; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg08049 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08049
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPolyadenylate-binding protein 1-like
Genome locationCarg_Chr04:1958496..1963183
RNA-Seq ExpressionCarg08049
SyntenyCarg08049
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600212.1 Polyadenylate-binding protein 2, partial [Cucurbita argyrosperma subsp. sororia]3.2e-12499.57Show/hide
Query:  MEHNFNYDEHEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAE
        MEHNFNYDEHEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQ DSSSTSATQAE
Subjt:  MEHNFNYDEHEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAE

Query:  KEEVDARSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPYG
        KEEVDARSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPYG
Subjt:  KEEVDARSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPYG

Query:  FRGRRPFMADAPFYPSYGYGRVPRFRRPMRYRPY
        FRGRRPFMADAPFYPSYGYGRVPRFRRPMRYRPY
Subjt:  FRGRRPFMADAPFYPSYGYGRVPRFRRPMRYRPY

KAG7030873.1 Polyadenylate-binding protein 2 [Cucurbita argyrosperma subsp. argyrosperma]5.8e-126100Show/hide
Query:  MEHNFNYDEHEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAE
        MEHNFNYDEHEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAE
Subjt:  MEHNFNYDEHEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAE

Query:  KEEVDARSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPYG
        KEEVDARSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPYG
Subjt:  KEEVDARSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPYG

Query:  FRGRRPFMADAPFYPSYGYGRVPRFRRPMRYRPY
        FRGRRPFMADAPFYPSYGYGRVPRFRRPMRYRPY
Subjt:  FRGRRPFMADAPFYPSYGYGRVPRFRRPMRYRPY

XP_022989860.1 polyadenylate-binding protein 1-like isoform X1 [Cucurbita maxima]4.2e-12498.73Show/hide
Query:  MEHNFNYD--EHEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQ
        MEHNFNYD  EHEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTN+NSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQ
Subjt:  MEHNFNYD--EHEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQ

Query:  AEKEEVDARSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP
        AEKEEVDARSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP
Subjt:  AEKEEVDARSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP

Query:  YGFRGRRPFMADAPFYPSYGYGRVPRFRRPMRYRPY
        YGFRGRRPFMADAPFYPSYGYGRVPRFRRPMRYRPY
Subjt:  YGFRGRRPFMADAPFYPSYGYGRVPRFRRPMRYRPY

XP_023516160.1 polyadenylate-binding protein 1-like isoform X1 [Cucurbita pepo subsp. pepo]1.3e-12599.57Show/hide
Query:  MEHNFNYDEHEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAE
        MEHNFNYDEHEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTN+NSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAE
Subjt:  MEHNFNYDEHEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAE

Query:  KEEVDARSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPYG
        KEEVDARSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPYG
Subjt:  KEEVDARSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPYG

Query:  FRGRRPFMADAPFYPSYGYGRVPRFRRPMRYRPY
        FRGRRPFMADAPFYPSYGYGRVPRFRRPMRYRPY
Subjt:  FRGRRPFMADAPFYPSYGYGRVPRFRRPMRYRPY

XP_023516168.1 polyadenylate-binding protein 1-like isoform X2 [Cucurbita pepo subsp. pepo]7.1e-12499.15Show/hide
Query:  MEHNFNYDEHEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAE
        MEHNFNYDEHEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTN+NSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQ DSSSTSATQAE
Subjt:  MEHNFNYDEHEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAE

Query:  KEEVDARSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPYG
        KEEVDARSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPYG
Subjt:  KEEVDARSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPYG

Query:  FRGRRPFMADAPFYPSYGYGRVPRFRRPMRYRPY
        FRGRRPFMADAPFYPSYGYGRVPRFRRPMRYRPY
Subjt:  FRGRRPFMADAPFYPSYGYGRVPRFRRPMRYRPY

TrEMBL top hitse value%identityAlignment
A0A1S3BYF0 polyadenylate-binding protein 1-like isoform X21.5e-11494.44Show/hide
Query:  MEHNFNYDEHEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAE
        ME N+NYD  EHEHEVYGGDIPDDAEMDADLDMSSGRADEEGY DAEP+N+NSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAE
Subjt:  MEHNFNYDEHEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAE

Query:  KEEVDARSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPYG
        KEEVD+RSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP+G
Subjt:  KEEVDARSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPYG

Query:  FRGRRPFMADAPFYPSYGYGRVPRFRRPMRYRPY
        FRGRRPF   AP YPSYGYGRVPRFRRPMRYRPY
Subjt:  FRGRRPFMADAPFYPSYGYGRVPRFRRPMRYRPY

A0A6J1FPG9 polyadenylate-binding protein 1-like isoform X22.1e-12198.29Show/hide
Query:  MEHNFNYDEHEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAE
        MEHNFNYD  EHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTN+NSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQ DSSSTSATQAE
Subjt:  MEHNFNYDEHEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAE

Query:  KEEVDARSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPYG
        KEEVDARSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPYG
Subjt:  KEEVDARSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPYG

Query:  FRGRRPFMADAPFYPSYGYGRVPRFRRPMRYRPY
        FRGRRPFMADAPFYPSYGYGRVPRFRRPMRYRPY
Subjt:  FRGRRPFMADAPFYPSYGYGRVPRFRRPMRYRPY

A0A6J1FT42 polyadenylate-binding protein 1-like isoform X12.9e-12398.72Show/hide
Query:  MEHNFNYDEHEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAE
        MEHNFNYD  EHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTN+NSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAE
Subjt:  MEHNFNYDEHEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAE

Query:  KEEVDARSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPYG
        KEEVDARSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPYG
Subjt:  KEEVDARSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPYG

Query:  FRGRRPFMADAPFYPSYGYGRVPRFRRPMRYRPY
        FRGRRPFMADAPFYPSYGYGRVPRFRRPMRYRPY
Subjt:  FRGRRPFMADAPFYPSYGYGRVPRFRRPMRYRPY

A0A6J1JLK3 polyadenylate-binding protein 1-like isoform X21.1e-12298.31Show/hide
Query:  MEHNFNYD--EHEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQ
        MEHNFNYD  EHEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTN+NSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQ DSSSTSATQ
Subjt:  MEHNFNYD--EHEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQ

Query:  AEKEEVDARSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP
        AEKEEVDARSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP
Subjt:  AEKEEVDARSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP

Query:  YGFRGRRPFMADAPFYPSYGYGRVPRFRRPMRYRPY
        YGFRGRRPFMADAPFYPSYGYGRVPRFRRPMRYRPY
Subjt:  YGFRGRRPFMADAPFYPSYGYGRVPRFRRPMRYRPY

A0A6J1JNI9 polyadenylate-binding protein 1-like isoform X12.0e-12498.73Show/hide
Query:  MEHNFNYD--EHEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQ
        MEHNFNYD  EHEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTN+NSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQ
Subjt:  MEHNFNYD--EHEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQ

Query:  AEKEEVDARSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP
        AEKEEVDARSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP
Subjt:  AEKEEVDARSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP

Query:  YGFRGRRPFMADAPFYPSYGYGRVPRFRRPMRYRPY
        YGFRGRRPFMADAPFYPSYGYGRVPRFRRPMRYRPY
Subjt:  YGFRGRRPFMADAPFYPSYGYGRVPRFRRPMRYRPY

SwissProt top hitse value%identityAlignment
O14327 Polyadenylate-binding protein 29.0e-3752.3Show/hide
Query:  DAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDARSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-
        D +  ++  K+L +MK R+ E+E EA  LR MQ +++ E          T A + +KE +DA+SVYVGNVDY+ TPEE+Q HF SCG+VNRVTIL DKF 
Subjt:  DAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDARSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-

Query:  GHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPYGFRGRRPFMADAPFYPSY
        GHPKGFAY+EF E   V NALLLN S LH R LKV+ KRTNVPGM + RGR       RGR  +   A  +  Y
Subjt:  GHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPYGFRGRRPFMADAPFYPSY

Q8CCS6 Polyadenylate-binding protein 23.6e-3042.73Show/hide
Query:  SSGRADEEGYDDAEPTNSNSKD--LEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQA--EKEEVDARSVYVGNVDYACTPEEVQQHFQS
        S    +E G  +A+P +   +D  LE +K R++E+EEEA  L+E+Q +VEK+M       ++     +  EK E DARS+YVGNVDY  T EE++ HF  
Subjt:  SSGRADEEGYDDAEPTNSNSKD--LEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQA--EKEEVDARSVYVGNVDYACTPEEVQQHFQS

