; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg07971 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07971
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUPF0183 protein At3g51130
Genome locationCarg_Chr07:1974039..1975725
RNA-Seq ExpressionCarg07971
SyntenyCarg07971
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR005373 - Phagosome assembly factor 1
IPR039156 - PHAF1/Protein broad-minded


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594789.1 UPF0183 protein, partial [Cucurbita argyrosperma subsp. sororia]7.2e-9197.02Show/hide
Query:  KATMQRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRL
        KA + RSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRL
Subjt:  KATMQRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRL

Query:  QMRYATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQYSDCCHDGEGIL
        QMRYATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQYSDCCHDGE  L
Subjt:  QMRYATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQYSDCCHDGEGIL

KAG7026755.1 UPF0183 protein, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-119100Show/hide
Query:  RLLDFACELRRAAIRDRELAIRNHKHLSARFAKATEKSEPSIQPKATMQRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVH
        RLLDFACELRRAAIRDRELAIRNHKHLSARFAKATEKSEPSIQPKATMQRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVH
Subjt:  RLLDFACELRRAAIRDRELAIRNHKHLSARFAKATEKSEPSIQPKATMQRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVH

Query:  VKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRYATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQ
        VKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRYATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQ
Subjt:  VKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRYATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQ

Query:  YSDCCHDGEGILS
        YSDCCHDGEGILS
Subjt:  YSDCCHDGEGILS

XP_022963231.1 UPF0183 protein At3g51130 [Cucurbita moschata]4.2e-9198.79Show/hide
Query:  MQRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMR
        MQRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMR
Subjt:  MQRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMR

Query:  YATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQYSDCCHDGEGIL
        YATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQYSDCCHDGE  L
Subjt:  YATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQYSDCCHDGEGIL

XP_023003902.1 UPF0183 protein At3g51130 [Cucurbita maxima]4.2e-9198.79Show/hide
Query:  MQRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMR
        MQRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMR
Subjt:  MQRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMR

Query:  YATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQYSDCCHDGEGIL
        YATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQYSDCCHDGE  L
Subjt:  YATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQYSDCCHDGEGIL

XP_023517411.1 UPF0183 protein At3g51130 [Cucurbita pepo subsp. pepo]4.2e-9198.79Show/hide
Query:  MQRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMR
        MQRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMR
Subjt:  MQRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMR

Query:  YATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQYSDCCHDGEGIL
        YATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQYSDCCHDGE  L
Subjt:  YATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQYSDCCHDGEGIL

TrEMBL top hitse value%identityAlignment
A0A0A0KH65 Uncharacterized protein9.5e-8996.34Show/hide
Query:  QRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRY
        QRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRY
Subjt:  QRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRY

Query:  ATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQYSDCCHDGEGIL
        ATSLIGGPSNLATFVAVYALFGPTFPGI D+DR VYTLFYPGLSFAFPIPSQY+DCCHDGE  L
Subjt:  ATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQYSDCCHDGEGIL

A0A1S3B1H9 UPF0183 protein At3g511304.7e-8895.12Show/hide
Query:  QRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRY
        QRSRRRCEGTAMGAI+LDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRY
Subjt:  QRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRY

Query:  ATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQYSDCCHDGEGIL
        ATSLIGGPSNLATFVAVYALFGPTFPGI D+DR VYTLFYPGLSFAFPIP+QY+DCCHDGE  L
Subjt:  ATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQYSDCCHDGEGIL

A0A5D3CN38 UPF0183 protein4.7e-8895.12Show/hide
Query:  QRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRY
        QRSRRRCEGTAMGAI+LDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRY
Subjt:  QRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRY

Query:  ATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQYSDCCHDGEGIL
        ATSLIGGPSNLATFVAVYALFGPTFPGI D+DR VYTLFYPGLSFAFPIP+QY+DCCHDGE  L
Subjt:  ATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQYSDCCHDGEGIL

A0A6J1HFL0 UPF0183 protein At3g511302.1e-9198.79Show/hide
Query:  MQRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMR
        MQRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMR
Subjt:  MQRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMR

Query:  YATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQYSDCCHDGEGIL
        YATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQYSDCCHDGE  L
Subjt:  YATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQYSDCCHDGEGIL

A0A6J1KNX2 UPF0183 protein At3g511302.1e-9198.79Show/hide
Query:  MQRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMR
        MQRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMR
Subjt:  MQRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMR

Query:  YATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQYSDCCHDGEGIL
        YATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQYSDCCHDGE  L
Subjt:  YATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQYSDCCHDGEGIL

SwissProt top hitse value%identityAlignment
O08654 Phagosome assembly factor 11.8e-1530.22Show/hide
Query:  LDLQPGLGLG----PFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRYATSLIGGPSNLA
        L++ P   LG     F LGMP+ +A A +++   I   V V Y ++ PL  D++++    G  L FD ++QRL++IE++D+ +++++Y        +   
Subjt:  LDLQPGLGLG----PFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRYATSLIGGPSNLA

Query:  TFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPS
        T   +   FG T PG+ +    ++ L + GLSF+F + S
Subjt:  TFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPS

P34692 PHAF1 protein T01G9.24.5e-1936.72Show/hide
Query:  FNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRYATSLIGGPSNLATFVAVYALFGPTFPG
        F LGMPI +  A I+Q P +   V +KY  ++P   DI+I     G  L FD  SQ ++LIE+ ++  + + Y  ++   P+N+AT   V   FG T PG
Subjt:  FNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRYATSLIGGPSNLATFVAVYALFGPTFPG

