; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg08080 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08080
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionpolyadenylate-binding protein 2-like
Genome locationCarg_Chr04:2157298..2161890
RNA-Seq ExpressionCarg08080
SyntenyCarg08080
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022140995.1 polyadenylate-binding protein 2-like isoform X1 [Momordica charantia]1.2e-9592.42Show/hide
Query:  MEHEDFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITI
        MEHED DMIGS+ ND  ELDDM KRLKEME EAAALREMQAKVEKEMSS+QDPAS+AASQANREEVDARSVFVGNVDYSCTPEEVQQHFQ+CGTVNRITI
Subjt:  MEHEDFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITI

Query:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPYY
        RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRR N FMGA+SRSPYV APYFF+PYGYGKVPRFRMPTRYGPYY
Subjt:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPYY

XP_022943012.1 polyadenylate-binding protein 2-like [Cucurbita moschata]4.8e-105100Show/hide
Query:  MEHEDFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITI
        MEHEDFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITI
Subjt:  MEHEDFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITI

Query:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPYY
        RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPYY
Subjt:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPYY

XP_022988970.1 polyadenylate-binding protein 2-like [Cucurbita maxima]3.1e-10498.99Show/hide
Query:  MEHEDFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITI
        MEHEDFDMIGSDLNDT ELDDMTKRLKEME+EAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITI
Subjt:  MEHEDFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITI

Query:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPYY
        RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPYY
Subjt:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPYY

XP_023541205.1 polyadenylate-binding protein 2-like [Cucurbita pepo subsp. pepo]1.4e-10499.49Show/hide
Query:  MEHEDFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITI
        MEHEDFDMIGSDLNDT ELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITI
Subjt:  MEHEDFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITI

Query:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPYY
        RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPYY
Subjt:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPYY

XP_023552244.1 polyadenylate-binding protein 2-like isoform X1 [Cucurbita pepo subsp. pepo]2.0e-9591.41Show/hide
Query:  MEHEDFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITI
        MEHED DMIG + ND AELDDM KRLKEME EAAALREMQAKVEKEMSS+QDPAS+AASQANREEVDARSVFVGNVDYSCTPEEVQQHFQ+CGTVNRITI
Subjt:  MEHEDFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITI

Query:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPYY
        RTDKFGQPKGYAYVEFLE EAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRR N +MGA+SRSPYVA PYFF+PYGYGKVPRFRMPTRYGPYY
Subjt:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPYY

TrEMBL top hitse value%identityAlignment
A0A6J1CGQ3 polyadenylate-binding protein 2-like isoform X15.7e-9692.42Show/hide
Query:  MEHEDFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITI
        MEHED DMIGS+ ND  ELDDM KRLKEME EAAALREMQAKVEKEMSS+QDPAS+AASQANREEVDARSVFVGNVDYSCTPEEVQQHFQ+CGTVNRITI
Subjt:  MEHEDFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITI

Query:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPYY
        RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRR N FMGA+SRSPYV APYFF+PYGYGKVPRFRMPTRYGPYY
Subjt:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPYY

A0A6J1E8B7 polyadenylate-binding protein 2-like isoform X12.8e-9590.91Show/hide
Query:  MEHEDFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITI
        MEHED DMIG + ND AELDDM KRLKEME EAAALREMQAKVEKEMSS+QDPAS+AASQANREEVDARSVFVGNVDYSCTPEEVQQHFQ+CGTVNRITI
Subjt:  MEHEDFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITI

Query:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPYY
        RTDKFGQPKGYAYVEFLE EAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRR N +MGA+SRSPYVA PYFF+P+GYGKVPRFRMPTRYGPYY
Subjt:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPYY

A0A6J1FRU1 polyadenylate-binding protein 2-like2.3e-105100Show/hide
Query:  MEHEDFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITI
        MEHEDFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITI
Subjt:  MEHEDFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITI

Query:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPYY
        RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPYY
Subjt:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPYY

A0A6J1JC38 polyadenylate-binding protein 2-like isoform X12.2e-9590.91Show/hide
Query:  MEHEDFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITI
        MEHED DMIG + ND AELDDM KRLKEME EAAALREMQAKVEKEMSS+QDPAS+AASQANREEVDARSVFVGNVDYSCTPEEVQQHFQ+CGTVNRITI
Subjt:  MEHEDFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITI

Query:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPYY
        RTDKFGQPKGYAYVEFLE EAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRR N +MGA+SR+PYVA PYFF+PYGYGKVPRFRMPTRYGPYY
Subjt:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPYY

A0A6J1JL28 polyadenylate-binding protein 2-like1.5e-10498.99Show/hide
Query:  MEHEDFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITI
        MEHEDFDMIGSDLNDT ELDDMTKRLKEME+EAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITI
Subjt:  MEHEDFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITI

Query:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPYY
        RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPYY
Subjt:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPYY

SwissProt top hitse value%identityAlignment
O14327 Polyadenylate-binding protein 22.7e-3450.57Show/hide
Query:  MIGSDLNDT--AELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKF
        M   D  DT   EL +M +R+ EME+EAA LR MQ +++ E  +L++         ++E +DA+SV+VGNVDYS TPEE+Q HF +CG+VNR+TI  DKF
Subjt:  MIGSDLNDT--AELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKF

Query:  -GQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPY
         G PKG+AY+EF EP  V  ALLLN S LH R LKVT KRTN+PGM + R R      G + R  Y      FAPY
Subjt:  -GQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPY

Q93VI4 Polyadenylate-binding protein 13.7e-6065.41Show/hide
Query:  NDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAY
        + + +L+DM KR+KE+E EA ALREMQAK EK+M + QDP S   S A +EEVD+RS++VGNVDY+CTPEEVQQHFQ+CGTVNR+TI TDKFGQPKG+AY
Subjt:  NDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAY

Query:  VEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPR-RPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPY
        VEF+E EAVQ +L+LNESELHGRQ+KV+AKRTN+PGM+Q+R R RP  F   +   P V    F+ PY YG+VPRFR P RY PY
Subjt:  VEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPR-RPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPY

Q9DDY9 Polyadenylate-binding protein 2-A5.3e-3041.97Show/hide
Query:  EHEDFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSA---ASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRI
        E E  ++ G    +  EL+ +  R++EME EA  L+E+Q +VEK+M+    P ++     S   + E DARS++VGNVDY  T EE++ HF  CG+VNR+
Subjt:  EHEDFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSA---ASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRI

Query:  TIRTDKF-GQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRM
        TI  DKF G PKG+AY+EF + E+V+ +L L+ES   GRQ+KV  KRTN PG+       P +   A++ S Y +   F++  GY   PR R+
Subjt:  TIRTDKF-GQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRM

Q9FJN9 Polyadenylate-binding protein 21.1e-7273.58Show/hide
Query:  DFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDK
        D DM  +D +   ELD+M KRLKEME EAAALREMQAKVEKEM + QDPAS AA+QA +EEVDARSVFVGNVDY+CTPEEVQQHFQTCGTV+R+TI TDK
Subjt:  DFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDK

Query:  FGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPY
        FGQPKG+AYVEF+E EAVQEAL LNESELHGRQLKV  KRTN+PG+KQ+R RR N +MG + R P++ +PY ++PYGYGK PRFR P RY PY
Subjt:  FGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPY

Q9LX90 Polyadenylate-binding protein 34.3e-7272.54Show/hide
Query:  DFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDK
        D DM  +D +   EL +M +RLKEME EAAALREMQAKVEKEM + QDPAS AA+Q  +EEVDARSV+VGNVDY+CTPEEVQ HFQTCGTVNR+TI  DK
Subjt:  DFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDK

Query:  FGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPY
        FGQPKG+AYVEF+E EAVQEAL LNESELHGRQLKV+ KRTN+PGMKQY P R N  MG + R P+V  PYF++PYGYGK PRFR P RY PY
Subjt:  FGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPY

Arabidopsis top hitse value%identityAlignment
AT5G10350.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.0e-7372.54Show/hide
Query:  DFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDK
        D DM  +D +   EL +M +RLKEME EAAALREMQAKVEKEM + QDPAS AA+Q  +EEVDARSV+VGNVDY+CTPEEVQ HFQTCGTVNR+TI  DK
Subjt:  DFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDK

Query:  FGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPY
        FGQPKG+AYVEF+E EAVQEAL LNESELHGRQLKV+ KRTN+PGMKQY P R N  MG + R P+V  PYF++PYGYGK PRFR P RY PY
Subjt:  FGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPY

AT5G10350.2 RNA-binding (RRM/RBD/RNP motifs) family protein7.2e-6772.63Show/hide
Query:  DFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDK
        D DM  +D +   EL +M +RLKEME EAAALREMQAKVEKEM + QDPAS AA+Q  +EEVDARSV+VGNVDY+CTPEEVQ HFQTCGTVNR+TI  DK
Subjt:  DFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDK

Query:  FGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYG
        FGQPKG+AYVEF+E EAVQEAL LNESELHGRQLKV+ KRTN+PGMKQY P R N  MG + R P+V  PYF++PYGYG
Subjt:  FGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYG

AT5G51120.1 polyadenylate-binding protein 12.7e-6165.41Show/hide
Query:  NDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAY
        + + +L+DM KR+KE+E EA ALREMQAK EK+M + QDP S   S A +EEVD+RS++VGNVDY+CTPEEVQQHFQ+CGTVNR+TI TDKFGQPKG+AY
Subjt:  NDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAY

Query:  VEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPR-RPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPY
        VEF+E EAVQ +L+LNESELHGRQ+KV+AKRTN+PGM+Q+R R RP  F   +   P V    F+ PY YG+VPRFR P RY PY
Subjt:  VEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPR-RPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPY

AT5G51120.2 polyadenylate-binding protein 11.7e-5553.6Show/hide
Query:  NDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQ-------------------------------------DPASSAASQANREEVDARSVFVGNV
        + + +L+DM KR+KE+E EA ALREMQAK EK+M + Q                                     +  +S  S A +EEVD+RS++VGNV
Subjt:  NDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQ-------------------------------------DPASSAASQANREEVDARSVFVGNV

Query:  DYSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPR-RPNSFMGAQSRSPYVAAPY
        DY+CTPEEVQQHFQ+CGTVNR+TI TDKFGQPKG+AYVEF+E EAVQ +L+LNESELHGRQ+KV+AKRTN+PGM+Q+R R RP  F   +   P V    
Subjt:  DYSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPR-RPNSFMGAQSRSPYVAAPY

Query:  FFAPYGYGKVPRFRMPTRYGPY
        F+ PY YG+VPRFR P RY PY
Subjt:  FFAPYGYGKVPRFRMPTRYGPY

AT5G65260.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.0e-7473.58Show/hide
Query:  DFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDK
        D DM  +D +   ELD+M KRLKEME EAAALREMQAKVEKEM + QDPAS AA+QA +EEVDARSVFVGNVDY+CTPEEVQQHFQTCGTV+R+TI TDK
Subjt:  DFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDK

Query:  FGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPY
        FGQPKG+AYVEF+E EAVQEAL LNESELHGRQLKV  KRTN+PG+KQ+R RR N +MG + R P++ +PY ++PYGYGK PRFR P RY PY
Subjt:  FGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCACGAAGACTTCGACATGATTGGCTCGGACCTCAACGATACGGCGGAGTTGGACGACATGACGAAACGGTTGAAAGAGATGGAAAGTGAAGCTGCTGCCCTACG
TGAGATGCAGGCCAAGGTCGAGAAGGAGATGAGTTCTCTACAAGATCCAGCAAGTTCTGCTGCAAGTCAAGCAAACAGGGAGGAAGTGGATGCACGGTCAGTGTTTGTTG
GCAATGTTGACTACTCATGTACCCCAGAAGAAGTACAGCAACATTTCCAGACATGTGGAACTGTAAACAGAATTACTATTCGCACAGATAAGTTTGGGCAGCCGAAGGGT
TACGCGTATGTTGAATTCCTTGAGCCCGAAGCTGTTCAAGAGGCTCTTCTTCTGAATGAATCAGAACTACATGGTCGACAGCTGAAGGTAACTGCCAAGAGGACAAACAT
ACCTGGGATGAAGCAGTATCGTCCACGCCGACCCAACTCATTTATGGGTGCTCAATCCAGGAGCCCATATGTTGCTGCTCCTTATTTCTTCGCACCCTATGGATATGGGA
AAGTTCCGAGGTTCAGAATGCCAACGCGTTACGGCCCCTACTATTGA
mRNA sequenceShow/hide mRNA sequence
AACTCAGAAAGACGAAGGGGCGGAGGGACGGAGGAGAATCCATGGAGCACGAAGACTTCGACATGATTGGCTCGGACCTCAACGATACGGCGGAGTTGGACGACATGACG
AAACGGTTGAAAGAGATGGAAAGTGAAGCTGCTGCCCTACGTGAGATGCAGGCCAAGGTCGAGAAGGAGATGAGTTCTCTACAAGATCCAGCAAGTTCTGCTGCAAGTCA
AGCAAACAGGGAGGAAGTGGATGCACGGTCAGTGTTTGTTGGCAATGTTGACTACTCATGTACCCCAGAAGAAGTACAGCAACATTTCCAGACATGTGGAACTGTAAACA
GAATTACTATTCGCACAGATAAGTTTGGGCAGCCGAAGGGTTACGCGTATGTTGAATTCCTTGAGCCCGAAGCTGTTCAAGAGGCTCTTCTTCTGAATGAATCAGAACTA
CATGGTCGACAGCTGAAGGTAACTGCCAAGAGGACAAACATACCTGGGATGAAGCAGTATCGTCCACGCCGACCCAACTCATTTATGGGTGCTCAATCCAGGAGCCCATA
TGTTGCTGCTCCTTATTTCTTCGCACCCTATGGATATGGGAAAGTTCCGAGGTTCAGAATGCCAACGCGTTACGGCCCCTACTATTGAATGCTAATTTTGTTTAAGACAT
TGTTGAATTAGAGATATCACACTTAAATGTCTGCATGCCCTTTTCCTTATTTATTATGATGGAAGTTGATGTTTGGATAAAACTGAAATGGAGTGTGAGCGAGCACGATG
CAGGTTCAATCGCTATAACAAAGCTCTACCATGCGCAGCCATTACTATGTAAAGAAAAAGGCTTCTCTGGACTTGCTGCAGGTAAGCTTTTAAGATTTAAGTATTCACCT
TGGAATTGTGCATCGAGTTTGAAGATAACGATGCAACACAATGCATACTAAACAGTTTATATATTTGGTGCTTGCTGCTATTTTTATTTAATTCTGTGTCGAGATTTATT
GACTTTTGTTTGCCCCATCTGCTCCGTCAGTTGTGAAGTTCGTTCTTGTTTGAAGAACAATAATCGAGGGATCGAACCGGTGAGTAATCCCCCCAAGTGTCATTTTTCGA
TTGGTTGCTTTCTCTGAATTAGTTTACTTGAACATAGTTCCAGATTTTAGTATTAGCATTCTTGTTTCTTCATAGATTGTAAGTTCTTATTTGTTTTCTTTATGATTCTA
TTTCATTTCCTTCCCGCTTATGTAATGTAATAATTTTTTTTTATTAA
Protein sequenceShow/hide protein sequence
MEHEDFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKG
YAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPYY