CuGenDBv2

Gene ID	Carg08112
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein SOB FIVE-LIKE 6-like isoform X1
Genome location	Carg_Chr04:2334638..2335582
RNA-Seq Expression	Carg08112
Synteny	Carg08112
Gene Ontology terms	GO:0009691 - cytokinin biosynthetic process (biological process) GO:0009736 - cytokinin-activated signaling pathway (biological process)
InterPro domains	IPR044670 - SOB-five-Like (SOFL) family

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6600277.1 hypothetical protein SDJN03_05510, partial [Cucurbita argyrosperma subsp. sororia]

5.7e-97

100

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Query:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRIVGRGSGFCDGYWKAEATEEHEVEEDLSMVSDASSGPPHFFEDEACSHEDDGHFSHASKSVTPEKNKG
        MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRIVGRGSGFCDGYWKAEATEEHEVEEDLSMVSDASSGPPHFFEDEACSHEDDGHFSHASKSVTPEKNKG
Subjt:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRIVGRGSGFCDGYWKAEATEEHEVEEDLSMVSDASSGPPHFFEDEACSHEDDGHFSHASKSVTPEKNKG

Query:  KKQKITEYQCHDQPSSFLDDTASSPAHNFTANNFTNQGSMESFLGLSQTSHFEERSSFTEHFGFLQSSLSGNRLQKNQ
        KKQKITEYQCHDQPSSFLDDTASSPAHNFTANNFTNQGSMESFLGLSQTSHFEERSSFTEHFGFLQSSLSGNRLQKNQ
Subjt:  KKQKITEYQCHDQPSSFLDDTASSPAHNFTANNFTNQGSMESFLGLSQTSHFEERSSFTEHFGFLQSSLSGNRLQKNQ

KAG7030936.1 hypothetical protein SDJN02_04973, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.9e-97

100

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Query:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRIVGRGSGFCDGYWKAEATEEHEVEEDLSMVSDASSGPPHFFEDEACSHEDDGHFSHASKSVTPEKNKG
        MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRIVGRGSGFCDGYWKAEATEEHEVEEDLSMVSDASSGPPHFFEDEACSHEDDGHFSHASKSVTPEKNKG
Subjt:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRIVGRGSGFCDGYWKAEATEEHEVEEDLSMVSDASSGPPHFFEDEACSHEDDGHFSHASKSVTPEKNKG

Query:  KKQKITEYQCHDQPSSFLDDTASSPAHNFTANNFTNQGSMESFLGLSQTSHFEERSSFTEHFGFLQSSLSGNRLQKNQL
        KKQKITEYQCHDQPSSFLDDTASSPAHNFTANNFTNQGSMESFLGLSQTSHFEERSSFTEHFGFLQSSLSGNRLQKNQL
Subjt:  KKQKITEYQCHDQPSSFLDDTASSPAHNFTANNFTNQGSMESFLGLSQTSHFEERSSFTEHFGFLQSSLSGNRLQKNQL

XP_022941980.1 uncharacterized protein LOC111447186 [Cucurbita moschata]

1.0e-93

97.75

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Query:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRIVGRGSGFCDGYWKAEATEEHEVEEDLSMVSDASSGPPHFFEDEACSHEDDGHFSHASKSVTPEKNKG
        MDLLGSE SSGCESGWTLYLEQSFLSHGGSDRIV R SGFCDGYWKAEATEEHEVE+DLSMVSDASSGPPHFFEDEACSHEDDGHFSHASKSVTPEKNKG
Subjt:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRIVGRGSGFCDGYWKAEATEEHEVEEDLSMVSDASSGPPHFFEDEACSHEDDGHFSHASKSVTPEKNKG

Query:  KKQKITEYQCHDQPSSFLDDTASSPAHNFTANNFTNQGSMESFLGLSQTSHFEERSSFTEHFGFLQSSLSGNRLQKNQ
        KKQKITEYQCHDQPSSFLDDTASSPAHNFTANNFTNQGSMESFLGLSQTSHFEERSSFTEHFGFLQSSLSGNRLQKNQ
Subjt:  KKQKITEYQCHDQPSSFLDDTASSPAHNFTANNFTNQGSMESFLGLSQTSHFEERSSFTEHFGFLQSSLSGNRLQKNQ

XP_022993429.1 uncharacterized protein LOC111489443 [Cucurbita maxima]

1.0e-93

97.75

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Query:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRIVGRGSGFCDGYWKAEATEEHEVEEDLSMVSDASSGPPHFFEDEACSHEDDGHFSHASKSVTPEKNKG
        MDLL SECSSGCESGWTLYLEQSFLSHGGSDRIV R SGFCDGYWKAEATEEHEVEEDLSMVSDASSGPPHFFEDEACSHEDDGHFSHASKSVTPEKNKG
Subjt:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRIVGRGSGFCDGYWKAEATEEHEVEEDLSMVSDASSGPPHFFEDEACSHEDDGHFSHASKSVTPEKNKG

Query:  KKQKITEYQCHDQPSSFLDDTASSPAHNFTANNFTNQGSMESFLGLSQTSHFEERSSFTEHFGFLQSSLSGNRLQKNQ
        KKQKITEYQCHDQPSSFLDDTASSPAHNFTANNF NQGSMESFLGLSQTSHFEERSSFTEHFGFLQSSLSGNRLQKNQ
Subjt:  KKQKITEYQCHDQPSSFLDDTASSPAHNFTANNFTNQGSMESFLGLSQTSHFEERSSFTEHFGFLQSSLSGNRLQKNQ

XP_023530436.1 uncharacterized protein LOC111792982 [Cucurbita pepo subsp. pepo]

2.6e-94

97.75

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Query:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRIVGRGSGFCDGYWKAEATEEHEVEEDLSMVSDASSGPPHFFEDEACSHEDDGHFSHASKSVTPEKNKG
        MDLLGSECS GCESGWTLYLEQSFLSHGGSDRIVGR SGFCDGYW+AEATEEHEVEEDLSMVSDASSGPPHFFEDEACSHEDDGHFSHASKSVTPEKNKG
Subjt:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRIVGRGSGFCDGYWKAEATEEHEVEEDLSMVSDASSGPPHFFEDEACSHEDDGHFSHASKSVTPEKNKG

Query:  KKQKITEYQCHDQPSSFLDDTASSPAHNFTANNFTNQGSMESFLGLSQTSHFEERSSFTEHFGFLQSSLSGNRLQKNQ
        KKQKITEYQCHDQPSSFLDDTASSPA NFTANNFTNQGSMESFLGLSQTSHFEERSSFTEHFGFLQSSLSGNRLQKNQ
Subjt:  KKQKITEYQCHDQPSSFLDDTASSPAHNFTANNFTNQGSMESFLGLSQTSHFEERSSFTEHFGFLQSSLSGNRLQKNQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KV02 Uncharacterized protein

4.7e-73

79.89

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Query:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRIVGRGSGFC-DGYWKAEAT-----EEHEVEEDLSMVSDASSGPPHFFEDEACSHEDDGHFSHASKSVT
        MDLLGSECSSGCESGWTLYLEQSFLS+G S  IV +  GFC +GYWK + T     EE EV EDLSMVSDASSGPPHF EDEACSHEDD HFS  SKS T
Subjt:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRIVGRGSGFC-DGYWKAEAT-----EEHEVEEDLSMVSDASSGPPHFFEDEACSHEDDGHFSHASKSVT

Query:  PEKNKGKKQKITEYQCHDQPSSFLDDTASSPAHNFTANNFTNQGSMESFLGLSQTSHFEERSSFTEHFGFLQSSLSGNRLQKNQ
          K KGKKQ+I EYQC  +PSSFLDDTASSPA NFTANNFTNQ SMESFLGLSQT+HFEERS+FTEHFGFLQSSLSGNRLQKNQ
Subjt:  PEKNKGKKQKITEYQCHDQPSSFLDDTASSPAHNFTANNFTNQGSMESFLGLSQTSHFEERSSFTEHFGFLQSSLSGNRLQKNQ

A0A5D3E1N8 Uncharacterized protein

8.0e-73

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Query:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRIVGRGSGFC-DGYWKAEAT-----EEHEVEEDLSMVSDASSGPPHFFEDEACSHEDDGHFSHASKSVT
        MDLLGSE SSGCESGWTLYLEQSFLS+G S  IV +  GFC +GYWK E T     EE EV EDLSMVSDASSGPPHF EDEACSHEDD HFS  SKS T
Subjt:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRIVGRGSGFC-DGYWKAEAT-----EEHEVEEDLSMVSDASSGPPHFFEDEACSHEDDGHFSHASKSVT

