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Carg07982 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07982
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionzinc finger MYND domain-containing protein 15
Genome locationCarg_Chr04:1592851..1593851
RNA-Seq ExpressionCarg07982
SyntenyCarg07982
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR002893 - Zinc finger, MYND-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600140.1 Zinc finger MYND domain-containing protein 15, partial [Cucurbita argyrosperma subsp. sororia]1.1e-7098.41Show/hide
Query:  MECAGKGRGSRCIGPAIRRCGRCGAVAYCSADHQIKHWNDHKDECKRFEQQMKRIDALYEFPFTFSEEAVQLCQKQVSRCSFLSKRDIHKVGMWLYECPC
        MECAGKGRGSRCIGPAIRRCGRCGAV+YCSADHQIKHWNDHKDECKRFEQQMKRID LYEFPFTFSEEAVQLCQKQVSRCSFLSKRDIHKVGMWLYECPC
Subjt:  MECAGKGRGSRCIGPAIRRCGRCGAVAYCSADHQIKHWNDHKDECKRFEQQMKRIDALYEFPFTFSEEAVQLCQKQVSRCSFLSKRDIHKVGMWLYECPC

Query:  GEAATSYDYSRLNDSWVLPRISCPCS
        GEAATSYDYSRLNDSWVLPRISCPCS
Subjt:  GEAATSYDYSRLNDSWVLPRISCPCS

KAG7030807.1 hypothetical protein SDJN02_04844 [Cucurbita argyrosperma subsp. argyrosperma]3.8e-74100Show/hide
Query:  MECAGKGRGSRCIGPAIRRCGRCGAVAYCSADHQIKHWNDHKDECKRFEQQMKRIDALYEFPFTFSEEAVQLCQKQVSRCSFLSKRDIHKVGMWLYECPC
        MECAGKGRGSRCIGPAIRRCGRCGAVAYCSADHQIKHWNDHKDECKRFEQQMKRIDALYEFPFTFSEEAVQLCQKQVSRCSFLSKRDIHKVGMWLYECPC
Subjt:  MECAGKGRGSRCIGPAIRRCGRCGAVAYCSADHQIKHWNDHKDECKRFEQQMKRIDALYEFPFTFSEEAVQLCQKQVSRCSFLSKRDIHKVGMWLYECPC

Query:  GEAATSYDYSRLNDSWVLPRISCPCSGTSLS
        GEAATSYDYSRLNDSWVLPRISCPCSGTSLS
Subjt:  GEAATSYDYSRLNDSWVLPRISCPCSGTSLS

XP_022941605.1 zinc finger MYND domain-containing protein 15 [Cucurbita moschata]1.8e-71100Show/hide
Query:  MECAGKGRGSRCIGPAIRRCGRCGAVAYCSADHQIKHWNDHKDECKRFEQQMKRIDALYEFPFTFSEEAVQLCQKQVSRCSFLSKRDIHKVGMWLYECPC
        MECAGKGRGSRCIGPAIRRCGRCGAVAYCSADHQIKHWNDHKDECKRFEQQMKRIDALYEFPFTFSEEAVQLCQKQVSRCSFLSKRDIHKVGMWLYECPC
Subjt:  MECAGKGRGSRCIGPAIRRCGRCGAVAYCSADHQIKHWNDHKDECKRFEQQMKRIDALYEFPFTFSEEAVQLCQKQVSRCSFLSKRDIHKVGMWLYECPC

Query:  GEAATSYDYSRLNDSWVLPRISCPCS
        GEAATSYDYSRLNDSWVLPRISCPCS
Subjt:  GEAATSYDYSRLNDSWVLPRISCPCS

XP_022992181.1 zinc finger MYND domain-containing protein 15 [Cucurbita maxima]1.8e-71100Show/hide
Query:  MECAGKGRGSRCIGPAIRRCGRCGAVAYCSADHQIKHWNDHKDECKRFEQQMKRIDALYEFPFTFSEEAVQLCQKQVSRCSFLSKRDIHKVGMWLYECPC
        MECAGKGRGSRCIGPAIRRCGRCGAVAYCSADHQIKHWNDHKDECKRFEQQMKRIDALYEFPFTFSEEAVQLCQKQVSRCSFLSKRDIHKVGMWLYECPC
Subjt:  MECAGKGRGSRCIGPAIRRCGRCGAVAYCSADHQIKHWNDHKDECKRFEQQMKRIDALYEFPFTFSEEAVQLCQKQVSRCSFLSKRDIHKVGMWLYECPC

Query:  GEAATSYDYSRLNDSWVLPRISCPCS
        GEAATSYDYSRLNDSWVLPRISCPCS
Subjt:  GEAATSYDYSRLNDSWVLPRISCPCS

XP_023524466.1 zinc finger MYND domain-containing protein 15 [Cucurbita pepo subsp. pepo]1.9e-7098.41Show/hide
Query:  MECAGKGRGSRCIGPAIRRCGRCGAVAYCSADHQIKHWNDHKDECKRFEQQMKRIDALYEFPFTFSEEAVQLCQKQVSRCSFLSKRDIHKVGMWLYECPC
        MECAGKGRGSRCIGPAIRRCGRCGAVAYCSADHQIKHWNDHKDECKRFEQQMKRIDALYEFPFTFSEEAVQLCQKQVSRCSFLSKRDIHKVGMWLYECPC
Subjt:  MECAGKGRGSRCIGPAIRRCGRCGAVAYCSADHQIKHWNDHKDECKRFEQQMKRIDALYEFPFTFSEEAVQLCQKQVSRCSFLSKRDIHKVGMWLYECPC

Query:  GEAATSYDYSRLNDSWVLPRISCPCS
        GEAA+SYDYSRLND WVLPRISCPCS
Subjt:  GEAATSYDYSRLNDSWVLPRISCPCS

TrEMBL top hitse value%identityAlignment
A0A1S3BEM6 zinc finger MYND domain-containing protein 15 isoform X34.4e-6085.04Show/hide
Query:  MECAGKGRGSRCIGPAIRRCGRCGAVAYCSADHQIKHWNDHKDECKRFEQQMKRIDALYEFPFTFSEEA-VQLCQKQVSRCSFLSKRDIHKVGMWLYECP
        MECAGKGRG+RC G A RRCGRCG VAYCS DHQ+KHWNDHKDECKRFE QM+RIDAL EFPFTFSEEA VQLCQKQ SRCSFLSKR IHKVGMW YECP
Subjt:  MECAGKGRGSRCIGPAIRRCGRCGAVAYCSADHQIKHWNDHKDECKRFEQQMKRIDALYEFPFTFSEEA-VQLCQKQVSRCSFLSKRDIHKVGMWLYECP

Query:  CGEAATSYDYSRLNDSWVLPRISCPCS
        CGEAATSY++SRLND WVLPR+ CPCS
Subjt:  CGEAATSYDYSRLNDSWVLPRISCPCS

A0A1S3BFG9 zinc finger MYND domain-containing protein 15 isoform X14.4e-6085.04Show/hide
Query:  MECAGKGRGSRCIGPAIRRCGRCGAVAYCSADHQIKHWNDHKDECKRFEQQMKRIDALYEFPFTFSEEA-VQLCQKQVSRCSFLSKRDIHKVGMWLYECP
        MECAGKGRG+RC G A RRCGRCG VAYCS DHQ+KHWNDHKDECKRFE QM+RIDAL EFPFTFSEEA VQLCQKQ SRCSFLSKR IHKVGMW YECP
Subjt:  MECAGKGRGSRCIGPAIRRCGRCGAVAYCSADHQIKHWNDHKDECKRFEQQMKRIDALYEFPFTFSEEA-VQLCQKQVSRCSFLSKRDIHKVGMWLYECP

Query:  CGEAATSYDYSRLNDSWVLPRISCPCS
        CGEAATSY++SRLND WVLPR+ CPCS
Subjt:  CGEAATSYDYSRLNDSWVLPRISCPCS

A0A5D3CUK5 Zinc finger MYND domain-containing protein 15 isoform X14.4e-6085.04Show/hide
Query:  MECAGKGRGSRCIGPAIRRCGRCGAVAYCSADHQIKHWNDHKDECKRFEQQMKRIDALYEFPFTFSEEA-VQLCQKQVSRCSFLSKRDIHKVGMWLYECP
        MECAGKGRG+RC G A RRCGRCG VAYCS DHQ+KHWNDHKDECKRFE QM+RIDAL EFPFTFSEEA VQLCQKQ SRCSFLSKR IHKVGMW YECP
Subjt:  MECAGKGRGSRCIGPAIRRCGRCGAVAYCSADHQIKHWNDHKDECKRFEQQMKRIDALYEFPFTFSEEA-VQLCQKQVSRCSFLSKRDIHKVGMWLYECP

Query:  CGEAATSYDYSRLNDSWVLPRISCPCS
        CGEAATSY++SRLND WVLPR+ CPCS
Subjt:  CGEAATSYDYSRLNDSWVLPRISCPCS

A0A6J1FU55 zinc finger MYND domain-containing protein 158.5e-72100Show/hide
Query:  MECAGKGRGSRCIGPAIRRCGRCGAVAYCSADHQIKHWNDHKDECKRFEQQMKRIDALYEFPFTFSEEAVQLCQKQVSRCSFLSKRDIHKVGMWLYECPC
        MECAGKGRGSRCIGPAIRRCGRCGAVAYCSADHQIKHWNDHKDECKRFEQQMKRIDALYEFPFTFSEEAVQLCQKQVSRCSFLSKRDIHKVGMWLYECPC
Subjt:  MECAGKGRGSRCIGPAIRRCGRCGAVAYCSADHQIKHWNDHKDECKRFEQQMKRIDALYEFPFTFSEEAVQLCQKQVSRCSFLSKRDIHKVGMWLYECPC

