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Carg08016 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08016
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAuxilin-related protein 2 isoform X2
Genome locationCarg_Chr04:1755301..1762042
RNA-Seq ExpressionCarg08016
SyntenyCarg08016
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600176.1 hypothetical protein SDJN03_05409, partial [Cucurbita argyrosperma subsp. sororia]2.4e-13599.2Show/hide
Query:  MAIDTTPFEFGGDGDGGRRCGKSCSRPSKYDVVGDIFFGKDDMKEYAWDGAFTEKTVRFIETVRRFSTVNVKRSSEPLSVTPAVSTCADFTQTIYFSRSH
        MAIDTTPFEFGGDGDGGRRCGKSCSRPSKYDVVGDIFFGKDDMKEYAWDGAFTEKTVRFIETVRRFSTVNVKRSSEPLSVTPAVST ADFTQTIYFSRSH
Subjt:  MAIDTTPFEFGGDGDGGRRCGKSCSRPSKYDVVGDIFFGKDDMKEYAWDGAFTEKTVRFIETVRRFSTVNVKRSSEPLSVTPAVSTCADFTQTIYFSRSH

Query:  TLIRHILILESERSINGLFPFECSLPKSNGSLPGNRRAESKEVSRLVSVMQIEVHCSHGSVIIILDSSFHSLSSSISSLCDEPMDNPDIQIYVLAEESRT
        TLIRHILILESERSINGLFPFECSLPKSNGSLPGNRRAESKEVSRLVSVMQIEVHCSHGSVIIILDSSFHSLSSSISSLCDEPMDNPDIQIYVLAEESRT
Subjt:  TLIRHILILESERSINGLFPFECSLPKSNGSLPGNRRAESKEVSRLVSVMQIEVHCSHGSVIIILDSSFHSLSSSISSLCDEPMDNPDIQIYVLAEESRT

Query:  TNSYVIEFCSDNREGKNKAVVLDEVIAWATEKQFVLSLRLVGFSHLLGILL
        TNSYVIEFCSDNREGKNKAVVLDEVIAWATEKQFVLSLRLVGFSHLLGIL+
Subjt:  TNSYVIEFCSDNREGKNKAVVLDEVIAWATEKQFVLSLRLVGFSHLLGILL

KAG6600177.1 hypothetical protein SDJN03_05410, partial [Cucurbita argyrosperma subsp. sororia]1.9e-2382.67Show/hide
Query:  VLSLRLVGFSHLLGILLLVCFALLLIASPISAMDNTPRIRKMGMEYKLVGKAVVVAKPVRQLSADSPWGGGYHIP
        ++SL+++ F     + LLVCFALLLIASPISAMDNTPRIRKMGMEYKLVGKAVVVAKPVRQLSADSPWGGGYHIP
Subjt:  VLSLRLVGFSHLLGILLLVCFALLLIASPISAMDNTPRIRKMGMEYKLVGKAVVVAKPVRQLSADSPWGGGYHIP

KAG7011932.1 hypothetical protein SDJN02_26840, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-2072.5Show/hide
Query:  SSISSLCDEPMDNPDIQIYVLAEESRTTNSYVIEFCSDNREGKNKAVVLDEVIAWATEKQFVLSLRLVGFSHLLGILLLV
        S ++     P D PDI+IYVLAEESRT NSYV E CS NREGKN AV LDEVIAW TEKQ VLSLR VGFSHLLGIL+ V
Subjt:  SSISSLCDEPMDNPDIQIYVLAEESRTTNSYVIEFCSDNREGKNKAVVLDEVIAWATEKQFVLSLRLVGFSHLLGILLLV

KAG7015246.1 hypothetical protein SDJN02_22880, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-1780.95Show/hide
Query:  DSSFHSLSSSISSLCDEPMDNPDIQIYVLAEESRTTNSYVIEFCSDNREGKNKAVVLDEVIAW
        DSSFHS SSSISSLC+EP + PDIQIYVLAEE RT NSYVI   SDNR GKNKAV LDEVIAW
Subjt:  DSSFHSLSSSISSLCDEPMDNPDIQIYVLAEESRTTNSYVIEFCSDNREGKNKAVVLDEVIAW

KAG7030840.1 hypothetical protein SDJN02_04877, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-171100Show/hide
Query:  MAIDTTPFEFGGDGDGGRRCGKSCSRPSKYDVVGDIFFGKDDMKEYAWDGAFTEKTVRFIETVRRFSTVNVKRSSEPLSVTPAVSTCADFTQTIYFSRSH
        MAIDTTPFEFGGDGDGGRRCGKSCSRPSKYDVVGDIFFGKDDMKEYAWDGAFTEKTVRFIETVRRFSTVNVKRSSEPLSVTPAVSTCADFTQTIYFSRSH
Subjt:  MAIDTTPFEFGGDGDGGRRCGKSCSRPSKYDVVGDIFFGKDDMKEYAWDGAFTEKTVRFIETVRRFSTVNVKRSSEPLSVTPAVSTCADFTQTIYFSRSH

Query:  TLIRHILILESERSINGLFPFECSLPKSNGSLPGNRRAESKEVSRLVSVMQIEVHCSHGSVIIILDSSFHSLSSSISSLCDEPMDNPDIQIYVLAEESRT
        TLIRHILILESERSINGLFPFECSLPKSNGSLPGNRRAESKEVSRLVSVMQIEVHCSHGSVIIILDSSFHSLSSSISSLCDEPMDNPDIQIYVLAEESRT
Subjt:  TLIRHILILESERSINGLFPFECSLPKSNGSLPGNRRAESKEVSRLVSVMQIEVHCSHGSVIIILDSSFHSLSSSISSLCDEPMDNPDIQIYVLAEESRT

Query:  TNSYVIEFCSDNREGKNKAVVLDEVIAWATEKQFVLSLRLVGFSHLLGILLLVCFALLLIASPISAMDNTPRIRKMGMEYKLVGKAVVVAKPVRQLSADS
        TNSYVIEFCSDNREGKNKAVVLDEVIAWATEKQFVLSLRLVGFSHLLGILLLVCFALLLIASPISAMDNTPRIRKMGMEYKLVGKAVVVAKPVRQLSADS
Subjt:  TNSYVIEFCSDNREGKNKAVVLDEVIAWATEKQFVLSLRLVGFSHLLGILLLVCFALLLIASPISAMDNTPRIRKMGMEYKLVGKAVVVAKPVRQLSADS

Query:  PWGGGYHIP
        PWGGGYHIP
Subjt:  PWGGGYHIP

TrEMBL top hitse value%identityAlignment
A0A0A0KKR1 Uncharacterized protein2.6e-1046.46Show/hide
Query:  FPFECSLPKSNGSLPGNRRAESKEVSRLVSVMQIEVHCSHGSVIIILDSSFHSL------------SSSISSLCDEPMDNPDIQIYVLAEE-SRTTNSYV
        FPF  S P  N  +      E KE  R  S      H S    I I  +S+ S+            SS+ISSLC     NPDIQI VLAEE     +SYV
Subjt:  FPFECSLPKSNGSLPGNRRAESKEVSRLVSVMQIEVHCSHGSVIIILDSSFHSL------------SSSISSLCDEPMDNPDIQIYVLAEE-SRTTNSYV

Query:  IEFCSDNREGKNKAVVLDEVIAWATEK
        IE  SDNREG N+AV LDEVIAWA EK
Subjt:  IEFCSDNREGKNKAVVLDEVIAWATEK

A0A5A7UBI6 Auxilin-related protein 2 isoform X22.6e-1046.46Show/hide
Query:  FPFECSLPKSNGSLPGNRRAESKEVSRLVSVMQIEVHCSHGSVIIILDSSFHSL------------SSSISSLCDEPMDNPDIQIYVLAEE-SRTTNSYV
        FPF  S P  N  +      E KE  R  S      H S    I I  +S+ S+            SS+ISSLC     NPDIQI VLAEE     +SYV
Subjt:  FPFECSLPKSNGSLPGNRRAESKEVSRLVSVMQIEVHCSHGSVIIILDSSFHSL------------SSSISSLCDEPMDNPDIQIYVLAEE-SRTTNSYV