Query:  PEKNKGKKQKITEYQCHDQPSSFLDDTASSPAHNFTANNFTNQGSMESFLGLSQTSHFEERSSFTEHFGFLQSSLSGNRLQKNQL
          K KGKKQ+I EYQC  +PSSFLDDTASSPA NFTANNFTNQ SMESFLGLSQT+HFEERS+FTEHFGFLQSSLSGNRLQKNQL
Subjt:  PEKNKGKKQKITEYQCHDQPSSFLDDTASSPAHNFTANNFTNQGSMESFLGLSQTSHFEERSSFTEHFGFLQSSLSGNRLQKNQL

A0A6J1D7H0 uncharacterized protein LOC111017634

1.0e-75

81.67

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Query:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRIVGRGSGFCDGYWKAEATEEHEVE--EDLSMVSDASSGPPHFFEDEACSHEDDGHFSHASKSVTPEKN
        MDLLGSECSSGCESGWTLYLEQSFLSHGGSDR+VG   GFCDGYWKA+A+EE E E  EDLSMVSDASSGPPHF ED+ACSHE+DGHFS ASKS T  K 
Subjt:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRIVGRGSGFCDGYWKAEATEEHEVE--EDLSMVSDASSGPPHFFEDEACSHEDDGHFSHASKSVTPEKN

Query:  KGKKQKITEYQCHDQPSSFLDDTASSPAHNFTANNFTNQGSMESFLGLSQTSHFEERSSFTEHFGFLQSSLSGNRLQKNQ
        KGKKQKI EYQ H+  SSFLDDTASSPA NFT NNFTNQ SM+SF+  SQTSHFEERS+FT+HFGFLQSSLSGNR+QKNQ
Subjt:  KGKKQKITEYQCHDQPSSFLDDTASSPAHNFTANNFTNQGSMESFLGLSQTSHFEERSSFTEHFGFLQSSLSGNRLQKNQ

A0A6J1FVB5 uncharacterized protein LOC111447186

4.8e-94

97.75

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Query:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRIVGRGSGFCDGYWKAEATEEHEVEEDLSMVSDASSGPPHFFEDEACSHEDDGHFSHASKSVTPEKNKG
        MDLLGSE SSGCESGWTLYLEQSFLSHGGSDRIV R SGFCDGYWKAEATEEHEVE+DLSMVSDASSGPPHFFEDEACSHEDDGHFSHASKSVTPEKNKG
Subjt:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRIVGRGSGFCDGYWKAEATEEHEVEEDLSMVSDASSGPPHFFEDEACSHEDDGHFSHASKSVTPEKNKG

Query:  KKQKITEYQCHDQPSSFLDDTASSPAHNFTANNFTNQGSMESFLGLSQTSHFEERSSFTEHFGFLQSSLSGNRLQKNQ
        KKQKITEYQCHDQPSSFLDDTASSPAHNFTANNFTNQGSMESFLGLSQTSHFEERSSFTEHFGFLQSSLSGNRLQKNQ
Subjt:  KKQKITEYQCHDQPSSFLDDTASSPAHNFTANNFTNQGSMESFLGLSQTSHFEERSSFTEHFGFLQSSLSGNRLQKNQ

A0A6J1K068 uncharacterized protein LOC111489443

4.8e-94

97.75

Show/hide

Query:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRIVGRGSGFCDGYWKAEATEEHEVEEDLSMVSDASSGPPHFFEDEACSHEDDGHFSHASKSVTPEKNKG
        MDLL SECSSGCESGWTLYLEQSFLSHGGSDRIV R SGFCDGYWKAEATEEHEVEEDLSMVSDASSGPPHFFEDEACSHEDDGHFSHASKSVTPEKNKG
Subjt:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRIVGRGSGFCDGYWKAEATEEHEVEEDLSMVSDASSGPPHFFEDEACSHEDDGHFSHASKSVTPEKNKG

