; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg07975 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07975
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X1
Genome locationCarg_Chr04:1560415..1562282
RNA-Seq ExpressionCarg07975
SyntenyCarg07975
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600134.1 hypothetical protein SDJN03_05367, partial [Cucurbita argyrosperma subsp. sororia]3.1e-4351.13Show/hide
Query:  MGRVLYGCALVLVSPAKISCFNGLLHPTFCPFPSRVTFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVVVSFSLQYSALSAQIDSENIGPANIATELVL
        MGRVLYGCALVLVSPAKISCFNGLLHPTFCPFPSRVTFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVV                              
Subjt:  MGRVLYGCALVLVSPAKISCFNGLLHPTFCPFPSRVTFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVVVSFSLQYSALSAQIDSENIGPANIATELVL

Query:  FPRQLPLIAQKFSECLTSAAIIDMLLIFGEYCMWSTEVLGHYWWSLSPKMVIALDEGKLPGAPFASRTSILSAQNHLADDEGKTVCFITKILQYSVNSID
                                                                                     ADDEGKTVCFITKILQYSVNSID
Subjt:  FPRQLPLIAQKFSECLTSAAIIDMLLIFGEYCMWSTEVLGHYWWSLSPKMVIALDEGKLPGAPFASRTSILSAQNHLADDEGKTVCFITKILQYSVNSID

Query:  IFVAIHMTYFSQYMNHSGAVL
        IFVAIHMTYFSQYMNHSGAV+
Subjt:  IFVAIHMTYFSQYMNHSGAVL

KAG7030800.1 hypothetical protein SDJN02_04837, partial [Cucurbita argyrosperma subsp. argyrosperma]5.3e-192100Show/hide
Query:  MGRVLYGCALVLVSPAKISCFNGLLHPTFCPFPSRVTFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVVVSFSLQYSALSAQIDSENIGPANIATELVL
        MGRVLYGCALVLVSPAKISCFNGLLHPTFCPFPSRVTFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVVVSFSLQYSALSAQIDSENIGPANIATELVL
Subjt:  MGRVLYGCALVLVSPAKISCFNGLLHPTFCPFPSRVTFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVVVSFSLQYSALSAQIDSENIGPANIATELVL

Query:  FPRQLPLIAQKFSECLTSAAIIDMLLIFGEYCMWSTEVLGHYWWSLSPKMVIALDEGKLPGAPFASRTSILSAQNHLADDEGKTVCFITKILQYSVNSID
        FPRQLPLIAQKFSECLTSAAIIDMLLIFGEYCMWSTEVLGHYWWSLSPKMVIALDEGKLPGAPFASRTSILSAQNHLADDEGKTVCFITKILQYSVNSID
Subjt:  FPRQLPLIAQKFSECLTSAAIIDMLLIFGEYCMWSTEVLGHYWWSLSPKMVIALDEGKLPGAPFASRTSILSAQNHLADDEGKTVCFITKILQYSVNSID

Query:  IFVAIHMTYFSQYMNHSGAVLAASEMLCNDGLQAFGLAAVAFAAGVLMRCLSCLTTCNVYFTEIIVICCDSKGNKSGYLLAIFSLISGSRLLRLPLRLRQ
        IFVAIHMTYFSQYMNHSGAVLAASEMLCNDGLQAFGLAAVAFAAGVLMRCLSCLTTCNVYFTEIIVICCDSKGNKSGYLLAIFSLISGSRLLRLPLRLRQ
Subjt:  IFVAIHMTYFSQYMNHSGAVLAASEMLCNDGLQAFGLAAVAFAAGVLMRCLSCLTTCNVYFTEIIVICCDSKGNKSGYLLAIFSLISGSRLLRLPLRLRQ

Query:  LLLGFCILFSSQHLYNLCKFQQNVKRAELKQKEMKELQKDQRGTIP
        LLLGFCILFSSQHLYNLCKFQQNVKRAELKQKEMKELQKDQRGTIP
Subjt:  LLLGFCILFSSQHLYNLCKFQQNVKRAELKQKEMKELQKDQRGTIP

XP_008446243.1 PREDICTED: uncharacterized protein LOC103489034 isoform X1 [Cucumis melo]4.3e-1641.21Show/hide
Query:  YGCALVL---VSPAKISCFNGLLHPTFCPFPSRV-TFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVVVSFSLQYSALSAQIDSENIGPANIATELVLF
        YGCALV    VSPAKI+ FNGL +PTF  FPS V   VNC LT SV YR+ PI A YV  +PI EF              A+++++             F
Subjt:  YGCALVL---VSPAKISCFNGLLHPTFCPFPSRV-TFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVVVSFSLQYSALSAQIDSENIGPANIATELVLF