Query:  IEFCSDNREGKNKAVVLDEVIAWATEK
        IE  SDNREG N+AV LDEVIAWA EK
Subjt:  IEFCSDNREGKNKAVVLDEVIAWATEK

A0A5D3CNX7 Auxilin-related protein 2 isoform X22.6e-1046.46Show/hide
Query:  FPFECSLPKSNGSLPGNRRAESKEVSRLVSVMQIEVHCSHGSVIIILDSSFHSL------------SSSISSLCDEPMDNPDIQIYVLAEE-SRTTNSYV
        FPF  S P  N  +      E KE  R  S      H S    I I  +S+ S+            SS+ISSLC     NPDIQI VLAEE     +SYV
Subjt:  FPFECSLPKSNGSLPGNRRAESKEVSRLVSVMQIEVHCSHGSVIIILDSSFHSL------------SSSISSLCDEPMDNPDIQIYVLAEE-SRTTNSYV

Query:  IEFCSDNREGKNKAVVLDEVIAWATEK
        IE  SDNREG N+AV LDEVIAWA EK
Subjt:  IEFCSDNREGKNKAVVLDEVIAWATEK

A0A6J1IL14 uncharacterized protein LOC111478006 isoform X11.4e-1639.11Show/hide
Query:  VKRSSEPLSVTPAVSTCADFTQTIYF-SRSHTLIRHILILESERSINGLFPFECSLPKSNGSLPGNRRAESKEVSRLVSVMQIEVHCSHGSVIIILDSSF
        VKRSSEPL    A      FT  IY    SH+L++HIL L SE SINGLF FECSLPK        R++E +          + ++    S  ++  +  
Subjt:  VKRSSEPLSVTPAVSTCADFTQTIYF-SRSHTLIRHILILESERSINGLFPFECSLPKSNGSLPGNRRAESKEVSRLVSVMQIEVHCSHGSVIIILDSSF

Query:  HSLSSSISSL----CDEPMDNPD--------------------------IQIYVLAEESRTTNSYVIEFCSDNREGKNKAVVLDEVIAWATEKQFVLSLR
             SI+ L    C  P  N                            + +    EE +TTNS VIE  +DN EGKN+ V LDEVIAWA EKQFVLSLR
Subjt:  HSLSSSISSL----CDEPMDNPD--------------------------IQIYVLAEESRTTNSYVIEFCSDNREGKNKAVVLDEVIAWATEKQFVLSLR

Query:  LV
        LV
Subjt:  LV

A0A6J1ING1 uncharacterized protein LOC111478006 isoform X23.7e-1738.65Show/hide
Query:  VKRSSEPLSVTPAVSTCADFTQTIYF-SRSHTLIRHILILESERSINGLFPFECSLPKSNGSLPGNRRAESKEVSRLVSVMQIEVHCSHGSVIIILDSSF
        VKRSSEPL    A      FT  IY    SH+L++HIL L SE SINGLF FECSLPK        R++E +          + ++    S  ++  +  
Subjt:  VKRSSEPLSVTPAVSTCADFTQTIYF-SRSHTLIRHILILESERSINGLFPFECSLPKSNGSLPGNRRAESKEVSRLVSVMQIEVHCSHGSVIIILDSSF

Query:  HSLSSSISSL----CDEPMDNPD--------------------------IQIYVLAEESRTTNSYVIEFCSDNREGKNKAVVLDEVIAWATEKQFVLSLR
             SI+ L    C  P  N                            + +    EE +TTNS VIE  +DN EGKN+ V LDEVIAWA EKQFVLSLR
Subjt:  HSLSSSISSL----CDEPMDNPD--------------------------IQIYVLAEESRTTNSYVIEFCSDNREGKNKAVVLDEVIAWATEKQFVLSLR