Query:  KKQKITEYQCHDQPSSFLDDTASSPAHNFTANNFTNQGSMESFLGLSQTSHFEERSSFTEHFGFLQSSLSGNRLQKNQ
        KKQKITEYQCHDQPSSFLDDTASSPAHNFTANNF NQGSMESFLGLSQTSHFEERSSFTEHFGFLQSSLSGNRLQKNQ
Subjt:  KKQKITEYQCHDQPSSFLDDTASSPAHNFTANNFTNQGSMESFLGLSQTSHFEERSSFTEHFGFLQSSLSGNRLQKNQ

SwissProt top hits

e value

%identity

Alignment

B6IDH8 Protein SOB FIVE-LIKE 6

1.3e-06

32.2

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Query:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRIVGRGSGFCDGYWKAEATEEHEVEEDLSMVSDASSGPPHFFEDEACSHED--DGHFSHASKSVTPEKN
        MD    + S   +SGWT+YL       G S  +    S     Y   E  +EH  +ED SMVSDASSGPP++ E+    HED    +  +  KS +  KN
Subjt:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRIVGRGSGFCDGYWKAEATEEHEVEEDLSMVSDASSGPPHFFEDEACSHED--DGHFSHASKSVTPEKN

Query:  KGKKQKITEYQCHDQPSSFLDDTASS-PAHNFTANNFTNQGSMESFLGLSQTSHFEERSSFTEHFGFLQSSLSGNRL
        K KK+   E    ++ +S  DDTASS P     + +  +Q   + F    Q+           + GFLQ +   ++L
Subjt:  KGKKQKITEYQCHDQPSSFLDDTASS-PAHNFTANNFTNQGSMESFLGLSQTSHFEERSSFTEHFGFLQSSLSGNRL

Q8L9K4 Protein SOB FIVE-LIKE 5

2.2e-11

35.91

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Query:  LLGSECSSGCESGWTLYLEQSFLSHGGSDRIVGRGSGFCDGYWKAEAT--------EEHEVEEDLSMVSDASSGPPHFFEDEACSHEDDGHFSHASKSVT
        +LGS  SSGCESGWTLYL+QS  S   S     R S   D   +++ +        EE E E+DLSM+SDASSGP +  E++          S    ++ 
Subjt:  LLGSECSSGCESGWTLYLEQSFLSHGGSDRIVGRGSGFCDGYWKAEAT--------EEHEVEEDLSMVSDASSGPPHFFEDEACSHEDDGHFSHASKSVT

Query:  PEKNKGKKQKITEYQCHDQPSSFLDDTASSPAHNF-------TANNFTNQGSMESFLGLSQ---TSHFEERSSFTEHFGFL
          K + K++K  + + +++ +S LDDTASSP  NF          N   Q   ES L  SQ    + F+++++F E  G+L
Subjt:  PEKNKGKKQKITEYQCHDQPSSFLDDTASSPAHNF-------TANNFTNQGSMESFLGLSQ---TSHFEERSSFTEHFGFL

Arabidopsis top hits

e value

%identity

Alignment

AT1G58460.1 unknown protein

9.0e-08

32.2

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Query:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRIVGRGSGFCDGYWKAEATEEHEVEEDLSMVSDASSGPPHFFEDEACSHED--DGHFSHASKSVTPEKN
        MD    + S   +SGWT+YL       G S  +    S     Y   E  +EH  +ED SMVSDASSGPP++ E+    HED    +  +  KS +  KN
Subjt:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRIVGRGSGFCDGYWKAEATEEHEVEEDLSMVSDASSGPPHFFEDEACSHED--DGHFSHASKSVTPEKN

Query:  KGKKQKITEYQCHDQPSSFLDDTASS-PAHNFTANNFTNQGSMESFLGLSQTSHFEERSSFTEHFGFLQSSLSGNRL
        K KK+   E    ++ +S  DDTASS P     + +  +Q   + F    Q+           + GFLQ +   ++L
Subjt:  KGKKQKITEYQCHDQPSSFLDDTASS-PAHNFTANNFTNQGSMESFLGLSQTSHFEERSSFTEHFGFLQSSLSGNRL