Query:  PRQLPLIAQKFSECLTS--AAIIDML-LIFGEYCMWSTEVLGHYWWSLSPKMVIALDEGKLPGAPFASRTSILSAQNHLADD
          QL     K  E   +   +++D+   IFGEY        G         M IAL+E KLPGAP A+RTS+L AQN+L +D
Subjt:  PRQLPLIAQKFSECLTS--AAIIDML-LIFGEYCMWSTEVLGHYWWSLSPKMVIALDEGKLPGAPFASRTSILSAQNHLADD

XP_022151033.1 protein PLASTID REDOX INSENSITIVE 2-like [Momordica charantia]1.6e-1841.76Show/hide
Query:  LYGCALVLVS---PAKISCFNGLLHPTFCPFPSRV-TFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVVVSFSLQYSALSAQIDSENIGPANIATELVL
        L+GCAL+L S   PAKI+CFNGLLHPTF PFPS V  FVNC  T S  YR+ P+  ++V  DPI EF    +   +   LS +          +A +   
Subjt:  LYGCALVLVS---PAKISCFNGLLHPTFCPFPSRV-TFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVVVSFSLQYSALSAQIDSENIGPANIATELVL

Query:  FPRQLPLIAQKFSECLTSAAIIDMLLIFGEYCMWSTEVLGHYWWSLSP--KMVIALDEGKLPGAPFASRTSILSAQNHLADD
        F   L  + +  S+            IFGEY     E  G     + P   M IAL+E KLPGA  A+RTS+L AQNHL  D
Subjt:  FPRQLPLIAQKFSECLTSAAIIDMLLIFGEYCMWSTEVLGHYWWSLSP--KMVIALDEGKLPGAPFASRTSILSAQNHLADD

XP_023553226.1 uncharacterized protein LOC111810699 [Cucurbita pepo subsp. pepo]3.1e-4351.58Show/hide
Query:  MGRVLYGCALVLVSPAKISCFNGLLHPTFCPFPSRVTFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVVVSFSLQYSALSAQIDSENIGPANIATELVL
        MGRVLYG A+VLVSPAKISCFNGLLHPTFCPFPSRVTFVNCNLTLSVGYRSNPIVAEYVCLDP+AEFVV+ +                            
Subjt:  MGRVLYGCALVLVSPAKISCFNGLLHPTFCPFPSRVTFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVVVSFSLQYSALSAQIDSENIGPANIATELVL

Query:  FPRQLPLIAQKFSECLTSAAIIDMLLIFGEYCMWSTEVLGHYWWSLSPKMVIALDEGKLPGAPFASRTSILSAQNHLADDEGKTVCFITKILQYSVNSID
                 Q+F E                               +S K+                R +I+      ADDEGKTVCFITKILQYSVN ID
Subjt:  FPRQLPLIAQKFSECLTSAAIIDMLLIFGEYCMWSTEVLGHYWWSLSPKMVIALDEGKLPGAPFASRTSILSAQNHLADDEGKTVCFITKILQYSVNSID

Query:  IFVAIHMTYFSQYMNHSGAVL
        IFVAI MTYFSQYMNHSGAV+
Subjt:  IFVAIHMTYFSQYMNHSGAVL

TrEMBL top hitse value%identityAlignment
A0A1S3BEK8 uncharacterized protein LOC103489034 isoform X12.1e-1641.21Show/hide
Query:  YGCALVL---VSPAKISCFNGLLHPTFCPFPSRV-TFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVVVSFSLQYSALSAQIDSENIGPANIATELVLF
        YGCALV    VSPAKI+ FNGL +PTF  FPS V   VNC LT SV YR+ PI A YV  +PI EF              A+++++             F
Subjt:  YGCALVL---VSPAKISCFNGLLHPTFCPFPSRV-TFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVVVSFSLQYSALSAQIDSENIGPANIATELVLF

Query:  PRQLPLIAQKFSECLTS--AAIIDML-LIFGEYCMWSTEVLGHYWWSLSPKMVIALDEGKLPGAPFASRTSILSAQNHLADD
          QL     K  E   +   +++D+   IFGEY        G         M IAL+E KLPGAP A+RTS+L AQN+L +D
Subjt:  PRQLPLIAQKFSECLTS--AAIIDML-LIFGEYCMWSTEVLGHYWWSLSPKMVIALDEGKLPGAPFASRTSILSAQNHLADD

A0A5A7SZ04 Uncharacterized protein2.1e-1641.21Show/hide
Query:  YGCALVL---VSPAKISCFNGLLHPTFCPFPSRV-TFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVVVSFSLQYSALSAQIDSENIGPANIATELVLF
        YGCALV    VSPAKI+ FNGL +PTF  FPS V   VNC LT SV YR+ PI A YV  +PI EF              A+++++             F
Subjt:  YGCALVL---VSPAKISCFNGLLHPTFCPFPSRV-TFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVVVSFSLQYSALSAQIDSENIGPANIATELVLF

Query:  PRQLPLIAQKFSECLTS--AAIIDML-LIFGEYCMWSTEVLGHYWWSLSPKMVIALDEGKLPGAPFASRTSILSAQNHLADD
          QL     K  E   +   +++D+   IFGEY        G         M IAL+E KLPGAP A+RTS+L AQN+L +D
Subjt:  PRQLPLIAQKFSECLTS--AAIIDML-LIFGEYCMWSTEVLGHYWWSLSPKMVIALDEGKLPGAPFASRTSILSAQNHLADD

A0A6J1DB25 protein PLASTID REDOX INSENSITIVE 2-like7.6e-1941.76Show/hide
Query:  LYGCALVLVS---PAKISCFNGLLHPTFCPFPSRV-TFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVVVSFSLQYSALSAQIDSENIGPANIATELVL
        L+GCAL+L S   PAKI+CFNGLLHPTF PFPS V  FVNC  T S  YR+ P+  ++V  DPI EF    +   +   LS +          +A +   
Subjt:  LYGCALVLVS---PAKISCFNGLLHPTFCPFPSRV-TFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVVVSFSLQYSALSAQIDSENIGPANIATELVL

Query:  FPRQLPLIAQKFSECLTSAAIIDMLLIFGEYCMWSTEVLGHYWWSLSP--KMVIALDEGKLPGAPFASRTSILSAQNHLADD
        F   L  + +  S+            IFGEY     E  G     + P   M IAL+E KLPGA  A+RTS+L AQNHL  D
Subjt:  FPRQLPLIAQKFSECLTSAAIIDMLLIFGEYCMWSTEVLGHYWWSLSP--KMVIALDEGKLPGAPFASRTSILSAQNHLADD

A0A6J1GYK9 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X12.1e-1337.36Show/hide
Query:  YGCALV---LVSPAKISCFNGLLHPTFCPFPSRVT--FVNCNLTLSVGYRSNPIVAEYVCL--DPIAEFVVVVSFSLQYSALSAQIDSENIGPANIATEL
        Y C LV    VSPAK +CFNGL +PTF P  S +   FVNC LT S+ YR+ P  A   C+  DPI EF  V     +      Q+  +      +A + 
Subjt:  YGCALV---LVSPAKISCFNGLLHPTFCPFPSRVT--FVNCNLTLSVGYRSNPIVAEYVCL--DPIAEFVVVVSFSLQYSALSAQIDSENIGPANIATEL

Query:  VLFPRQLPLIAQKFSECLTSAAIIDMLLIFGEYCMWSTEVLGHYWWSLSPKMVIALDEGKLPGAPFASRTSILSAQNHLADD
          F   L  + +  S+            IF EY        G         M IAL+E KLPGAP A+RTS+L AQN+L  D
Subjt:  VLFPRQLPLIAQKFSECLTSAAIIDMLLIFGEYCMWSTEVLGHYWWSLSPKMVIALDEGKLPGAPFASRTSILSAQNHLADD

A0A6J1JDH3 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X11.6e-1338.67Show/hide
Query:  YGCALV---LVSPAKISCFNGLLHPTFCPFPS-RVTFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVVVS--FSLQYSALSAQIDSENIGPANIATELV
        Y C LV    VSPAK +CFNGL +PTF P  S    FVNC LT S+ YR+ P  A  V  DPI EF  V +  F  Q S               +A +  
Subjt:  YGCALV---LVSPAKISCFNGLLHPTFCPFPS-RVTFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVVVS--FSLQYSALSAQIDSENIGPANIATELV

Query:  LFPRQLPLIAQKFSECLTSAAIIDMLLIFGEYCMWSTEVLGHYWWSLSPKMVIALDEGKLPGAPFASRTSILSAQNHLADD
         F   L  + +  S+            IF EY        G         M IAL+E KLPGAP A+RTS+L AQN+L  D
Subjt:  LFPRQLPLIAQKFSECLTSAAIIDMLLIFGEYCMWSTEVLGHYWWSLSPKMVIALDEGKLPGAPFASRTSILSAQNHLADD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCGGGTGCTCTACGGTTGTGCTCTTGTCTTGGTTTCTCCCGCCAAGATCTCATGTTTTAACGGTCTTCTTCATCCAACATTTTGTCCTTTCCCTTCTCGTGTAAC
CTTCGTCAATTGTAACTTAACTTTGTCCGTCGGTTACAGAAGCAATCCGATCGTGGCCGAGTATGTATGCCTAGATCCGATAGCGGAATTTGTAGTAGTCGTAAGTTTTT
CTCTCCAATATAGCGCTTTATCTGCTCAAATTGATTCCGAAAACATCGGACCTGCCAATATAGCTACAGAACTAGTACTGTTTCCAAGACAGCTTCCATTAATTGCGCAG
AAATTTTCTGAATGTTTGACCAGTGCTGCCATTATTGATATGCTTCTTATATTTGGTGAATATTGCATGTGGAGTACGGAGGTTCTGGGACATTATTGGTGGAGCCTTTC
ACCCAAAATGGTTATTGCTCTCGATGAGGGGAAACTACCAGGAGCGCCATTTGCCTCAAGAACTTCGATCCTTTCAGCTCAAAATCATCTAGCAGATGATGAAGGAAAAA
CTGTATGCTTCATCACAAAGATTCTCCAATACAGTGTCAATTCCATTGATATCTTTGTTGCTATACACATGACTTATTTCTCTCAATACATGAATCATTCTGGGGCTGTG
CTGGCAGCTTCAGAAATGCTCTGCAATGATGGTCTCCAAGCCTTTGGCCTCGCTGCAGTGGCGTTTGCTGCTGGTGTTCTGATGCGATGTCTTTCATGTTTGACTACCTG
CAATGTTTATTTCACAGAGATTATTGTCATCTGCTGTGATTCAAAAGGAAACAAATCTGGTTACCTGCTGGCTATTTTCAGTCTCATCTCCGGCAGCCGGCTTCTCCGGC
TTCCTCTCCGACTCCGGCAATTGCTTCTTGGATTTTGCATACTTTTTAGCTCGCAACACCTTTATAACCTCTGCAAATTCCAACAAAACGTCAAAAGGGCTGAACTAAAA
CAGAAGGAAATGAAAGAACTTCAAAAAGATCAAAGAGGCACCATACCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGCGGGTGCTCTACGGTTGTGCTCTTGTCTTGGTTTCTCCCGCCAAGATCTCATGTTTTAACGGTCTTCTTCATCCAACATTTTGTCCTTTCCCTTCTCGTGTAAC
CTTCGTCAATTGTAACTTAACTTTGTCCGTCGGTTACAGAAGCAATCCGATCGTGGCCGAGTATGTATGCCTAGATCCGATAGCGGAATTTGTAGTAGTCGTAAGTTTTT
CTCTCCAATATAGCGCTTTATCTGCTCAAATTGATTCCGAAAACATCGGACCTGCCAATATAGCTACAGAACTAGTACTGTTTCCAAGACAGCTTCCATTAATTGCGCAG
AAATTTTCTGAATGTTTGACCAGTGCTGCCATTATTGATATGCTTCTTATATTTGGTGAATATTGCATGTGGAGTACGGAGGTTCTGGGACATTATTGGTGGAGCCTTTC
ACCCAAAATGGTTATTGCTCTCGATGAGGGGAAACTACCAGGAGCGCCATTTGCCTCAAGAACTTCGATCCTTTCAGCTCAAAATCATCTAGCAGATGATGAAGGAAAAA
CTGTATGCTTCATCACAAAGATTCTCCAATACAGTGTCAATTCCATTGATATCTTTGTTGCTATACACATGACTTATTTCTCTCAATACATGAATCATTCTGGGGCTGTG
CTGGCAGCTTCAGAAATGCTCTGCAATGATGGTCTCCAAGCCTTTGGCCTCGCTGCAGTGGCGTTTGCTGCTGGTGTTCTGATGCGATGTCTTTCATGTTTGACTACCTG
CAATGTTTATTTCACAGAGATTATTGTCATCTGCTGTGATTCAAAAGGAAACAAATCTGGTTACCTGCTGGCTATTTTCAGTCTCATCTCCGGCAGCCGGCTTCTCCGGC
TTCCTCTCCGACTCCGGCAATTGCTTCTTGGATTTTGCATACTTTTTAGCTCGCAACACCTTTATAACCTCTGCAAATTCCAACAAAACGTCAAAAGGGCTGAACTAAAA
CAGAAGGAAATGAAAGAACTTCAAAAAGATCAAAGAGGCACCATACCCTGA
Protein sequenceShow/hide protein sequence
MGRVLYGCALVLVSPAKISCFNGLLHPTFCPFPSRVTFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVVVSFSLQYSALSAQIDSENIGPANIATELVLFPRQLPLIAQ
KFSECLTSAAIIDMLLIFGEYCMWSTEVLGHYWWSLSPKMVIALDEGKLPGAPFASRTSILSAQNHLADDEGKTVCFITKILQYSVNSIDIFVAIHMTYFSQYMNHSGAV
LAASEMLCNDGLQAFGLAAVAFAAGVLMRCLSCLTTCNVYFTEIIVICCDSKGNKSGYLLAIFSLISGSRLLRLPLRLRQLLLGFCILFSSQHLYNLCKFQQNVKRAELK
QKEMKELQKDQRGTIP