; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg08048 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08048
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMediator of RNA polymerase II transcription subunit 31
Genome locationCarg_Chr04:1953542..1958305
RNA-Seq ExpressionCarg08048
SyntenyCarg08048
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016592 - mediator complex (cellular component)
GO:0070847 - core mediator complex (cellular component)
GO:0003712 - transcription coregulator activity (molecular function)
InterPro domainsIPR008831 - Mediator complex, subunit Med31
IPR038089 - Mediator of RNA polymerase II, subunit Med31 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008453845.1 PREDICTED: mediator of RNA polymerase II transcription subunit 31 [Cucumis melo]2.9e-9789.37Show/hide
Query:  MASNYGLNEEAADSPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRS
        MASN+GLNEEAAD+PSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQ+PEYIK+IMYPHCLFFLELLQN+NFR+
Subjt:  MASNYGLNEEAADSPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRS

Query:  AMAHPANKELAHRQQFYFWKNYRNNRLKHILPRSFPEPAALPPPVSAPSQAPV--PTTAPAMAASPAAATPALSPMQYGIPPGSGLSKNDMKNAAIDRRK
        AMAHP NKELAHRQQFYFWKNYRNNRLKHILPR  PEPAALPPPVSAP QAPV  PT AP +AASP  AT ALSPMQYGIPPG GL KNDMK A IDRRK
Subjt:  AMAHPANKELAHRQQFYFWKNYRNNRLKHILPRSFPEPAALPPPVSAPSQAPV--PTTAPAMAASPAAATPALSPMQYGIPPGSGLSKNDMKNAAIDRRK

Query:  RKHERSM
        RKHERSM
Subjt:  RKHERSM

XP_022942362.1 mediator of RNA polymerase II transcription subunit 31-like [Cucurbita moschata]1.0e-110100Show/hide
Query:  MASNYGLNEEAADSPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRS
        MASNYGLNEEAADSPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRS
Subjt:  MASNYGLNEEAADSPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRS

Query:  AMAHPANKELAHRQQFYFWKNYRNNRLKHILPRSFPEPAALPPPVSAPSQAPVPTTAPAMAASPAAATPALSPMQYGIPPGSGLSKNDMKNAAIDRRKRK
        AMAHPANKELAHRQQFYFWKNYRNNRLKHILPRSFPEPAALPPPVSAPSQAPVPTTAPAMAASPAAATPALSPMQYGIPPGSGLSKNDMKNAAIDRRKRK
Subjt:  AMAHPANKELAHRQQFYFWKNYRNNRLKHILPRSFPEPAALPPPVSAPSQAPVPTTAPAMAASPAAATPALSPMQYGIPPGSGLSKNDMKNAAIDRRKRK

Query:  HERSM
        HERSM
Subjt:  HERSM

XP_022984406.1 mediator of RNA polymerase II transcription subunit 31-like [Cucurbita maxima]1.9e-9689.76Show/hide
Query:  MASNYGLNEEAADSPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRS
        MASN+ LNEEA D+PSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFR+
Subjt:  MASNYGLNEEAADSPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRS

Query:  AMAHPANKELAHRQQFYFWKNYRNNRLKHILPRSFPEPAALPPPVSAPSQAPVPTTAPAMAASPAAATPALSPMQYGIPPGSGLSKNDMKNAAIDRRKRK
        AMAHPANKEL HRQQFYFWKNYRNNRLKHILPR  PEPAA PP VS P QAPV   APAMAASP A TP LSPMQYG+PPGSG+SKNDMKNA IDRRKRK
Subjt:  AMAHPANKELAHRQQFYFWKNYRNNRLKHILPRSFPEPAALPPPVSAPSQAPVPTTAPAMAASPAAATPALSPMQYGIPPGSGLSKNDMKNAAIDRRKRK

Query:  HERSM
        HERSM
Subjt:  HERSM

XP_022990254.1 mediator of RNA polymerase II transcription subunit 31-like [Cucurbita maxima]5.7e-10999.51Show/hide
Query:  MASNYGLNEEAADSPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRS
        MASNYGLNEEAADSPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRS
Subjt:  MASNYGLNEEAADSPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRS

Query:  AMAHPANKELAHRQQFYFWKNYRNNRLKHILPRSFPEPAALPPPVSAPSQAPVPTTAPAMAASPAAATPALSPMQYGIPPGSGLSKNDMKNAAIDRRKRK
        AMAHPANKELAHRQQFYFWKNYRNNRLKHILPRSFPEPAALPPPVSAPSQAPVPTTAPAMAASP AATPALSPMQYGIPPGSGLSKNDMKNAAIDRRKRK
Subjt:  AMAHPANKELAHRQQFYFWKNYRNNRLKHILPRSFPEPAALPPPVSAPSQAPVPTTAPAMAASPAAATPALSPMQYGIPPGSGLSKNDMKNAAIDRRKRK

Query:  HERSM
        HERSM
Subjt:  HERSM

XP_038880162.1 mediator of RNA polymerase II transcription subunit 31 [Benincasa hispida]9.1e-9990.73Show/hide
Query:  MASNYGLNEEAADSPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRS
        MASN GLNEEAA +PSSPT+VYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQ+PEYIK+IMYPHCLFFLELLQN+NFR+
Subjt:  MASNYGLNEEAADSPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRS

Query:  AMAHPANKELAHRQQFYFWKNYRNNRLKHILPRSFPEPAALPPPVSAPSQAPVPTTAPAMAASPAAATPALSPMQYGIPPGSGLSKNDMKNAAIDRRKRK
        AMAHP NKELAHRQQFYFWKNYRNNRLKHILPR  PEPAALPPPVSAP QAPVP  APAMAASP A TPALSPMQYGIPPGSGL KNDMK+A IDRRKRK
Subjt:  AMAHPANKELAHRQQFYFWKNYRNNRLKHILPRSFPEPAALPPPVSAPSQAPVPTTAPAMAASPAAATPALSPMQYGIPPGSGLSKNDMKNAAIDRRKRK

Query:  HERSM
        HERSM
Subjt:  HERSM

TrEMBL top hitse value%identityAlignment
A0A1S3BY12 Mediator of RNA polymerase II transcription subunit 311.4e-9789.37Show/hide
Query:  MASNYGLNEEAADSPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRS
        MASN+GLNEEAAD+PSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQ+PEYIK+IMYPHCLFFLELLQN+NFR+
Subjt:  MASNYGLNEEAADSPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRS

Query:  AMAHPANKELAHRQQFYFWKNYRNNRLKHILPRSFPEPAALPPPVSAPSQAPV--PTTAPAMAASPAAATPALSPMQYGIPPGSGLSKNDMKNAAIDRRK
        AMAHP NKELAHRQQFYFWKNYRNNRLKHILPR  PEPAALPPPVSAP QAPV  PT AP +AASP  AT ALSPMQYGIPPG GL KNDMK A IDRRK
Subjt:  AMAHPANKELAHRQQFYFWKNYRNNRLKHILPRSFPEPAALPPPVSAPSQAPV--PTTAPAMAASPAAATPALSPMQYGIPPGSGLSKNDMKNAAIDRRK

Query:  RKHERSM
        RKHERSM
Subjt:  RKHERSM

A0A5D3D0Y1 Mediator of RNA polymerase II transcription subunit 311.4e-9789.37Show/hide
Query:  MASNYGLNEEAADSPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRS
        MASN+GLNEEAAD+PSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQ+PEYIK+IMYPHCLFFLELLQN+NFR+
Subjt:  MASNYGLNEEAADSPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRS

Query:  AMAHPANKELAHRQQFYFWKNYRNNRLKHILPRSFPEPAALPPPVSAPSQAPV--PTTAPAMAASPAAATPALSPMQYGIPPGSGLSKNDMKNAAIDRRK
        AMAHP NKELAHRQQFYFWKNYRNNRLKHILPR  PEPAALPPPVSAP QAPV  PT AP +AASP  AT ALSPMQYGIPPG GL KNDMK A IDRRK
Subjt:  AMAHPANKELAHRQQFYFWKNYRNNRLKHILPRSFPEPAALPPPVSAPSQAPV--PTTAPAMAASPAAATPALSPMQYGIPPGSGLSKNDMKNAAIDRRK

Query:  RKHERSM
        RKHERSM
Subjt:  RKHERSM

A0A6J1FQ18 Mediator of RNA polymerase II transcription subunit 315.0e-111100Show/hide
Query:  MASNYGLNEEAADSPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRS
        MASNYGLNEEAADSPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRS
Subjt:  MASNYGLNEEAADSPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRS

Query:  AMAHPANKELAHRQQFYFWKNYRNNRLKHILPRSFPEPAALPPPVSAPSQAPVPTTAPAMAASPAAATPALSPMQYGIPPGSGLSKNDMKNAAIDRRKRK
        AMAHPANKELAHRQQFYFWKNYRNNRLKHILPRSFPEPAALPPPVSAPSQAPVPTTAPAMAASPAAATPALSPMQYGIPPGSGLSKNDMKNAAIDRRKRK
Subjt:  AMAHPANKELAHRQQFYFWKNYRNNRLKHILPRSFPEPAALPPPVSAPSQAPVPTTAPAMAASPAAATPALSPMQYGIPPGSGLSKNDMKNAAIDRRKRK

Query:  HERSM
        HERSM
Subjt:  HERSM

A0A6J1J551 Mediator of RNA polymerase II transcription subunit 319.2e-9789.76Show/hide
Query:  MASNYGLNEEAADSPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRS
        MASN+ LNEEA D+PSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFR+
Subjt:  MASNYGLNEEAADSPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRS

Query:  AMAHPANKELAHRQQFYFWKNYRNNRLKHILPRSFPEPAALPPPVSAPSQAPVPTTAPAMAASPAAATPALSPMQYGIPPGSGLSKNDMKNAAIDRRKRK
        AMAHPANKEL HRQQFYFWKNYRNNRLKHILPR  PEPAA PP VS P QAPV   APAMAASP A TP LSPMQYG+PPGSG+SKNDMKNA IDRRKRK
Subjt:  AMAHPANKELAHRQQFYFWKNYRNNRLKHILPRSFPEPAALPPPVSAPSQAPVPTTAPAMAASPAAATPALSPMQYGIPPGSGLSKNDMKNAAIDRRKRK

Query:  HERSM
        HERSM
Subjt:  HERSM

A0A6J1JRK2 Mediator of RNA polymerase II transcription subunit 312.7e-10999.51Show/hide
Query:  MASNYGLNEEAADSPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRS
        MASNYGLNEEAADSPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRS
Subjt:  MASNYGLNEEAADSPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRS

Query:  AMAHPANKELAHRQQFYFWKNYRNNRLKHILPRSFPEPAALPPPVSAPSQAPVPTTAPAMAASPAAATPALSPMQYGIPPGSGLSKNDMKNAAIDRRKRK
        AMAHPANKELAHRQQFYFWKNYRNNRLKHILPRSFPEPAALPPPVSAPSQAPVPTTAPAMAASP AATPALSPMQYGIPPGSGLSKNDMKNAAIDRRKRK
Subjt:  AMAHPANKELAHRQQFYFWKNYRNNRLKHILPRSFPEPAALPPPVSAPSQAPVPTTAPAMAASPAAATPALSPMQYGIPPGSGLSKNDMKNAAIDRRKRK

Query:  HERSM
        HERSM
Subjt:  HERSM

SwissProt top hitse value%identityAlignment
A0JNN3 Mediator of RNA polymerase II transcription subunit 311.5e-2449.52Show/hide
Query:  DPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRSAMAHPANKELAHRQQFYFWKNYR
        D    R RF LELEFVQCLANP Y+++LAQ  Y +D+AF+ YLKYL YW++PEY KY+ YP CL  LELLQ  +FR  + +    +    QQ   W++Y 
Subjt:  DPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRSAMAHPANKELAHRQQFYFWKNYR

Query:  NNRLK
          R++
Subjt:  NNRLK

Q54NI7 Putative mediator of RNA polymerase II transcription subunit 318.4e-3157.73Show/hide
Query:  RFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRSAMAHPANKELAHRQQFYFWKNYRNNRL
        RF++ELEF+QCL+NP Y++YLAQNRY +D+AF+ YL YLQYW++PEY K+I+YP  L+FL+LLQ   FR  + H  + +  H QQFY W+ YRNNR+
Subjt:  RFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRSAMAHPANKELAHRQQFYFWKNYRNNRL

Q8VYB1 Mediator of RNA polymerase II transcription subunit 314.0e-7371.43Show/hide
Query:  MASNYGLNEEAADSPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRS
        MAS   + ++A++ PS P N YKDPD GRQRFLLELEF+QCLANPTYIHYLAQNRY EDEAFIGYLKYLQYWQ+PEYIK+IMYPHCL+FLELLQN NFR+
Subjt:  MASNYGLNEEAADSPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRS

Query:  AMAHPANKELAHRQQFYFWKNYRNNRLKHILPRSFPEPAALPPPVSAPSQAPVPTTAPAMAASPAAATPALSPMQYGIPPGSGLSKNDMKN---AAIDRR
        AMAHPANKELAHRQQFY+WKNYRNNRLKHILPR  PEP    PPV APS     T+ P   ++ AA +PALSPMQY     + LSKND +N     IDRR
Subjt:  AMAHPANKELAHRQQFYFWKNYRNNRLKHILPRSFPEPAALPPPVSAPSQAPVPTTAPAMAASPAAATPALSPMQYGIPPGSGLSKNDMKN---AAIDRR

Query:  KRK
        KRK
Subjt:  KRK

Q9CXU1 Mediator of RNA polymerase II transcription subunit 312.0e-2449.52Show/hide
Query:  DPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRSAMAHPANKELAHRQQFYFWKNYR
        D    R RF LELEFVQCLANP Y+++LAQ  Y +D+AF+ YLKYL YW++PEY KY+ YP CL  LELLQ  +FR  + +    +    QQ   W++Y 
Subjt:  DPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRSAMAHPANKELAHRQQFYFWKNYR

Query:  NNRLK
          R++
Subjt:  NNRLK

Q9Y3C7 Mediator of RNA polymerase II transcription subunit 312.6e-2449.52Show/hide
Query:  DPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRSAMAHPANKELAHRQQFYFWKNYR
        D    R RF LELEFVQCLANP Y+++LAQ  Y +D+AF+ YLKYL YW+ PEY KY+ YP CL  LELLQ  +FR  + +    +    QQ   W++Y 
Subjt:  DPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRSAMAHPANKELAHRQQFYFWKNYR

Query:  NNRLK
          R++
Subjt:  NNRLK

Arabidopsis top hitse value%identityAlignment
AT5G19910.1 SOH1 family protein2.8e-7471.43Show/hide
Query:  MASNYGLNEEAADSPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRS
        MAS   + ++A++ PS P N YKDPD GRQRFLLELEF+QCLANPTYIHYLAQNRY EDEAFIGYLKYLQYWQ+PEYIK+IMYPHCL+FLELLQN NFR+
Subjt:  MASNYGLNEEAADSPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRS

Query:  AMAHPANKELAHRQQFYFWKNYRNNRLKHILPRSFPEPAALPPPVSAPSQAPVPTTAPAMAASPAAATPALSPMQYGIPPGSGLSKNDMKN---AAIDRR
        AMAHPANKELAHRQQFY+WKNYRNNRLKHILPR  PEP    PPV APS     T+ P   ++ AA +PALSPMQY     + LSKND +N     IDRR
Subjt:  AMAHPANKELAHRQQFYFWKNYRNNRLKHILPRSFPEPAALPPPVSAPSQAPVPTTAPAMAASPAAATPALSPMQYGIPPGSGLSKNDMKN---AAIDRR

Query:  KRK
        KRK
Subjt:  KRK

AT5G19910.2 SOH1 family protein1.6e-6962.23Show/hide
Query:  MASNYGLNEEAADSPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRS
        MAS   + ++A++ PS P N YKDPD GRQRFLLELEF+QCLANPTYIHYLAQNRY EDEAFIGYLKYLQYWQ+PEYIK+IMYPHCL+FLELLQN NFR+
Subjt:  MASNYGLNEEAADSPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRS

Query:  AMAHPANK------------------------------ELAHRQQFYFWKNYRNNRLKHILPRSFPEPAALPPPVSAPSQAPVPTTAPAMAASPAAATPA
        AMAHPANK                              ELAHRQQFY+WKNYRNNRLKHILPR  PEP    PPV APS     T+ P   ++ AA +PA
Subjt:  AMAHPANK------------------------------ELAHRQQFYFWKNYRNNRLKHILPRSFPEPAALPPPVSAPSQAPVPTTAPAMAASPAAATPA

