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Carg07992 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07992
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:1633056..1634718
RNA-Seq ExpressionCarg07992
SyntenyCarg07992
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7819474.1 hypothetical protein G2W53_024929 [Senna tora]6.2e-0455.56Show/hide
Query:  VKGSDNELCIKSLSPVSQTSQNCSLQLGGSIASVPSPGALSFDPSFCASCQSTT
        V GS   L  + LSP+S TSQN   Q  GS A+VP+PG LSFDP+FC+  QS T
Subjt:  VKGSDNELCIKSLSPVSQTSQNCSLQLGGSIASVPSPGALSFDPSFCASCQSTT
KAG7030816.1 hypothetical protein SDJN02_04853, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-56100Show/hide
Query:  MICVQRSAHNVLLDCCAIRASWLISLLYRKVGAAISYFKYSGTLLNTIQIVLYSGFILGNPVKGSDNELCIKSLSPVSQTSQNCSLQLGGSIASVPSPGA
        MICVQRSAHNVLLDCCAIRASWLISLLYRKVGAAISYFKYSGTLLNTIQIVLYSGFILGNPVKGSDNELCIKSLSPVSQTSQNCSLQLGGSIASVPSPGA
Subjt:  MICVQRSAHNVLLDCCAIRASWLISLLYRKVGAAISYFKYSGTLLNTIQIVLYSGFILGNPVKGSDNELCIKSLSPVSQTSQNCSLQLGGSIASVPSPGA

Query:  LSFDPSFCASCQSTT
        LSFDPSFCASCQSTT
Subjt:  LSFDPSFCASCQSTT
PON44028.1 hypothetical protein PanWU01x14_269640, partial [Parasponia andersonii]2.8e-0447.95Show/hide
Query:  LLNTIQIVLYSGFILGNPVKGSDNELC-IKSLSPVSQTSQNCSLQLGGSIASVPSPGALSFDPSFCASCQSTT
        +L  + + L   F  G        +LC  +SLSPVS TSQN   Q GGS A VP PGA S DP+F +SCQS T
Subjt:  LLNTIQIVLYSGFILGNPVKGSDNELC-IKSLSPVSQTSQNCSLQLGGSIASVPSPGALSFDPSFCASCQSTT
TrEMBL top hitse value%identityAlignment
A0A0A9GGY0 Uncharacterized protein9.3e-0661.82Show/hide
Query:  PVKGSDNELCIKSLSPVSQTSQNCSLQLGGSIASVPSPGALSFDPSFCASCQSTT
        PV GS N L  KSL PVS TSQN   Q  GS   VP PGALS DP+F +SCQS T
Subjt:  PVKGSDNELCIKSLSPVSQTSQNCSLQLGGSIASVPSPGALSFDPSFCASCQSTT
A0A2P5B5H5 Uncharacterized protein (Fragment)1.3e-0447.95Show/hide
Query:  LLNTIQIVLYSGFILGNPVKGSDNELC-IKSLSPVSQTSQNCSLQLGGSIASVPSPGALSFDPSFCASCQSTT
        +L  + + L   F  G        +LC  +SLSPVS TSQN   Q GGS A VP PGA S DP+F +SCQS T
Subjt:  LLNTIQIVLYSGFILGNPVKGSDNELC-IKSLSPVSQTSQNCSLQLGGSIASVPSPGALSFDPSFCASCQSTT
A0A7J6H8Q5 Uncharacterized protein8.7e-0460.47Show/hide
Query:  PVKGSDNELCIKSLSPVSQTSQNCSLQLGGSIASVPSPGALSF
        PV GS      KSL+PVSQTSQNC  QLGGS+A+VP PG   +
Subjt:  PVKGSDNELCIKSLSPVSQTSQNCSLQLGGSIASVPSPGALSF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTGTGTACAGAGATCAGCACACAATGTACTACTTGATTGTTGTGCAATTAGAGCTAGTTGGCTAATCTCTCTTTTATACAGGAAAGTCGGAGCTGCCATTTCTTA
CTTCAAATACTCAGGTACATTGCTTAATACTATTCAGATAGTTCTCTACAGTGGCTTCATTCTTGGGAACCCTGTCAAAGGATCTGACAACGAACTCTGTATAAAATCTC
TCAGTCCAGTGTCCCAAACTTCACAGAACTGTAGCCTCCAATTGGGTGGTTCGATTGCCTCTGTCCCAAGCCCAGGTGCTCTATCCTTCGACCCTTCATTCTGTGCCTCT
TGCCAATCTACAACATAG
mRNA sequenceShow/hide mRNA sequence
ATGATCTGTGTACAGAGATCAGCACACAATGTACTACTTGATTGTTGTGCAATTAGAGCTAGTTGGCTAATCTCTCTTTTATACAGGAAAGTCGGAGCTGCCATTTCTTA
CTTCAAATACTCAGGTACATTGCTTAATACTATTCAGATAGTTCTCTACAGTGGCTTCATTCTTGGGAACCCTGTCAAAGGATCTGACAACGAACTCTGTATAAAATCTC
TCAGTCCAGTGTCCCAAACTTCACAGAACTGTAGCCTCCAATTGGGTGGTTCGATTGCCTCTGTCCCAAGCCCAGGTGCTCTATCCTTCGACCCTTCATTCTGTGCCTCT
TGCCAATCTACAACATAG
Protein sequenceShow/hide protein sequence
MICVQRSAHNVLLDCCAIRASWLISLLYRKVGAAISYFKYSGTLLNTIQIVLYSGFILGNPVKGSDNELCIKSLSPVSQTSQNCSLQLGGSIASVPSPGALSFDPSFCAS
CQSTT