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Carg08042 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08042
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGTP-binding protein YPTM2-like isoform X2
Genome locationCarg_Chr04:1928021..1929570
RNA-Seq ExpressionCarg08042
SyntenyCarg08042
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600205.1 hypothetical protein SDJN03_05438, partial [Cucurbita argyrosperma subsp. sororia]6.7e-110100Show/hide
Query:  MCSAFSQVIHQTDLFQFTSRFFLLRLHFLPAVSCIQRAPSHISVSLLRLSASPFPSHLIAKQNLKETEKMHRSVSWNRFSDEYYSSSSPSPALSSTPGQA
        MCSAFSQVIHQTDLFQFTSRFFLLRLHFLPAVSCIQRAPSHISVSLLRLSASPFPSHLIAKQNLKETEKMHRSVSWNRFSDEYYSSSSPSPALSSTPGQA
Subjt:  MCSAFSQVIHQTDLFQFTSRFFLLRLHFLPAVSCIQRAPSHISVSLLRLSASPFPSHLIAKQNLKETEKMHRSVSWNRFSDEYYSSSSPSPALSSTPGQA

Query:  LRLSFDGNEQPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAARIEGLNVEGEIEREFGGAQNEALPILDSTPSTL
        LRLSFDGNEQPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAARIEGLNVEGEIEREFGGAQNEALPILDSTPSTL
Subjt:  LRLSFDGNEQPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAARIEGLNVEGEIEREFGGAQNEALPILDSTPSTL

Query:  KIKRLH
        KIKRLH
Subjt:  KIKRLH

KAG7030866.1 hypothetical protein SDJN02_04903, partial [Cucurbita argyrosperma subsp. argyrosperma]6.7e-110100Show/hide
Query:  MCSAFSQVIHQTDLFQFTSRFFLLRLHFLPAVSCIQRAPSHISVSLLRLSASPFPSHLIAKQNLKETEKMHRSVSWNRFSDEYYSSSSPSPALSSTPGQA
        MCSAFSQVIHQTDLFQFTSRFFLLRLHFLPAVSCIQRAPSHISVSLLRLSASPFPSHLIAKQNLKETEKMHRSVSWNRFSDEYYSSSSPSPALSSTPGQA
Subjt:  MCSAFSQVIHQTDLFQFTSRFFLLRLHFLPAVSCIQRAPSHISVSLLRLSASPFPSHLIAKQNLKETEKMHRSVSWNRFSDEYYSSSSPSPALSSTPGQA

Query:  LRLSFDGNEQPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAARIEGLNVEGEIEREFGGAQNEALPILDSTPSTL
        LRLSFDGNEQPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAARIEGLNVEGEIEREFGGAQNEALPILDSTPSTL
Subjt:  LRLSFDGNEQPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAARIEGLNVEGEIEREFGGAQNEALPILDSTPSTL

Query:  KIKRLH
        KIKRLH
Subjt:  KIKRLH

XP_022942780.1 uncharacterized protein LOC111447711 [Cucurbita moschata]2.9e-6897.81Show/hide
Query:  MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLSFDGNEQPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAARI
        MHRSVSWNRFSDEYYSSSSP PALSSTPGQALRLSFDGNEQPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEID GMRWDPMAA I
Subjt:  MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLSFDGNEQPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAARI

Query:  EGLNVEGEIEREFGGAQNEALPILDSTPSTLKIKRLH
        EGLNVEGEIEREFGGAQNEALPILDSTPSTLKIKRLH
Subjt:  EGLNVEGEIEREFGGAQNEALPILDSTPSTLKIKRLH

XP_022986879.1 uncharacterized protein LOC111484483 [Cucurbita maxima]1.9e-6494.24Show/hide
Query:  MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRL--SFDGNEQPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAA
        MHRSVSWNRFSDEYYSSSSPSPALSSTP QALRL  SFDGNEQPTSYPA+E+VKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEID GMR DPMAA
Subjt:  MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRL--SFDGNEQPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAA

Query:  RIEGLNVEGEIEREFGGAQNEALPILDSTPSTLKIKRLH
        RIEGLNVEGEIEREFGGAQNEALPILDSTPSTLKIKRL+
Subjt:  RIEGLNVEGEIEREFGGAQNEALPILDSTPSTLKIKRLH

XP_023512832.1 uncharacterized protein LOC111777447 [Cucurbita pepo subsp. pepo]1.9e-7295.45Show/hide
Query:  MCSAFSQVIHQTDLFQFTSRFFLLRLHFLPAVSCIQRAPSHISVSLLRLSASPFPSHLIAKQNLKETEKMHRSVSWNRFSDEYYSSSSPSPALSSTPGQA
        MCSAFSQVIHQTDLFQFTSRFFLLRLHFLP VSCIQRAPSHISVSLLRLS S F SHLIAK NLKETEKMHRSVSWNRFSDEYYSSSSPSPALSSTPGQA
Subjt:  MCSAFSQVIHQTDLFQFTSRFFLLRLHFLPAVSCIQRAPSHISVSLLRLSASPFPSHLIAKQNLKETEKMHRSVSWNRFSDEYYSSSSPSPALSSTPGQA

Query:  LRLSFDGNEQPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNP
        LRLSFDGNEQPTSYPADE+VKREKAR KFAATAVHVIPLVLVLCAILLWFFSNP
Subjt:  LRLSFDGNEQPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNP

TrEMBL top hitse value%identityAlignment
A0A0B2RE95 Uncharacterized protein6.9e-2856.59Show/hide
Query:  MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLS---FDGNEQPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMA
        MHRS SWNRFSD+Y+       A +S+P    R S   FDGN  PT  P  E+ KRE+ARVKFA  AVHVIPLVL++CAI+LW FSNP  D G+  DP+ 
Subjt:  MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLS---FDGNEQPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMA

Query:  ARIEGLNVEGEIEREFGGAQNEALPILDS
        ARIEGL++EGEIE +  G Q   LPI+ S
Subjt:  ARIEGLNVEGEIEREFGGAQNEALPILDS

A0A6J1CG79 uncharacterized protein LOC111011394 isoform X16.3e-3765.71Show/hide
Query:  MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRL--SFDGNEQPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAA
        M+RSVSWNRFSDEYYS SSP+  LSS P QAL L  SF  NE PT+ P   +VKREKARVKFA TAVHVIPLVL+LCAI+LWFFSNPEID GMR + +AA
Subjt:  MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRL--SFDGNEQPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAA

Query:  RIEGLNVEGEIERE---FGGAQNEALPILDSTPSTLKIKR
        RIEGL +EGE+E E      A +     LD   S LKIKR
Subjt:  RIEGLNVEGEIERE---FGGAQNEALPILDSTPSTLKIKR

A0A6J1FWX5 uncharacterized protein LOC1114477111.4e-6897.81Show/hide
Query:  MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLSFDGNEQPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAARI
        MHRSVSWNRFSDEYYSSSSP PALSSTPGQALRLSFDGNEQPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEID GMRWDPMAA I
Subjt:  MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLSFDGNEQPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAARI

Query:  EGLNVEGEIEREFGGAQNEALPILDSTPSTLKIKRLH
        EGLNVEGEIEREFGGAQNEALPILDSTPSTLKIKRLH
Subjt:  EGLNVEGEIEREFGGAQNEALPILDSTPSTLKIKRLH

A0A6J1JHB4 uncharacterized protein LOC1114844839.3e-6594.24Show/hide
Query:  MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRL--SFDGNEQPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAA
        MHRSVSWNRFSDEYYSSSSPSPALSSTP QALRL  SFDGNEQPTSYPA+E+VKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEID GMR DPMAA
Subjt:  MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRL--SFDGNEQPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAA

Query:  RIEGLNVEGEIEREFGGAQNEALPILDSTPSTLKIKRLH
        RIEGLNVEGEIEREFGGAQNEALPILDSTPSTLKIKRL+
Subjt:  RIEGLNVEGEIEREFGGAQNEALPILDSTPSTLKIKRLH

A0A6P5T8H7 uncharacterized protein LOC1107647795.3e-2855.04Show/hide
Query:  MHRSVSWNRFSDEYYSSSSPSPALSSTP-GQALRLSFD--GNEQPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMA
        MHRS SW+R +DEY+   + SP+    P G  + +SFD  G++ P   P  E+ K+E++RVKFA  AVHVIP+VL+LCA +LWFFSNPEID  ++ DP+A
Subjt:  MHRSVSWNRFSDEYYSSSSPSPALSSTP-GQALRLSFD--GNEQPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMA

Query:  ARIEGLNVEGEIEREFGGAQNEALPILDS
        ARIEGL +EGEIE +  G Q   LPILDS
Subjt:  ARIEGLNVEGEIEREFGGAQNEALPILDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G35658.1 unknown protein7.9e-0838.71Show/hide
Query:  MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLSFDGNE--------QPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNP
        M RS S +  SD+  S++SPSP+ S      ++ S D ++         P S+P     K+ K+R + A  A+H IP+VL+LCA++LW FSNP
Subjt:  MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLSFDGNE--------QPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNP

AT2G35658.2 unknown protein7.9e-0838.71Show/hide
Query:  MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLSFDGNE--------QPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNP
        M RS S +  SD+  S++SPSP+ S      ++ S D ++         P S+P     K+ K+R + A  A+H IP+VL+LCA++LW FSNP
Subjt:  MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLSFDGNE--------QPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNP

AT2G35658.3 unknown protein7.9e-0838.71Show/hide
Query:  MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLSFDGNE--------QPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNP
        M RS S +  SD+  S++SPSP+ S      ++ S D ++         P S+P     K+ K+R + A  A+H IP+VL+LCA++LW FSNP
Subjt:  MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLSFDGNE--------QPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNP

AT5G07490.1 unknown protein1.1e-2243.8Show/hide
Query:  MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLSFDGNEQPTSYPAD----EIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPM
        M+RS SWNR +++Y           S P  A +  + G ++    P D    E+ K+EK+R KFA  AVH+IP VL+ CA++LWFFSNP++D G++ D +
Subjt:  MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLSFDGNEQPTSYPAD----EIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPM

Query:  AARIEGLNVEGEIEREFGGAQ
        AARIEGL +EG+I+ +  G Q
Subjt:  AARIEGLNVEGEIEREFGGAQ

AT5G61630.1 unknown protein1.0e-2345.76Show/hide
Query:  MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLSFDGNEQPT-SYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAAR
        M+RS SWNR  ++Y S+      + S  G       D NE P+ + P +E+VK+EK+R KFA  A+H+IP VL+ CA++LW FSNP++D GMR + +AA+
Subjt:  MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLSFDGNEQPT-SYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAAR

Query:  IEGLNVEGEIEREFGGAQ
        IEGL +EG+I+ +  G Q
Subjt:  IEGLNVEGEIEREFGGAQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCTCGGCCTTCAGTCAGGTCATTCATCAAACAGATTTGTTCCAATTCACAAGCCGATTCTTCTTGCTTCGGCTACATTTTCTCCCTGCCGTTTCCTGCATACAACG
CGCACCATCACACATTTCAGTCTCGCTTCTCCGCCTCTCCGCCTCTCCATTTCCTTCTCATCTCATCGCGAAACAGAACTTGAAAGAAACAGAAAAAATGCACCGATCGG
TGAGCTGGAACCGATTCTCCGATGAATACTACTCGTCCTCCTCCCCGTCGCCGGCGCTGTCATCGACTCCAGGCCAGGCGTTGCGATTATCATTTGACGGAAATGAGCAG
CCGACGAGTTATCCAGCGGATGAGATAGTGAAGCGAGAGAAGGCGCGAGTCAAGTTCGCCGCAACTGCTGTTCATGTGATTCCTCTCGTTTTGGTTCTCTGCGCCATTCT
TCTGTGGTTCTTCTCCAATCCAGAAATAGATGCGGGGATGAGATGGGATCCAATGGCAGCAAGAATTGAAGGATTGAACGTTGAGGGGGAAATTGAGAGGGAATTTGGTG
GTGCCCAAAACGAAGCTCTCCCAATCTTGGACTCAACTCCCTCGACCCTCAAAATCAAGAGGCTCCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGCTCGGCCTTCAGTCAGGTCATTCATCAAACAGATTTGTTCCAATTCACAAGCCGATTCTTCTTGCTTCGGCTACATTTTCTCCCTGCCGTTTCCTGCATACAACG
CGCACCATCACACATTTCAGTCTCGCTTCTCCGCCTCTCCGCCTCTCCATTTCCTTCTCATCTCATCGCGAAACAGAACTTGAAAGAAACAGAAAAAATGCACCGATCGG
TGAGCTGGAACCGATTCTCCGATGAATACTACTCGTCCTCCTCCCCGTCGCCGGCGCTGTCATCGACTCCAGGCCAGGCGTTGCGATTATCATTTGACGGAAATGAGCAG
CCGACGAGTTATCCAGCGGATGAGATAGTGAAGCGAGAGAAGGCGCGAGTCAAGTTCGCCGCAACTGCTGTTCATGTGATTCCTCTCGTTTTGGTTCTCTGCGCCATTCT
TCTGTGGTTCTTCTCCAATCCAGAAATAGATGCGGGGATGAGATGGGATCCAATGGCAGCAAGAATTGAAGGATTGAACGTTGAGGGGGAAATTGAGAGGGAATTTGGTG
GTGCCCAAAACGAAGCTCTCCCAATCTTGGACTCAACTCCCTCGACCCTCAAAATCAAGAGGCTCCATTAACCTCGTATCAAATATTACGATACTACCTACGTATTATTA
TACCTATTCGTATTGACGTTGTCGATAGATAGTACCAAAATATAGACACCTCTTTATGAGAACGTTGATAATTTTGAATGCTTTGAAGGTTTATTAGTTGAA
Protein sequenceShow/hide protein sequence
MCSAFSQVIHQTDLFQFTSRFFLLRLHFLPAVSCIQRAPSHISVSLLRLSASPFPSHLIAKQNLKETEKMHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLSFDGNEQ
PTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAARIEGLNVEGEIEREFGGAQNEALPILDSTPSTLKIKRLH