Query:  CGTVNRVTILTDKF-GHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGM---------KQYRGRRPNPYGFRGRRPFMADAPFYPSYG-
        CG+VNRVTIL DKF GHPKGFAY+EF + ++V+ +L L+ES   GRQ+KV  KRTN PG+          +YR R  N    R R        FY  +  
Subjt:  CGTVNRVTILTDKF-GHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGM---------KQYRGRRPNPYGFRGRRPFMADAPFYPSYG-

Query:  --YGRV--PRFRRPMRYRPY
           GR+   R R    Y PY
Subjt:  --YGRV--PRFRRPMRYRPY

Q93VI4 Polyadenylate-binding protein 12.7e-8172.37Show/hide
Query:  EHEHEVYGGDIPDDAEMDADLDMSSGRADEEGY---DDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDAR
        E EHEVYGG+IP++ E + D +       EEG    D+     S+S+DLEDMK+R+KEIEEEAGALREMQAK EK+MGA Q+ S   SA  AEKEEVD+R
Subjt:  EHEHEVYGGDIPDDAEMDADLDMSSGRADEEGY---DDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDAR

Query:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGR-RPNPYGFRGRRP
        S+YVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFVEV+AVQN+L+LNESELHGRQ+KVSAKRTNVPGM+Q+RGR RP    FR  R 
Subjt:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGR-RPNPYGFRGRRP

Query:  FMADAPFYPSYGYGRVPRFRRPMRYRPY
        FM   PFYP Y YGRVPRFRRPMRYRPY
Subjt:  FMADAPFYPSYGYGRVPRFRRPMRYRPY

Q9FJN9 Polyadenylate-binding protein 26.8e-7770.67Show/hide
Query:  EHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDARSVY
        E EHEVYGG+IPD  EMD D++  +   D    DD        K+L++MK+RLKE+E+EA ALREMQAKVEKEMGA  +D +S +A QA KEEVDARSV+
Subjt:  EHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDARSVY

Query:  VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPY-GFRGRRPFMA
        VGNVDYACTPEEVQQHFQ+CGTV+RVTILTDKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKV  KRTNVPG+KQ+RGRR NPY G+R RRPFM+
Subjt:  VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPY-GFRGRRPFMA

Query:  DAPFYPSYGYGRVPRFRRPMRYRPY
           + P YGYG+ PRFRRPMRY PY
Subjt:  DAPFYPSYGYGRVPRFRRPMRYRPY

Q9LX90 Polyadenylate-binding protein 35.9e-7369.74Show/hide
Query:  EHEHEVYGGDIPDDAEMDA---DLDMSSGRADEEGYDDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDAR
        E EHEVYGG+IP+  + D    D+DMS+  ADE+             +L +MKRRLKE+EEEA ALREMQAKVEKEMGA Q D +S +A Q  KEEVDAR
Subjt:  EHEHEVYGGDIPDDAEMDA---DLDMSSGRADEEGYDDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDAR

Query:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP-YGFRGRRP
        SVYVGNVDYACTPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKVS KRTNVPGMKQY   R NP  G+R RRP
Subjt:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP-YGFRGRRP

Query:  FMADAPFYPSYGYGRVPRFRRPMRYRPY
        F+    FY  YGYG+ PRFRRPMRY PY
Subjt:  FMADAPFYPSYGYGRVPRFRRPMRYRPY

Arabidopsis top hitse value%identityAlignment
AT5G10350.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.2e-7469.74Show/hide
Query:  EHEHEVYGGDIPDDAEMDA---DLDMSSGRADEEGYDDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDAR
        E EHEVYGG+IP+  + D    D+DMS+  ADE+             +L +MKRRLKE+EEEA ALREMQAKVEKEMGA Q D +S +A Q  KEEVDAR
Subjt:  EHEHEVYGGDIPDDAEMDA---DLDMSSGRADEEGYDDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDAR

Query:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP-YGFRGRRP
        SVYVGNVDYACTPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKVS KRTNVPGMKQY   R NP  G+R RRP
Subjt:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP-YGFRGRRP

Query:  FMADAPFYPSYGYGRVPRFRRPMRYRPY
        F+    FY  YGYG+ PRFRRPMRY PY
Subjt:  FMADAPFYPSYGYGRVPRFRRPMRYRPY

AT5G10350.2 RNA-binding (RRM/RBD/RNP motifs) family protein6.5e-6769.16Show/hide
Query:  EHEHEVYGGDIPDDAEMDA---DLDMSSGRADEEGYDDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDAR
        E EHEVYGG+IP+  + D    D+DMS+  ADE+             +L +MKRRLKE+EEEA ALREMQAKVEKEMGA Q D +S +A Q  KEEVDAR
Subjt:  EHEHEVYGGDIPDDAEMDA---DLDMSSGRADEEGYDDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDAR

Query:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP-YGFRGRRP
        SVYVGNVDYACTPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKVS KRTNVPGMKQY   R NP  G+R RRP
Subjt:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP-YGFRGRRP

Query:  FMADAPFYPSYGYG
        F+    FY  YGYG
Subjt:  FMADAPFYPSYGYG

AT5G51120.1 polyadenylate-binding protein 11.9e-8272.37Show/hide
Query:  EHEHEVYGGDIPDDAEMDADLDMSSGRADEEGY---DDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDAR
        E EHEVYGG+IP++ E + D +       EEG    D+     S+S+DLEDMK+R+KEIEEEAGALREMQAK EK+MGA Q+ S   SA  AEKEEVD+R
Subjt:  EHEHEVYGGDIPDDAEMDADLDMSSGRADEEGY---DDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDAR

Query:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGR-RPNPYGFRGRRP
        S+YVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFVEV+AVQN+L+LNESELHGRQ+KVSAKRTNVPGM+Q+RGR RP    FR  R 
Subjt:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGR-RPNPYGFRGRRP

Query:  FMADAPFYPSYGYGRVPRFRRPMRYRPY
        FM   PFYP Y YGRVPRFRRPMRYRPY
Subjt:  FMADAPFYPSYGYGRVPRFRRPMRYRPY

AT5G51120.2 polyadenylate-binding protein 14.1e-7761.36Show/hide
Query:  EHEHEVYGGDIPDDAEMDADLDMSSGRADEEGY---DDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQ-------------------
        E EHEVYGG+IP++ E + D +       EEG    D+     S+S+DLEDMK+R+KEIEEEAGALREMQAK EK+MGA Q                   
Subjt:  EHEHEVYGGDIPDDAEMDADLDMSSGRADEEGY---DDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQ-------------------

Query:  -----------------EDSSSTSATQAEKEEVDARSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESEL
                         ++  ++  + AEKEEVD+RS+YVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFVEV+AVQN+L+LNESEL
Subjt:  -----------------EDSSSTSATQAEKEEVDARSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESEL

Query:  HGRQLKVSAKRTNVPGMKQYRGR-RPNPYGFRGRRPFMADAPFYPSYGYGRVPRFRRPMRYRPY
        HGRQ+KVSAKRTNVPGM+Q+RGR RP    FR  R FM   PFYP Y YGRVPRFRRPMRYRPY
Subjt:  HGRQLKVSAKRTNVPGMKQYRGR-RPNPYGFRGRRPFMADAPFYPSYGYGRVPRFRRPMRYRPY

AT5G65260.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.8e-7870.67Show/hide
Query:  EHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDARSVY
        E EHEVYGG+IPD  EMD D++  +   D    DD        K+L++MK+RLKE+E+EA ALREMQAKVEKEMGA  +D +S +A QA KEEVDARSV+
Subjt:  EHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDARSVY

Query:  VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPY-GFRGRRPFMA
        VGNVDYACTPEEVQQHFQ+CGTV+RVTILTDKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKV  KRTNVPG+KQ+RGRR NPY G+R RRPFM+
Subjt:  VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPY-GFRGRRPFMA