Query:  LSPMQYGIPPGSGLSKNDMKN---AAIDRRKRK
        LSPMQY     + LSKND +N     IDRRKRK
Subjt:  LSPMQYGIPPGSGLSKNDMKN---AAIDRRKRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTAATTATGGATTAAACGAAGAAGCAGCTGATTCCCCATCATCGCCTACGAATGTGTACAAGGATCCAGATGACGGGCGGCAGCGGTTCTTGCTCGAATTGGA
ATTCGTTCAATGTCTCGCGAATCCGACCTACATTCACTATCTGGCTCAGAATCGTTACCTCGAGGACGAAGCTTTTATCGGTTACTTGAAGTACCTTCAATATTGGCAAC
AGCCGGAGTATATTAAGTATATAATGTATCCTCATTGTCTCTTTTTTCTTGAACTTCTACAAAATGCGAACTTCCGAAGTGCAATGGCTCATCCTGCCAACAAGGAATTG
GCACACAGGCAGCAATTTTACTTCTGGAAGAACTATAGGAACAATCGTTTGAAACATATTTTACCGCGATCGTTTCCCGAACCTGCTGCCCTACCACCCCCAGTTTCTGC
TCCATCTCAGGCACCTGTGCCTACCACAGCCCCTGCCATGGCAGCTTCTCCTGCTGCTGCTACACCTGCCCTTTCACCGATGCAGTATGGTATTCCCCCTGGATCCGGGC
TTTCAAAGAACGACATGAAGAATGCAGCAATTGATCGACGAAAGAGAAAACATGAAAGAAGTATGTAG
mRNA sequenceShow/hide mRNA sequence
AATAATAATAAAAAAAATATATATATATATACTTGCACCAAAGCATAGTTAGCGGGCATATTTCATTATTTTGAGTTAATTTCTCTCTGGGTTGTGAATGTAGCCATTGC
CGCGAAGAACTTTGAAGGAGATCAGACCGCTAGCAAGTTCATCGATCTTTTGGGGTTCAAATTTTGACTTCTAGTCAACGAGCTTCCAAATTCGACGAGTCAGATATCCA
ATGGCTTCTAATTATGGATTAAACGAAGAAGCAGCTGATTCCCCATCATCGCCTACGAATGTGTACAAGGATCCAGATGACGGGCGGCAGCGGTTCTTGCTCGAATTGGA
ATTCGTTCAATGTCTCGCGAATCCGACCTACATTCACTATCTGGCTCAGAATCGTTACCTCGAGGACGAAGCTTTTATCGGTTACTTGAAGTACCTTCAATATTGGCAAC
AGCCGGAGTATATTAAGTATATAATGTATCCTCATTGTCTCTTTTTTCTTGAACTTCTACAAAATGCGAACTTCCGAAGTGCAATGGCTCATCCTGCCAACAAGGAATTG
GCACACAGGCAGCAATTTTACTTCTGGAAGAACTATAGGAACAATCGTTTGAAACATATTTTACCGCGATCGTTTCCCGAACCTGCTGCCCTACCACCCCCAGTTTCTGC
TCCATCTCAGGCACCTGTGCCTACCACAGCCCCTGCCATGGCAGCTTCTCCTGCTGCTGCTACACCTGCCCTTTCACCGATGCAGTATGGTATTCCCCCTGGATCCGGGC
TTTCAAAGAACGACATGAAGAATGCAGCAATTGATCGACGAAAGAGAAAACATGAAAGAAGTATGTAGTTCAGCCAAAACTAGGCTGGATGCGGGACCAGCTCGTGAGGT
AATCTGCATTGATGTCAAAACTTAAGTACTTTCCATCCTGTTGCTTGGGGTCGTGCAAAATATCTCCATTGAGAGCTCATAAACATGAGCTACACGAGCTCGATGTTTTT
CGGTTCGAGTAATATGTTCATGGAAGAAGCTCTACATGTTATTAGTATGAAATGTTCCGAAACAATCCTTAAAAATACTGCCTACCGATATGTCGGGTTATTATATCCAC
CTATAATCCGTGGTAAGCAGTTCCTTCCCTAACTTTCGTTCTCTCCTTCCTTAATTGACTTGACATGAAACGTTGTGGTTGTATGTGGTTCGAATTGGTATTAGGATAGA
ATTAGTAACATTACGACGGTTGTAAGGATATATTAGTAATTAGCTAGAAAAGTCGTGAAGGTAGTTTGTTTTAAGTAGGGAGATTGTTTAGCGGTTTCGACTCCAGTGGC
ATCTCAATGAGAGGTTTTAGGTACTTCGATTACTCTGGAAGTTATCTTGTTATAATGTTATTTTTCGTATCGGTATGATATGCCCAAATGAGGTCTCTTAGATACAATCG
AGACAAAAAAAAATT
Protein sequenceShow/hide protein sequence
MASNYGLNEEAADSPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRSAMAHPANKEL
AHRQQFYFWKNYRNNRLKHILPRSFPEPAALPPPVSAPSQAPVPTTAPAMAASPAAATPALSPMQYGIPPGSGLSKNDMKNAAIDRRKRKHERSM