Query:  INDRDRSVYTLFYPGLSFAFPIPSQYSD
          D   ++Y   +PGLSF FP   + S+
Subjt:  INDRDRSVYTLFYPGLSFAFPIPSQYSD

Q9BSU1 Phagosome assembly factor 15.1e-1530.22Show/hide
Query:  LDLQPGLGLG----PFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRYATSLIGGPSNLA
        L++ P   LG     F LGMP+ +A A +++   I   V V Y ++ PL  D++++    G  L FD ++QRL++IE+ D+ +++++Y        +   
Subjt:  LDLQPGLGLG----PFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRYATSLIGGPSNLA

Query:  TFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPS
        T   +   FG T PG+ +    ++ L + GLSF+F + S
Subjt:  TFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPS

Q9SD33 PHAF1 protein At3g511308.9e-8480.11Show/hide
Query:  KSEPSIQPKATMQRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLI
        K    I  K  MQR RRR EGTAMGA V DL+PG+G+GPF++GMPICEAFAQIEQ+PNIYDVVHVKY+DE+PLKLD+VISFPDHGFHLRFDPWSQRLRL+
Subjt:  KSEPSIQPKATMQRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLI

Query:  EIFDVKRLQMRYATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQYSDCCHDGEGIL
        EIFDVKRLQMRYATS+IGGPS LATFVAVYALFGPTFPGI D++R +Y+LFYPGLSF FPIP+QY+DCCHDGE  L
Subjt:  EIFDVKRLQMRYATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQYSDCCHDGEGIL

Q9VSH9 PHAF1 protein CG70832.4e-2037.86Show/hide
Query:  LDLQPGLGLG----PFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRYATSLIGGPSNLA
        L++ P + LG     F LGM   +A A I+ +  I   V V Y D  PL +DI+I+ P  G  L FDP SQRL+ IE+F++K +++RY       P  L 
Subjt:  LDLQPGLGLG----PFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRYATSLIGGPSNLA

Query:  TFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQ
        +   +   FG T PG+ D  + ++ L + GLSF FP+ S+
Subjt:  TFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQ

Arabidopsis top hitse value%identityAlignment
AT3G51130.1 unknown protein6.3e-8580.11Show/hide
Query:  KSEPSIQPKATMQRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLI
        K    I  K  MQR RRR EGTAMGA V DL+PG+G+GPF++GMPICEAFAQIEQ+PNIYDVVHVKY+DE+PLKLD+VISFPDHGFHLRFDPWSQRLRL+
Subjt:  KSEPSIQPKATMQRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLI

Query:  EIFDVKRLQMRYATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQYSDCCHDGEGIL
        EIFDVKRLQMRYATS+IGGPS LATFVAVYALFGPTFPGI D++R +Y+LFYPGLSF FPIP+QY+DCCHDGE  L
Subjt:  EIFDVKRLQMRYATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQYSDCCHDGEGIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGGCTGTTGGACTTTGCGTGCGAACTGCGAAGAGCTGCCATTAGAGATAGAGAACTTGCCATAAGAAATCATAAACACCTGTCCGCTCGTTTCGCGAAAGCCACGGAGAA
AAGTGAACCATCAATCCAACCAAAGGCAACGATGCAGAGATCGAGACGACGTTGTGAGGGCACGGCTATGGGCGCCATCGTCCTCGATCTTCAACCCGGCCTTGGACTTG
GCCCCTTCAATCTCGGAATGCCAATCTGTGAAGCATTTGCACAAATAGAGCAGCGGCCCAACATCTATGACGTTGTCCATGTGAAATACTTCGACGAGGAGCCACTGAAA
CTTGATATCGTTATCAGCTTCCCAGATCACGGTTTTCATCTTCGATTTGACCCGTGGTCACAGAGGTTACGTCTTATTGAAATATTTGATGTGAAGCGACTTCAAATGCG
ATATGCTACTTCTCTGATTGGAGGACCATCAAATCTTGCTACCTTTGTAGCTGTATATGCGCTTTTTGGGCCAACTTTTCCTGGAATTAATGACAGAGATAGAAGTGTTT
ACACTCTATTCTATCCAGGACTTTCATTTGCATTTCCAATACCAAGCCAATATTCAGATTGTTGCCATGATGGAGAAGGTATTTTATCATAA
mRNA sequenceShow/hide mRNA sequence
CGGCTGTTGGACTTTGCGTGCGAACTGCGAAGAGCTGCCATTAGAGATAGAGAACTTGCCATAAGAAATCATAAACACCTGTCCGCTCGTTTCGCGAAAGCCACGGAGAA
AAGTGAACCATCAATCCAACCAAAGGCAACGATGCAGAGATCGAGACGACGTTGTGAGGGCACGGCTATGGGCGCCATCGTCCTCGATCTTCAACCCGGCCTTGGACTTG
GCCCCTTCAATCTCGGAATGCCAATCTGTGAAGCATTTGCACAAATAGAGCAGCGGCCCAACATCTATGACGTTGTCCATGTGAAATACTTCGACGAGGAGCCACTGAAA
CTTGATATCGTTATCAGCTTCCCAGATCACGGTTTTCATCTTCGATTTGACCCGTGGTCACAGAGGTTACGTCTTATTGAAATATTTGATGTGAAGCGACTTCAAATGCG
ATATGCTACTTCTCTGATTGGAGGACCATCAAATCTTGCTACCTTTGTAGCTGTATATGCGCTTTTTGGGCCAACTTTTCCTGGAATTAATGACAGAGATAGAAGTGTTT
ACACTCTATTCTATCCAGGACTTTCATTTGCATTTCCAATACCAAGCCAATATTCAGATTGTTGCCATGATGGAGAAGGTATTTTATCATAA
Protein sequenceShow/hide protein sequence
RLLDFACELRRAAIRDRELAIRNHKHLSARFAKATEKSEPSIQPKATMQRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLK
LDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRYATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIPSQYSDCCHDGEGILS