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Carg08017 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08017
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:1762968..1763656
RNA-Seq ExpressionCarg08017
SyntenyCarg08017
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576804.1 hypothetical protein SDJN03_24378, partial [Cucurbita argyrosperma subsp. sororia]6.2e-1661.73Show/hide
Query:  MASPSAFVPWKEVVFFALLLLAFNVSARELVGTNIVARTVHEMTIETN---VGRRLIARQLDTSWGGNYSPPPPRRRPPPP
        MASP+A V WK+V F   LL+A +VSAREL G N+V RT  EM    N    G RLIARQLDT+W G+YSPPPPR  PPPP
Subjt:  MASPSAFVPWKEVVFFALLLLAFNVSARELVGTNIVARTVHEMTIETN---VGRRLIARQLDTSWGGNYSPPPPRRRPPPP
KAG6600178.1 hypothetical protein SDJN03_05411, partial [Cucurbita argyrosperma subsp. sororia]6.3e-4598.04Show/hide
Query:  MASPSAFVPWKEVVFFALLLLAFNVSARELVGTNIVARTVHEMTIETNVGRRLIARQLDTSWGGNYSPPPPRR-RPPPPPCRYTPRPSLPRSRPGSRPLP
        MASPSAFVPWKEVVFFALLLLAFNVSARELVGTNIVARTVHEMTIETNVGRRLIARQLDTSWGGNYSPPPPRR  PPPPPCRYTPRPSLPRSRPGSRPLP
Subjt:  MASPSAFVPWKEVVFFALLLLAFNVSARELVGTNIVARTVHEMTIETNVGRRLIARQLDTSWGGNYSPPPPRR-RPPPPPCRYTPRPSLPRSRPGSRPLP

Query:  PR
        PR
Subjt:  PR
KAG7014831.1 hypothetical protein SDJN02_22460, partial [Cucurbita argyrosperma subsp. argyrosperma]9.5e-1762.96Show/hide
Query:  MASPSAFVPWKEVVFFALLLLAFNVSARELVGTNIVARTVHEMTIETN---VGRRLIARQLDTSWGGNYSPPPPRRRPPPP
        MASP+A V WK+V F   LL+A +VSAREL G N+V RT  EM    N   VG RLIARQLDT+W G+YSPPPPR  PPPP
Subjt:  MASPSAFVPWKEVVFFALLLLAFNVSARELVGTNIVARTVHEMTIETN---VGRRLIARQLDTSWGGNYSPPPPRRRPPPP
KAG7030841.1 hypothetical protein SDJN02_04878 [Cucurbita argyrosperma subsp. argyrosperma]4.0e-47100Show/hide
Query:  MASPSAFVPWKEVVFFALLLLAFNVSARELVGTNIVARTVHEMTIETNVGRRLIARQLDTSWGGNYSPPPPRRRPPPPPCRYTPRPSLPRSRPGSRPLPP
        MASPSAFVPWKEVVFFALLLLAFNVSARELVGTNIVARTVHEMTIETNVGRRLIARQLDTSWGGNYSPPPPRRRPPPPPCRYTPRPSLPRSRPGSRPLPP
Subjt:  MASPSAFVPWKEVVFFALLLLAFNVSARELVGTNIVARTVHEMTIETNVGRRLIARQLDTSWGGNYSPPPPRRRPPPPPCRYTPRPSLPRSRPGSRPLPP

Query:  R
        R
Subjt:  R
KGN57261.1 hypothetical protein Csa_010292 [Cucumis sativus]3.5e-1159.52Show/hide
Query:  VVFFALLLLAFNVSARELVGTNIVARTVHEM-TIETN--VGRRLIARQLDTSWGGNYSPPPPRRRPPPPPCRYTPRPSLPRSRP
        +VFF+LLLLAFN S      T ++AR   EM  +ETN  +GR+L ARQLDTSW GNYSPPPP R PPPPP R  PRP     RP
Subjt:  VVFFALLLLAFNVSARELVGTNIVARTVHEM-TIETN--VGRRLIARQLDTSWGGNYSPPPPRRRPPPPPCRYTPRPSLPRSRP
TrEMBL top hitse value%identityAlignment
A0A0A0L5K7 Uncharacterized protein1.1e-0757.89Show/hide
Query:  AFVPWKEV-VFFALLLLAFNVSARELVGTNIVARTVHE--MTIETN--VGRRLIARQLDTSWGGNYSPPPPRRRPP
        A V WK+V +FF LLLLA+N+SAREL     VART  E  +T E N  + RRL  RQLDTSW GNY PPP   +PP
Subjt:  AFVPWKEV-VFFALLLLAFNVSARELVGTNIVARTVHE--MTIETN--VGRRLIARQLDTSWGGNYSPPPPRRRPP
A0A0A0LB11 Uncharacterized protein1.7e-1159.52Show/hide
Query:  VVFFALLLLAFNVSARELVGTNIVARTVHEM-TIETN--VGRRLIARQLDTSWGGNYSPPPPRRRPPPPPCRYTPRPSLPRSRP
        +VFF+LLLLAFN S      T ++AR   EM  +ETN  +GR+L ARQLDTSW GNYSPPPP R PPPPP R  PRP     RP
Subjt:  VVFFALLLLAFNVSARELVGTNIVARTVHEM-TIETN--VGRRLIARQLDTSWGGNYSPPPPRRRPPPPPCRYTPRPSLPRSRP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCCCAAGCGCCTTTGTTCCTTGGAAGGAGGTAGTCTTCTTCGCTTTGCTTCTTCTGGCTTTCAACGTTTCCGCTAGGGAACTTGTTGGAACCAACATTGTGGC
TCGCACTGTCCATGAGATGACAATAGAGACGAATGTGGGCAGGAGATTGATTGCAAGACAGTTGGATACCTCTTGGGGAGGAAATTATTCTCCTCCTCCCCCTCGTCGTC
GTCCTCCTCCGCCTCCTTGTCGTTATACTCCTCGTCCTTCTCTTCCTCGTTCTCGTCCCGGTTCCCGTCCTCTTCCTCCACGCTGA
mRNA sequenceShow/hide mRNA sequence
TCTCTAAACCCATTCAAGTTTTGAGCTTTATTTCCTCTGCAACCAGAAATTAATGGCTTCCCCAAGCGCCTTTGTTCCTTGGAAGGAGGTAGTCTTCTTCGCTTTGCTTC
TTCTGGCTTTCAACGTTTCCGCTAGGGAACTTGTTGGAACCAACATTGTGGCTCGCACTGTCCATGAGATGACAATAGAGACGAATGTGGGCAGGAGATTGATTGCAAGA
CAGTTGGATACCTCTTGGGGAGGAAATTATTCTCCTCCTCCCCCTCGTCGTCGTCCTCCTCCGCCTCCTTGTCGTTATACTCCTCGTCCTTCTCTTCCTCGTTCTCGTCC
CGGTTCCCGTCCTCTTCCTCCACGCTGATCCTCCAAGGGAAAAAATTTGAATTGTTTGTGTGTTTTATCTTTAATTCCCTTTGTTTTAGCATGTTTAGATTTGGAGGATA
AGGATATTTATTTGGAGGATAAGGATATTTACAAGTAAAGTCCTATGAACTTTCTTTTTTCTTTAATGGTGTTGTGTGATTTTGGTCAAGCCATAGGCGCAAGCCCTCTG
GAGTTAATGACTCATATCTTTCTAAACAATGTTAGTTCAATTATGAGAGCTCAAACTTTATAGAGT
Protein sequenceShow/hide protein sequence
MASPSAFVPWKEVVFFALLLLAFNVSARELVGTNIVARTVHEMTIETNVGRRLIARQLDTSWGGNYSPPPPRRRPPPPPCRYTPRPSLPRSRPGSRPLPPR