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Carg07969 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07969
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionB-box zinc finger family protein
Genome locationCarg_Chr07:1970360..1971260
RNA-Seq ExpressionCarg07969
SyntenyCarg07969
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009640 - photomorphogenesis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000315 - B-box-type zinc finger


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026753.1 B-box zinc finger protein 19 [Cucurbita argyrosperma subsp. argyrosperma]5.2e-74100Show/hide
Query:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQR
        MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQR
Subjt:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQR

Query:  VEFPGDKQHDPKDLQNQDGVDSNGDGHSKRGNEVIDLNL
        VEFPGDKQHDPKDLQNQDGVDSNGDGHSKRGNEVIDLNL
Subjt:  VEFPGDKQHDPKDLQNQDGVDSNGDGHSKRGNEVIDLNL

XP_022963232.1 B-box zinc finger protein 19-like [Cucurbita moschata]3.0e-6989.47Show/hide
Query:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQR
        MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVS CDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQR
Subjt:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQR

Query:  VEFPGDKQHDPKDL-------------QNQDGVDSNGDGHSKRGNEVIDLNL
        VEFPGDKQ+DPKDL             QNQDGVDSNGDGHSKRGNEVIDLN+
Subjt:  VEFPGDKQHDPKDL-------------QNQDGVDSNGDGHSKRGNEVIDLNL

XP_023003940.1 B-box zinc finger protein 19-like [Cucurbita maxima]1.3e-6988.82Show/hide
Query:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQR
        MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQR
Subjt:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQR

Query:  VEFPGDKQHDPKDL-------------QNQDGVDSNGDGHSKRGNEVIDLNL
        VEFPGDKQ+DPKD+             QNQDGVDSNGDGHSKRGN+VIDLN+
Subjt:  VEFPGDKQHDPKDL-------------QNQDGVDSNGDGHSKRGNEVIDLNL

XP_023517412.1 B-box zinc finger protein 18-like isoform X1 [Cucurbita pepo subsp. pepo]1.2e-6287.94Show/hide
Query:  AATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQRVEFPGDKQHDP
        +ATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDV+VHVGGKRMHKRYLRLGQRVEFPGDKQ+DP
Subjt:  AATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQRVEFPGDKQHDP

Query:  KDL-------------QNQDGVDSNGDGHSKRGNEVIDLNL
        KDL             QNQDGVDSNGDGHSKRGNEVIDLN+
Subjt:  KDL-------------QNQDGVDSNGDGHSKRGNEVIDLNL

XP_023517413.1 B-box zinc finger protein 19-like isoform X2 [Cucurbita pepo subsp. pepo]7.8e-7089.47Show/hide
Query:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQR
        MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDV+VHVGGKRMHKRYLRLGQR
Subjt:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQR

Query:  VEFPGDKQHDPKDL-------------QNQDGVDSNGDGHSKRGNEVIDLNL
        VEFPGDKQ+DPKDL             QNQDGVDSNGDGHSKRGNEVIDLN+
Subjt:  VEFPGDKQHDPKDL-------------QNQDGVDSNGDGHSKRGNEVIDLNL

TrEMBL top hitse value%identityAlignment
A0A0A0KJB1 Uncharacterized protein7.4e-5873.21Show/hide
Query:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQR
        MRILCDSCE+A ATLFCAADEAALCA CD KVHMCNKLASRHVRVGLA+PSEV RCDICENAPAFFYCEIDGSSLCLQCDV+VHVGGKRMHKRYLRL QR
Subjt:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQR

Query:  VEFPGDKQHDPKDL-------------QNQD-------------GVD---SNGDGHSKRGNEVIDLNL
        VEFPGDKQ+D KDL             QN++             GV    SNGDGHSKR N+VIDLN+
Subjt:  VEFPGDKQHDPKDL-------------QNQD-------------GVD---SNGDGHSKRGNEVIDLNL

A0A1S3B2K6 B-box zinc finger protein 19-like isoform X19.7e-5872.62Show/hide
Query:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQR
        MRILCDSCE+AAATLFCAADEAALCA CD KVHMCNKLASRHVRVGLA+PSEV RCDICENAPAFFYCEIDGSSLCLQCDV+VHVGGKRMHKRYLRL QR
Subjt:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQR

Query:  VEFPGDKQHDPKDL-------------QNQD-------------GVD---SNGDGHSKRGNEVIDLNL
        VEFPGDK++D KD              QN++             GV+   SNGDGHSKR N+VIDLN+
Subjt:  VEFPGDKQHDPKDL-------------QNQD-------------GVD---SNGDGHSKRGNEVIDLNL

A0A5A7SKM7 B-box zinc finger protein 19-like isoform X19.7e-5872.62Show/hide
Query:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQR
        MRILCDSCE+AAATLFCAADEAALCA CD KVHMCNKLASRHVRVGLA+PSEV RCDICENAPAFFYCEIDGSSLCLQCDV+VHVGGKRMHKRYLRL QR
Subjt:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQR

Query:  VEFPGDKQHDPKDL-------------QNQD-------------GVD---SNGDGHSKRGNEVIDLNL
        VEFPGDK++D KD              QN++             GV+   SNGDGHSKR N+VIDLN+
Subjt:  VEFPGDKQHDPKDL-------------QNQD-------------GVD---SNGDGHSKRGNEVIDLNL

A0A6J1HEQ5 B-box zinc finger protein 19-like1.4e-6989.47Show/hide
Query:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQR
        MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVS CDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQR
Subjt:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQR

Query:  VEFPGDKQHDPKDL-------------QNQDGVDSNGDGHSKRGNEVIDLNL
        VEFPGDKQ+DPKDL             QNQDGVDSNGDGHSKRGNEVIDLN+
Subjt:  VEFPGDKQHDPKDL-------------QNQDGVDSNGDGHSKRGNEVIDLNL

A0A6J1KT68 B-box zinc finger protein 19-like6.5e-7088.82Show/hide
Query:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQR
        MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQR
Subjt:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQR

Query:  VEFPGDKQHDPKDL-------------QNQDGVDSNGDGHSKRGNEVIDLNL
        VEFPGDKQ+DPKD+             QNQDGVDSNGDGHSKRGN+VIDLN+
Subjt:  VEFPGDKQHDPKDL-------------QNQDGVDSNGDGHSKRGNEVIDLNL

SwissProt top hitse value%identityAlignment
C0SVM5 B-box zinc finger protein 191.9e-5071.83Show/hide
Query:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQR
        MRILCD+CENAAA +FCAADEAALC  CD KVHMCNKLASRHVRVGLA PS    CDICENAPAFFYCEIDGSSLCLQCD+VVHVGGKR H R+L L QR
Subjt:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQR

Query:  VEFPGD--KQHDPKD-LQNQD-GVDSNGDGHSKRGNEVIDLN
        +EFPGD  K+++ +D LQNQ    + NG+ + K  +E+IDLN
Subjt:  VEFPGD--KQHDPKD-LQNQD-GVDSNGDGHSKRGNEVIDLN

Q96288 B-box zinc finger protein 247.0e-2149.04Show/hide
Query:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPS-EVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRM--HKRYLRL
        M+I CD CE A AT+ C ADEAALC  CD+++H  NKLAS+H R+ L S S +  RCDIC+   AF +C  D + LC  CD  +HV   R   H+R+L  
Subjt:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPS-EVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRM--HKRYLRL

Query:  GQRV
        G +V
Subjt:  GQRV

Q9SID1 B-box zinc finger protein 251.7e-1946.46Show/hide
Query:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPS-EVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRM--HKRYLRL
        M+I CD CE A ATL C ADEAALCA CDV+VH  NKLAS+H R+ L S S +   CDIC    AF +C  D + LC  CD   H    R   H+R+L  
Subjt:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPS-EVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRM--HKRYLRL

Query:  GQRVEFPG-------DKQH-DPKDLQN
        G RV           +K H DP + Q+
Subjt:  GQRVEFPG-------DKQH-DPKDLQN

Q9SJU5 B-box zinc finger protein 186.7e-4867.13Show/hide
Query:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQR
        MRILCD+CE+AAA +FCAADEAALC +CD KVH CNKLASRH+RVGLA PS    CDICENAPAFFYCEIDGSSLCLQCD+VVHVGGKR H+R+L L QR
Subjt:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQR

Query:  VEFPGDKQHDPKDLQNQDGVDSNGDGHSKRGN-----EVIDLN
        +EFPGDK +    L  +    S+G G    GN      +IDLN
Subjt:  VEFPGDKQHDPKDLQNQDGVDSNGDGHSKRGN-----EVIDLN

Q9SYM2 B-box zinc finger protein 221.8e-2150Show/hide
Query:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGL-ASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRM--HKRYLRL
        M+I C+ CE A AT+ C ADEAALC ACD K+H  NKLA +H RV L AS S + +CDIC+ A  FF+C  D + LC +CDV +H     +  H+R+L  
Subjt:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGL-ASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRM--HKRYLRL

Query:  GQRV
        G +V
Subjt:  GQRV

Arabidopsis top hitse value%identityAlignment
AT1G78600.1 light-regulated zinc finger protein 11.3e-2250Show/hide
Query:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGL-ASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRM--HKRYLRL
        M+I C+ CE A AT+ C ADEAALC ACD K+H  NKLA +H RV L AS S + +CDIC+ A  FF+C  D + LC +CDV +H     +  H+R+L  
Subjt:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGL-ASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRM--HKRYLRL

Query:  GQRV
        G +V
Subjt:  GQRV

AT2G21320.1 B-box zinc finger family protein4.8e-4967.13Show/hide
Query:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQR
        MRILCD+CE+AAA +FCAADEAALC +CD KVH CNKLASRH+RVGLA PS    CDICENAPAFFYCEIDGSSLCLQCD+VVHVGGKR H+R+L L QR
Subjt:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQR

Query:  VEFPGDKQHDPKDLQNQDGVDSNGDGHSKRGN-----EVIDLN
        +EFPGDK +    L  +    S+G G    GN      +IDLN
Subjt:  VEFPGDKQHDPKDLQNQDGVDSNGDGHSKRGN-----EVIDLN

AT4G38960.1 B-box type zinc finger family protein1.3e-5171.83Show/hide
Query:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQR
        MRILCD+CENAAA +FCAADEAALC  CD KVHMCNKLASRHVRVGLA PS    CDICENAPAFFYCEIDGSSLCLQCD+VVHVGGKR H R+L L QR
Subjt:  MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQR

Query:  VEFPGD--KQHDPKD-LQNQD-GVDSNGDGHSKRGNEVIDLN
        +EFPGD  K+++ +D LQNQ    + NG+ + K  +E+IDLN
Subjt:  VEFPGD--KQHDPKD-LQNQD-GVDSNGDGHSKRGNEVIDLN

AT4G38960.2 B-box type zinc finger family protein1.8e-3568.81Show/hide
Query:  MCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQRVEFPGD--KQHDPKD-LQNQD-GVDSNGDGHSK
        MCNKLASRHVRVGLA PS    CDICENAPAFFYCEIDGSSLCLQCD+VVHVGGKR H R+L L QR+EFPGD  K+++ +D LQNQ    + NG+ + K
Subjt:  MCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQRVEFPGD--KQHDPKD-LQNQD-GVDSNGDGHSK

Query:  RGNEVIDLN
          +E+IDLN
Subjt:  RGNEVIDLN

AT4G38960.3 B-box type zinc finger family protein2.4e-4555.14Show/hide
Query:  MRILCDSCENAAATLFCAADEAALCAACDVK-------------------------------------------VHMCNKLASRHVRVGLASPSEVSRCD
        MRILCD+CENAAA +FCAADEAALC  CD K                                           VHMCNKLASRHVRVGLA PS    CD
Subjt:  MRILCDSCENAAATLFCAADEAALCAACDVK-------------------------------------------VHMCNKLASRHVRVGLASPSEVSRCD

Query:  ICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQRVEFPGD--KQHDPKD-LQNQD-GVDSNGDGHSKRGNEVIDLN
        ICENAPAFFYCEIDGSSLCLQCD+VVHVGGKR H R+L L QR+EFPGD  K+++ +D LQNQ    + NG+ + K  +E+IDLN
Subjt:  ICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQRVEFPGD--KQHDPKD-LQNQD-GVDSNGDGHSKRGNEVIDLN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGATACTTTGTGATTCCTGTGAAAATGCTGCAGCGACCTTGTTTTGTGCAGCTGATGAGGCTGCTCTTTGTGCAGCATGTGATGTCAAGGTGCACATGTGCAATAA
GCTTGCGAGCCGCCATGTAAGGGTTGGGCTAGCAAGTCCGAGCGAAGTTTCCCGCTGTGATATATGTGAAAATGCACCAGCTTTCTTTTACTGTGAGATAGATGGAAGCT
CCTTGTGCTTACAATGCGACGTGGTTGTTCATGTGGGAGGCAAGAGAATGCACAAGAGATATCTTCGGCTGGGGCAGAGAGTTGAGTTTCCTGGGGATAAACAACATGAT
CCAAAGGACTTGCAGAATCAAGATGGGGTTGATTCAAATGGAGATGGGCATTCCAAGCGGGGGAACGAAGTGATTGATTTGAACCTGTAG
mRNA sequenceShow/hide mRNA sequence
TGTCTATGGTCATCGGTCGGCATTATTTGTTATAACCTAAAGACTGCAGTGGCCGACACCAAGAACATCAGATATCAGGAACAGGGGGACGACCAAAATGAAATTTTGAA
GGCACCCTTTTCAGGTTTTGATCGAGTTATGTGTTTTTTATGAAGTTTAGGAGGTGGGTTTTTGAGATTGATCGTAAAGTTTCCATCTTTTTAATGGTTTATGTTGTGAG
TGGCAATGAGTGATCGGTTTTGATGAGGATACTTTGTGATTCCTGTGAAAATGCTGCAGCGACCTTGTTTTGTGCAGCTGATGAGGCTGCTCTTTGTGCAGCATGTGATG
TCAAGGTGCACATGTGCAATAAGCTTGCGAGCCGCCATGTAAGGGTTGGGCTAGCAAGTCCGAGCGAAGTTTCCCGCTGTGATATATGTGAAAATGCACCAGCTTTCTTT
TACTGTGAGATAGATGGAAGCTCCTTGTGCTTACAATGCGACGTGGTTGTTCATGTGGGAGGCAAGAGAATGCACAAGAGATATCTTCGGCTGGGGCAGAGAGTTGAGTT
TCCTGGGGATAAACAACATGATCCAAAGGACTTGCAGAATCAAGATGGGGTTGATTCAAATGGAGATGGGCATTCCAAGCGGGGGAACGAAGTGATTGATTTGAACCTGT
AG
Protein sequenceShow/hide protein sequence
MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQRVEFPGDKQHD
PKDLQNQDGVDSNGDGHSKRGNEVIDLNL