Query:  DAPFYPSYGYGRVPRFRRPMRYRPY
           + P YGYG+ PRFRRPMRY PY
Subjt:  DAPFYPSYGYGRVPRFRRPMRYRPY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCATAATTTCAACTACGACGAGCACGAGCATGAACACGAAGTCTATGGCGGCGATATTCCCGACGATGCCGAGATGGATGCTGACCTCGATATGTCCTCTGGTAG
GGCTGACGAAGAAGGCTACGACGATGCCGAGCCTACTAACTCCAACTCGAAGGACTTGGAGGACATGAAGAGGAGGCTTAAAGAGATCGAGGAGGAGGCCGGTGCTCTTC
GGGAAATGCAGGCCAAGGTTGAGAAAGAGATGGGCGCTGTTCAAGAAGATTCATCCAGTACCTCTGCAACTCAGGCTGAAAAGGAGGAAGTAGATGCTCGATCGGTATAC
GTTGGTAATGTTGACTATGCATGCACTCCTGAAGAGGTGCAACAGCATTTTCAATCATGTGGAACAGTGAACAGAGTCACGATTTTGACTGACAAATTCGGTCACCCCAA
AGGATTTGCTTATGTTGAGTTTGTGGAAGTTGATGCTGTACAGAACGCTTTGCTGTTGAATGAGTCAGAGTTGCATGGTCGCCAACTAAAGGTCTCCGCCAAGAGGACAA
ATGTCCCTGGCATGAAGCAATACCGAGGAAGGCGACCGAACCCTTATGGCTTTCGAGGTCGCCGCCCTTTCATGGCAGATGCCCCTTTTTATCCTTCGTATGGTTATGGA
AGGGTTCCGAGGTTCAGGCGGCCGATGCGGTACAGACCATACTAG
mRNA sequenceShow/hide mRNA sequence
TATGAAATCCAGAGTTACAGACAGGATCCGAAACCTAATCTTCAGCCATTCATAAGTAGACAATATACACAGGGATCGAGTGGCCACCGGAGGCGGAGATGGAGCATAAT
TTCAACTACGACGAGCACGAGCATGAACACGAAGTCTATGGCGGCGATATTCCCGACGATGCCGAGATGGATGCTGACCTCGATATGTCCTCTGGTAGGGCTGACGAAGA
AGGCTACGACGATGCCGAGCCTACTAACTCCAACTCGAAGGACTTGGAGGACATGAAGAGGAGGCTTAAAGAGATCGAGGAGGAGGCCGGTGCTCTTCGGGAAATGCAGG
CCAAGGTTGAGAAAGAGATGGGCGCTGTTCAAGAAGATTCATCCAGTACCTCTGCAACTCAGGCTGAAAAGGAGGAAGTAGATGCTCGATCGGTATACGTTGGTAATGTT
GACTATGCATGCACTCCTGAAGAGGTGCAACAGCATTTTCAATCATGTGGAACAGTGAACAGAGTCACGATTTTGACTGACAAATTCGGTCACCCCAAAGGATTTGCTTA
TGTTGAGTTTGTGGAAGTTGATGCTGTACAGAACGCTTTGCTGTTGAATGAGTCAGAGTTGCATGGTCGCCAACTAAAGGTCTCCGCCAAGAGGACAAATGTCCCTGGCA
TGAAGCAATACCGAGGAAGGCGACCGAACCCTTATGGCTTTCGAGGTCGCCGCCCTTTCATGGCAGATGCCCCTTTTTATCCTTCGTATGGTTATGGAAGGGTTCCGAGG
TTCAGGCGGCCGATGCGGTACAGACCATACTAGGAGGGTGTATAATGCTCGTACTACTACCGCAAATGATTGTTCGGGTTCAGCAGTTCATTCGTCAAGGGCTCAATTTC
CATCTCTATAACTTGGAGGGTGTGGATTGTACTCTATTCATGTTTTAAAATCCGACTCAAAGAGTTTCTTTTTATGAACTTGGTACCAGTTTTAGCTTGTGGGGTTTAAG
ATTTGTGGTTTGCTTCTTTATGTTGGCTCTGGAAGAGCTAAAAACCCATTAGAGAATTTTAAGGAAAGAAAATTAAGGAAACTGAAGGACACAGCCTTTTGTATGGTGAA
TTGGAACTGATCATGACGTAGAATTCTTTGTTATTTAAGAAGTAATTATAAGTTGATATGAAGACCTCCCCCCCTTTTTTGCCCTTTCCAATTTGATTATATTTGTATAT
GTTAGATCTCTCTTTAATTTTCAATTTTAAAGCTCTCTTCGATAATAGCTCGCCCTTGGCTTATTGAAGAAGAAGAGACGTGGTAAGAGAAGAGACGTGGTAAGAGATTA
TGTGAAGGACCCTAAAGTCCCAAGCTGATAAGCTCTTGGATAATCTCGGTCCTCTAACCGATTGGTCGTAGGTTCGAATCCTACAATAAGTATTTGTTGGACCTCCATTT
CTCGAGAGGGAGCCAGGCTGTATTTCCCCAACGGCTGACTAGTGGTAGTAGAAAAACA
Protein sequenceShow/hide protein sequence
MEHNFNYDEHEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTNSNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDARSVY
VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPYGFRGRRPFMADAPFYPSYGYG
RVPRFRRPMRYRPY