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Carg08072 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08072
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionConserved peptide upstream open reading frame 37
Genome locationCarg_Chr04:2113852..2115594
RNA-Seq ExpressionCarg08072
SyntenyCarg08072
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7817008.1 transcription factor BHLH021 [Senna tora]9.1e-2678.21Show/hide
Query:  WLSTSTDVFRKVVHLNLYCS--EVVMVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT
        WLS + +VFRKV+ LNLYC   +VVMVCQAA+QTRFR LKHENGIAG  TIIVRVIACFQPL+ CQAEYFR LLKPVT
Subjt:  WLSTSTDVFRKVVHLNLYCS--EVVMVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT

KAG4954830.1 hypothetical protein JHK87_040424 [Glycine soja]5.3e-2675.31Show/hide
Query:  WLSTSTDVFRKVVHLNLYC-----SEVVMVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT
        WL+ S DV+RKV+ LNLYC     ++VVMVCQAA+QTRFR LKHENG AG  TIIVRVIACFQPL +CQAEYFRHLLKPVT
Subjt:  WLSTSTDVFRKVVHLNLYC-----SEVVMVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT

KAG5052602.1 hypothetical protein JHK87_004800 [Glycine soja]3.1e-2676.54Show/hide
Query:  WLSTSTDVFRKVVHLNLYC-----SEVVMVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT
        WLS S DV+RKV+ LNLYC      +VVMVCQAA+QTRFR LKHENG AG  TIIVRVIACFQPL +CQAEYFRHLLKPVT
Subjt:  WLSTSTDVFRKVVHLNLYC-----SEVVMVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT

KAG6600237.1 hypothetical protein SDJN03_05470, partial [Cucurbita argyrosperma subsp. sororia]1.5e-6899.22Show/hide
Query:  ISSLFLESFRSDSNSQSASLWILFRFCWVLLYKLWIIDCSCGCVTFTHWENNMLWLSTSTDVFRKVVHLNLYCSEVVMVCQAATQTRFRTLKHENGIAGK
        ISSLFLESFRSDSNSQSASLWIL RFCWVLLYKLWIIDCSCGCVTFTHWENNMLWLSTSTDVFRKVVHLNLYCSEVVMVCQAATQTRFRTLKHENGIAGK
Subjt:  ISSLFLESFRSDSNSQSASLWILFRFCWVLLYKLWIIDCSCGCVTFTHWENNMLWLSTSTDVFRKVVHLNLYCSEVVMVCQAATQTRFRTLKHENGIAGK

Query:  PTIIVRVIACFQPLQNCQAEYFRHLLKP
        PTIIVRVIACFQPLQNCQAEYFRHLLKP
Subjt:  PTIIVRVIACFQPLQNCQAEYFRHLLKP

KAG7030896.1 hypothetical protein SDJN02_04933, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-76100Show/hide
Query:  DDRLDTFKGISSLFLESFRSDSNSQSASLWILFRFCWVLLYKLWIIDCSCGCVTFTHWENNMLWLSTSTDVFRKVVHLNLYCSEVVMVCQAATQTRFRTL
        DDRLDTFKGISSLFLESFRSDSNSQSASLWILFRFCWVLLYKLWIIDCSCGCVTFTHWENNMLWLSTSTDVFRKVVHLNLYCSEVVMVCQAATQTRFRTL
Subjt:  DDRLDTFKGISSLFLESFRSDSNSQSASLWILFRFCWVLLYKLWIIDCSCGCVTFTHWENNMLWLSTSTDVFRKVVHLNLYCSEVVMVCQAATQTRFRTL

Query:  KHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT
        KHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT
Subjt:  KHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT

TrEMBL top hitse value%identityAlignment
A0A0A0K458 Uncharacterized protein4.3e-2194.34Show/hide
Query:  MVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT
        MVCQAA+QTRFR LKHENGIAGKPTIIV+VIACFQPLQNCQAEYFRHLLKPVT
Subjt:  MVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT

A0A3Q7JDA5 Uncharacterized protein2.8e-2572.41Show/hide
Query:  NNMLWLSTSTDVFRKVVHLNLYC-------SEVVMVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT
        N+ML    S DV+RKV+ LNLYC        +VVMVCQAA QTRFR LKHENGIAG  TIIVRVIACFQPLQ+CQAEYFR LLKPVT
Subjt:  NNMLWLSTSTDVFRKVVHLNLYC-------SEVVMVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT

A0A427B3H1 Uncharacterized protein1.2e-2358.33Show/hide
Query:  MLWLSTSTDVFRKVVHLNLYC------------------------------SEVVMVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYF
        M WLS S DV+RKV+ L LYC                                VVMVCQAAT+TRFR LKHENGIAG  TIIVRVIACF+PLQ+CQAEYF
Subjt:  MLWLSTSTDVFRKVVHLNLYC------------------------------SEVVMVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYF

Query:  RHLLKPVT
        RHLLKPVT
Subjt:  RHLLKPVT

A0A444EZ51 Uncharacterized protein2.4e-2459.26Show/hide
Query:  MLWLSTSTDVFRKVVHLNLYC------------------------------SEVVMVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYF
        M WLS S DV+RKV+ LNLYC                                VVMVCQAAT+TRFR LKHENGIAG  TIIVRVIACF+PLQ+CQAEYF
Subjt:  MLWLSTSTDVFRKVVHLNLYC------------------------------SEVVMVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYF

Query:  RHLLKPVT
        RHLLKPVT
Subjt:  RHLLKPVT

M0RRS1 Uncharacterized protein2.4e-2459.26Show/hide
Query:  MLWLSTSTDVFRKVVHLNLYC------------------------------SEVVMVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYF
        M WLS S DV+RKV+ LNLYC                                VVMVCQAAT+TRFR LKHENGIAG  TIIVRVIACF+PLQ+CQAEYF
Subjt:  MLWLSTSTDVFRKVVHLNLYC------------------------------SEVVMVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYF

Query:  RHLLKPVT
        RHLLKPVT
Subjt:  RHLLKPVT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G09461.1 conserved peptide upstream open reading frame 435.7e-1874.07Show/hide
Query:  MVCQAATQTRFRTLKHE-NGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT
        MV Q+A QTRFRT K+E NG + +PTI+VRVIACFQP+ NCQAEYFRH+LKPVT
Subjt:  MVCQAATQTRFRTLKHE-NGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT

AT5G50011.1 conserved peptide upstream open reading frame 378.8e-1981.13Show/hide
Query:  MVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT
        MVCQ+A QTRFRTLKHE+GI G   I+VRVIACFQPLQ+CQAEYFR LLKPVT
Subjt:  MVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT

AT5G64341.1 conserved peptide upstream open reading frame 409.1e-1667.92Show/hide
Query:  MVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT
        MVCQ+  +TRFR LK+E G A + TI+VRVI C+QP+ NCQAEYFR LLKPVT
Subjt:  MVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATGATCGTTTGGACACTTTTAAAGGAATTTCTTCTCTGTTTTTGGAGTCGTTTAGATCTGACTCAAATTCTCAATCTGCTTCGCTCTGGATTCTCTTCCGATTTTGCTG
GGTTCTATTATATAAGTTGTGGATCATCGATTGTAGTTGTGGATGTGTTACCTTTACACATTGGGAGAATAATATGCTTTGGTTGAGCACATCCACTGATGTATTTCGCA
AAGTTGTGCATTTGAACCTCTATTGTTCAGAAGTAGTTATGGTGTGCCAAGCTGCAACCCAGACAAGATTTCGGACACTGAAACACGAGAACGGAATTGCAGGAAAACCA
ACAATTATAGTTAGAGTGATCGCATGCTTTCAACCTTTGCAGAATTGTCAGGCCGAGTATTTTCGACACTTACTTAAGCCGGTCACGTAG
mRNA sequenceShow/hide mRNA sequence
GATGATCGTTTGGACACTTTTAAAGGAATTTCTTCTCTGTTTTTGGAGTCGTTTAGATCTGACTCAAATTCTCAATCTGCTTCGCTCTGGATTCTCTTCCGATTTTGCTG
GGTTCTATTATATAAGTTGTGGATCATCGATTGTAGTTGTGGATGTGTTACCTTTACACATTGGGAGAATAATATGCTTTGGTTGAGCACATCCACTGATGTATTTCGCA
AAGTTGTGCATTTGAACCTCTATTGTTCAGAAGTAGTTATGGTGTGCCAAGCTGCAACCCAGACAAGATTTCGGACACTGAAACACGAGAACGGAATTGCAGGAAAACCA
ACAATTATAGTTAGAGTGATCGCATGCTTTCAACCTTTGCAGAATTGTCAGGCCGAGTATTTTCGACACTTACTTAAGCCGGTCACGTAG
Protein sequenceShow/hide protein sequence
DDRLDTFKGISSLFLESFRSDSNSQSASLWILFRFCWVLLYKLWIIDCSCGCVTFTHWENNMLWLSTSTDVFRKVVHLNLYCSEVVMVCQAATQTRFRTLKHENGIAGKP
TIIVRVIACFQPLQNCQAEYFRHLLKPVT