Query:  GEAATSYDYSRLNDSWVLPRISCPCS
        GEAATSYDYSRLNDSWVLPRISCPCS
Subjt:  GEAATSYDYSRLNDSWVLPRISCPCS

A0A6J1JSV0 zinc finger MYND domain-containing protein 158.5e-72100Show/hide
Query:  MECAGKGRGSRCIGPAIRRCGRCGAVAYCSADHQIKHWNDHKDECKRFEQQMKRIDALYEFPFTFSEEAVQLCQKQVSRCSFLSKRDIHKVGMWLYECPC
        MECAGKGRGSRCIGPAIRRCGRCGAVAYCSADHQIKHWNDHKDECKRFEQQMKRIDALYEFPFTFSEEAVQLCQKQVSRCSFLSKRDIHKVGMWLYECPC
Subjt:  MECAGKGRGSRCIGPAIRRCGRCGAVAYCSADHQIKHWNDHKDECKRFEQQMKRIDALYEFPFTFSEEAVQLCQKQVSRCSFLSKRDIHKVGMWLYECPC

Query:  GEAATSYDYSRLNDSWVLPRISCPCS
        GEAATSYDYSRLNDSWVLPRISCPCS
Subjt:  GEAATSYDYSRLNDSWVLPRISCPCS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G70150.1 zinc ion binding2.4e-4257.81Show/hide
Query:  MECAGKGRGSRCIGPAIRRCGRCGAVAYCSADHQIKHWNDHKDECKRFEQQMKRIDALYEFPFTFSEEA-VQLCQKQVSRCSFLSKRDIHKVGMWLYECP
        MECA +G  +RC+GP  RRCG+CGAVAYCS  HQI HW+ HK+EC+R E+QM+R+D L +FPFTF+EEA +Q+ QK  +RCSF  KR +H+VGMW+YEC 
Subjt:  MECAGKGRGSRCIGPAIRRCGRCGAVAYCSADHQIKHWNDHKDECKRFEQQMKRIDALYEFPFTFSEEA-VQLCQKQVSRCSFLSKRDIHKVGMWLYECP

Query:  CGEAATSYDYSRLNDSWVLPRISCPCSG
        CG  A ++D   + + W LP  SCPC G
Subjt:  CGEAATSYDYSRLNDSWVLPRISCPCSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTGTGCCGGCAAGGGACGAGGAAGTCGTTGCATTGGCCCGGCGATTAGACGCTGTGGTCGCTGCGGAGCTGTTGCTTATTGTTCAGCCGATCACCAGATTAAACA
TTGGAATGATCATAAGGATGAATGCAAAAGGTTTGAGCAACAAATGAAGAGAATAGATGCCTTGTACGAGTTTCCTTTCACATTTTCCGAGGAGGCTGTTCAGTTGTGTC
AAAAGCAGGTGAGTAGGTGTTCATTCTTGAGCAAAAGGGACATCCACAAAGTCGGAATGTGGTTATACGAGTGTCCTTGTGGAGAAGCTGCTACATCCTATGATTACTCA
AGATTAAATGATAGTTGGGTTCTACCTAGAATCTCTTGTCCATGTAGTGGTACATCTCTCTCCTAG
mRNA sequenceShow/hide mRNA sequence
ATCTGGAACCGGGAAAAAATGGAGTGTGCCGGCAAGGGACGAGGAAGTCGTTGCATTGGCCCGGCGATTAGACGCTGTGGTCGCTGCGGAGCTGTTGCTTATTGTTCAGC
CGATCACCAGATTAAACATTGGAATGATCATAAGGATGAATGCAAAAGGTTTGAGCAACAAATGAAGAGAATAGATGCCTTGTACGAGTTTCCTTTCACATTTTCCGAGG
AGGCTGTTCAGTTGTGTCAAAAGCAGGTGAGTAGGTGTTCATTCTTGAGCAAAAGGGACATCCACAAAGTCGGAATGTGGTTATACGAGTGTCCTTGTGGAGAAGCTGCT
ACATCCTATGATTACTCAAGATTAAATGATAGTTGGGTTCTACCTAGAATCTCTTGTCCATGTAGTGGTACATCTCTCTCCTAG
Protein sequenceShow/hide protein sequence
MECAGKGRGSRCIGPAIRRCGRCGAVAYCSADHQIKHWNDHKDECKRFEQQMKRIDALYEFPFTFSEEAVQLCQKQVSRCSFLSKRDIHKVGMWLYECPCGEAATSYDYS
RLNDSWVLPRISCPCSGTSLS