Query:  LVGFSHL
        L G  H+
Subjt:  LVGFSHL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATCGATACCACTCCCTTCGAATTCGGCGGCGACGGTGACGGCGGCCGTCGATGCGGCAAGTCTTGCAGCAGACCTTCTAAGTACGACGTCGTCGGAGACATCTT
CTTCGGTAAGGATGATATGAAGGAATACGCATGGGATGGAGCTTTCACTGAGAAAACGGTTCGATTCATTGAAACCGTTCGACGGTTTTCCACGGTCAACGTCAAACGGT
CTTCAGAGCCGTTATCCGTCACGCCAGCTGTCTCGACCTGCGCGGATTTTACACAGACTATATATTTCTCCCGCAGTCACACTCTTATTCGGCACATTCTCATACTAGAA
TCAGAGCGCTCCATCAATGGCCTCTTCCCTTTTGAGTGTTCGTTGCCGAAATCAAACGGATCATTACCAGGCAATCGGAGAGCAGAATCGAAAGAAGTATCTCGCCTCGT
CTCGGTGATGCAAATAGAGGTTCATTGCTCCCATGGTAGCGTGATTATTATCTTGGACTCCTCGTTTCATTCCCTGTCATCTTCTATCTCTTCTCTGTGTGATGAGCCAA
TGGACAATCCTGATATTCAAATTTATGTATTGGCAGAAGAGAGCAGGACGACGAACTCTTATGTCATCGAGTTTTGTTCCGATAACAGAGAGGGGAAGAACAAGGCAGTT
GTTCTTGATGAAGTGATTGCTTGGGCAACAGAAAAGCAGTTCGTCTTGTCATTGAGGCTGGTTGGATTTTCGCATCTGCTAGGAATACTGCTCCTAGTTTGCTTTGCATT
GCTTCTGATTGCCTCGCCCATTTCTGCAATGGACAATACTCCTCGTATTCGTAAGATGGGGATGGAGTACAAGCTTGTTGGAAAGGCTGTGGTGGTAGCAAAACCAGTGA
GACAATTGTCTGCTGATTCCCCATGGGGTGGTGGTTATCACATCCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCATCGATACCACTCCCTTCGAATTCGGCGGCGACGGTGACGGCGGCCGTCGATGCGGCAAGTCTTGCAGCAGACCTTCTAAGTACGACGTCGTCGGAGACATCTT
CTTCGGTAAGGATGATATGAAGGAATACGCATGGGATGGAGCTTTCACTGAGAAAACGGTTCGATTCATTGAAACCGTTCGACGGTTTTCCACGGTCAACGTCAAACGGT
CTTCAGAGCCGTTATCCGTCACGCCAGCTGTCTCGACCTGCGCGGATTTTACACAGACTATATATTTCTCCCGCAGTCACACTCTTATTCGGCACATTCTCATACTAGAA
TCAGAGCGCTCCATCAATGGCCTCTTCCCTTTTGAGTGTTCGTTGCCGAAATCAAACGGATCATTACCAGGCAATCGGAGAGCAGAATCGAAAGAAGTATCTCGCCTCGT
CTCGGTGATGCAAATAGAGGTTCATTGCTCCCATGGTAGCGTGATTATTATCTTGGACTCCTCGTTTCATTCCCTGTCATCTTCTATCTCTTCTCTGTGTGATGAGCCAA
TGGACAATCCTGATATTCAAATTTATGTATTGGCAGAAGAGAGCAGGACGACGAACTCTTATGTCATCGAGTTTTGTTCCGATAACAGAGAGGGGAAGAACAAGGCAGTT
GTTCTTGATGAAGTGATTGCTTGGGCAACAGAAAAGCAGTTCGTCTTGTCATTGAGGCTGGTTGGATTTTCGCATCTGCTAGGAATACTGCTCCTAGTTTGCTTTGCATT
GCTTCTGATTGCCTCGCCCATTTCTGCAATGGACAATACTCCTCGTATTCGTAAGATGGGGATGGAGTACAAGCTTGTTGGAAAGGCTGTGGTGGTAGCAAAACCAGTGA
GACAATTGTCTGCTGATTCCCCATGGGGTGGTGGTTATCACATCCCTTAG
Protein sequenceShow/hide protein sequence
MAIDTTPFEFGGDGDGGRRCGKSCSRPSKYDVVGDIFFGKDDMKEYAWDGAFTEKTVRFIETVRRFSTVNVKRSSEPLSVTPAVSTCADFTQTIYFSRSHTLIRHILILE
SERSINGLFPFECSLPKSNGSLPGNRRAESKEVSRLVSVMQIEVHCSHGSVIIILDSSFHSLSSSISSLCDEPMDNPDIQIYVLAEESRTTNSYVIEFCSDNREGKNKAV
VLDEVIAWATEKQFVLSLRLVGFSHLLGILLLVCFALLLIASPISAMDNTPRIRKMGMEYKLVGKAVVVAKPVRQLSADSPWGGGYHIP