGNP

Query:  LVQDVYFLHQVEIQSPFSR
        LVQDV F+HQ+E+ SPF+R
Subjt:  LVQDVYFLHQVEIQSPFSR

A0A6J1BUP6 uncharacterized protein LOC1110059181.2e-4376.27Show/hide
Query:  MH-HIAAKSNLVDSSPETDHNAP--PLCPKPRRIRPAIPSFLAPFRCAHRIHSQSSSDPRSAILNIIAGKGVEGRDCLCLNCYPSCYSGSPPGRTGNPLV
        MH HIA KSNLVDSSPET++N    PLCPKPRR RP IP+FL P RCA RIHSQSS + R+ ILNIIAGK VEGRDCLC NCYPSCYSGSPP RT NPLV
Subjt:  MH-HIAAKSNLVDSSPETDHNAP--PLCPKPRRIRPAIPSFLAPFRCAHRIHSQSSSDPRSAILNIIAGKGVEGRDCLCLNCYPSCYSGSPPGRTGNPLV

Query:  QDVYFLHQVEIQSPFSRT
         DVYFLHQ+E+ SPFS T
Subjt:  QDVYFLHQVEIQSPFSRT

A0A6P5YNC3 uncharacterized protein LOC1112932957.7e-3258.33Show/hide
Query:  MHHIAAKSNLVDSSPETDH-----NAPPLCPKPRRIRPAIPSFLAPFRCAHRIHSQSSSDPRSAILNIIAGKGVEGRDCLCLNCYPSCYSGSPPGRTGNP
        M H+  KSNL+DS  ET       +  PLCPKPRRI PAIP FL P +C    HSQ +SD RS  LN+IA K ++GR+  C  C PSCY+GSPPGRTGNP
Subjt:  MHHIAAKSNLVDSSPETDH-----NAPPLCPKPRRIRPAIPSFLAPFRCAHRIHSQSSSDPRSAILNIIAGKGVEGRDCLCLNCYPSCYSGSPPGRTGNP

Query:  LVQDVYFLHQVEIQSPFSRT
        LV DV+F+HQ+E+ SPF+RT
Subjt:  LVQDVYFLHQVEIQSPFSRT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G16110.1 unknown protein8.5e-0732.03Show/hide
Query:  MKNMHHIAAKSNLVDSSPET---DHNAPPLCPKPRRIRPAIPSFLAPFRCAHRIH-SQSSSD-----PRSAILNIIAGKGVEGRDCLCLNCYPSCYSGSP
        +K M+H   + N   S  E    D     +CPKPRR+     + + P     R+H SQ+++D       + +L II  K   G     L+  P  + GSP
Subjt:  MKNMHHIAAKSNLVDSSPET---DHNAPPLCPKPRRIRPAIPSFLAPFRCAHRIH-SQSSSD-----PRSAILNIIAGKGVEGRDCLCLNCYPSCYSGSP

Query:  PGRTGNPLVQDVYF----LHQVEIQSPF
        P R  NPL QD  F    L+ +   SPF
Subjt:  PGRTGNPLVQDVYF----LHQVEIQSPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAATATGCATCACATAGCAGCTAAAAGCAATCTCGTTGATTCAAGTCCTGAAACCGACCATAATGCCCCCCCTCTTTGCCCTAAGCCCCGCCGCATCCGTCCCGC
CATCCCTAGTTTCCTCGCCCCGTTTCGATGCGCCCATCGTATTCATAGCCAATCTAGTAGTGATCCGAGAAGTGCAATCCTCAATATCATTGCGGGAAAGGGTGTTGAAG
GGAGAGATTGTTTGTGCTTGAATTGCTACCCGTCGTGTTATTCGGGATCTCCGCCAGGAAGAACAGGGAATCCGTTGGTTCAAGATGTGTATTTTCTTCATCAAGTGGAG
ATTCAATCGCCATTTTCGAGAACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAATATGCATCACATAGCAGCTAAAAGCAATCTCGTTGATTCAAGTCCTGAAACCGACCATAATGCCCCCCCTCTTTGCCCTAAGCCCCGCCGCATCCGTCCCGC
CATCCCTAGTTTCCTCGCCCCGTTTCGATGCGCCCATCGTATTCATAGCCAATCTAGTAGTGATCCGAGAAGTGCAATCCTCAATATCATTGCGGGAAAGGGTGTTGAAG
GGAGAGATTGTTTGTGCTTGAATTGCTACCCGTCGTGTTATTCGGGATCTCCGCCAGGAAGAACAGGGAATCCGTTGGTTCAAGATGTGTATTTTCTTCATCAAGTGGAG
ATTCAATCGCCATTTTCGAGAACCTAA
Protein sequenceShow/hide protein sequence
MKNMHHIAAKSNLVDSSPETDHNAPPLCPKPRRIRPAIPSFLAPFRCAHRIHSQSSSDPRSAILNIIAGKGVEGRDCLCLNCYPSCYSGSPPGRTGNPLVQDVYFLHQVE
IQSPFSRT