AT4G33800.1 unknown protein

1.6e-12

35.91

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Query:  LLGSECSSGCESGWTLYLEQSFLSHGGSDRIVGRGSGFCDGYWKAEAT--------EEHEVEEDLSMVSDASSGPPHFFEDEACSHEDDGHFSHASKSVT
        +LGS  SSGCESGWTLYL+QS  S   S     R S   D   +++ +        EE E E+DLSM+SDASSGP +  E++          S    ++ 
Subjt:  LLGSECSSGCESGWTLYLEQSFLSHGGSDRIVGRGSGFCDGYWKAEAT--------EEHEVEEDLSMVSDASSGPPHFFEDEACSHEDDGHFSHASKSVT

Query:  PEKNKGKKQKITEYQCHDQPSSFLDDTASSPAHNF-------TANNFTNQGSMESFLGLSQ---TSHFEERSSFTEHFGFL
          K + K++K  + + +++ +S LDDTASSP  NF          N   Q   ES L  SQ    + F+++++F E  G+L
Subjt:  PEKNKGKKQKITEYQCHDQPSSFLDDTASSPAHNF-------TANNFTNQGSMESFLGLSQ---TSHFEERSSFTEHFGFL

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGATTTGTTGGGTTCTGAGTGTAGCAGTGGGTGTGAGTCTGGTTGGACTCTGTATTTGGAGCAATCTTTTCTTTCTCATGGCGGCTCTGATCGCATTGTTGGCCGAGG
AAGTGGTTTCTGTGATGGATATTGGAAAGCTGAAGCTACTGAAGAACATGAGGTTGAGGAGGATCTTTCCATGGTTTCTGATGCATCTTCTGGGCCTCCACATTTCTTCG
AAGACGAGGCTTGCTCTCATGAAGATGATGGCCATTTCTCTCATGCTTCTAAGTCAGTAACACCGGAGAAGAACAAGGGAAAGAAGCAGAAAATTACAGAATATCAATGC
CATGATCAGCCATCTTCCTTCCTAGATGACACTGCTAGCTCCCCTGCTCACAACTTCACTGCTAATAACTTCACCAATCAAGGCTCAATGGAAAGCTTCTTGGGCTTATC
TCAAACCAGTCATTTTGAGGAAAGATCATCATTTACAGAGCATTTTGGGTTCCTTCAATCTTCTCTATCAGGAAATAGATTGCAAAAGAACCAGTTG

mRNA sequence

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CATTTTGATTCAATTCATTTCACTCCAGGAGAATCCTCAGGACAAACCCTGTTTTTTGTTTTGGGATTTCTGTTCATTAGATTGCTTACACCCCACTTTGGTTGCTGAAA
TCTTGTTTGTGGGAATTGGAATCTCATTTTGATTTAGTCTCTGTTTTCTTCTTGAATTGGGTTGTTGCACATAACCTGTTTGATAAAAGTCCTGAGAGAAAGAAAAAAGG
GTTGGGATTATGGATTTGTTGGGTTCTGAGTGTAGCAGTGGGTGTGAGTCTGGTTGGACTCTGTATTTGGAGCAATCTTTTCTTTCTCATGGCGGCTCTGATCGCATTGT
TGGCCGAGGAAGTGGTTTCTGTGATGGATATTGGAAAGCTGAAGCTACTGAAGAACATGAGGTTGAGGAGGATCTTTCCATGGTTTCTGATGCATCTTCTGGGCCTCCAC
ATTTCTTCGAAGACGAGGCTTGCTCTCATGAAGATGATGGCCATTTCTCTCATGCTTCTAAGTCAGTAACACCGGAGAAGAACAAGGGAAAGAAGCAGAAAATTACAGAA
TATCAATGCCATGATCAGCCATCTTCCTTCCTAGATGACACTGCTAGCTCCCCTGCTCACAACTTCACTGCTAATAACTTCACCAATCAAGGCTCAATGGAAAGCTTCTT
GGGCTTATCTCAAACCAGTCATTTTGAGGAAAGATCATCATTTACAGAGCATTTTGGGTTCCTTCAATCTTCTCTATCAGGAAATAGATTGCAAAAGAACCAGTTG

Protein sequence

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MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRIVGRGSGFCDGYWKAEATEEHEVEEDLSMVSDASSGPPHFFEDEACSHEDDGHFSHASKSVTPEKNKGKKQKITEYQC
HDQPSSFLDDTASSPAHNFTANNFTNQGSMESFLGLSQTSHFEERSSFTEHFGFLQSSLSGNRLQKNQL

Carg08112 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome