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Carg08113 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08113
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionB-like cyclin
Genome locationCarg_Chr04:2343838..2344152
RNA-Seq ExpressionCarg08113
SyntenyCarg08113
Gene Ontology termsGO:0000079 - regulation of cyclin-dependent protein serine/threonine kinase activity (biological process)
GO:0044772 - mitotic cell cycle phase transition (biological process)
GO:0051301 - cell division (biological process)
GO:0000307 - cyclin-dependent protein kinase holoenzyme complex (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016538 - cyclin-dependent protein serine/threonine kinase regulator activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600278.1 Cyclin-D1-1, partial [Cucurbita argyrosperma subsp. sororia]8.8e-40100Show/hide
Query:  MVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQDQ
        MVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQDQ
Subjt:  MVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQDQ

KAG7030937.1 hypothetical protein SDJN02_04974, partial [Cucurbita argyrosperma subsp. argyrosperma]8.8e-40100Show/hide
Query:  MVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQDQ
        MVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQDQ
Subjt:  MVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQDQ

XP_022991967.1 cyclin-D2-2-like [Cucurbita maxima]2.6e-3998.82Show/hide
Query:  MVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQDQ
        MVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQ+Q
Subjt:  MVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQDQ

XP_023524811.1 cyclin-D2-2-like isoform X1 [Cucurbita pepo subsp. pepo]2.6e-3998.82Show/hide
Query:  MVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQDQ
        MVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQ+Q
Subjt:  MVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQDQ

XP_023524819.1 cyclin-D4-1-like isoform X2 [Cucurbita pepo subsp. pepo]2.6e-3998.82Show/hide
Query:  MVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQDQ
        MVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQ+Q
Subjt:  MVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQDQ

TrEMBL top hitse value%identityAlignment
A0A5A7TLD3 B-like cyclin3.0e-2576.19Show/hide
Query:  VRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQDQ
        V+SCHQLMEEYVIDTC   LRKQR    EQPAPPSPVGVLDAAACGSCDTRLD+ GSTSHEP  P+    +KR+RSSAPDVQ Q
Subjt:  VRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQDQ

A0A5D3E1I4 B-like cyclin3.0e-2576.19Show/hide
Query:  VRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQDQ
        V+SCHQLMEEYVIDTC   LRKQR    EQPAPPSPVGVLDAAACGSCDTRLD+ GSTSHEP  P+    +KR+RSSAPDVQ Q
Subjt:  VRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQDQ

A0A6J1D6B2 B-like cyclin1.9e-2782.35Show/hide
Query:  MVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQDQ
        MVRSCHQLMEEYVIDTCP  LRKQR+ EAEQPAPPSPVGVLDAAACGSC    DN GSTSHE A   AEP TKRLRSSAPDVQ+Q
Subjt:  MVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQDQ

A0A6J1FQ05 B-like cyclin5.2e-3897.59Show/hide
Query:  MVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQ
        MVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDT LDNLGSTSHEPAAPSAEPQTKRLRSSAPDV+
Subjt:  MVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQ

A0A6J1JNE1 B-like cyclin1.2e-3998.82Show/hide
Query:  MVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQDQ
        MVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQ+Q
Subjt:  MVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQDQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGAAGCTGTCACCAACTAATGGAGGAGTACGTGATTGACACGTGTCCGTTAGGCCTCCGAAAACAACGGAATGAAGAAGCCGAGCAGCCGGCTCCCCCGAGTCC
AGTCGGCGTGCTCGACGCGGCTGCATGTGGTAGCTGTGACACGCGCTTGGACAATCTCGGCTCTACTAGCCATGAACCCGCCGCTCCCTCAGCCGAACCTCAGACTAAAC
GGCTGCGATCCTCTGCGCCGGATGTACAGGATCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGAGAAGCTGTCACCAACTAATGGAGGAGTACGTGATTGACACGTGTCCGTTAGGCCTCCGAAAACAACGGAATGAAGAAGCCGAGCAGCCGGCTCCCCCGAGTCC
AGTCGGCGTGCTCGACGCGGCTGCATGTGGTAGCTGTGACACGCGCTTGGACAATCTCGGCTCTACTAGCCATGAACCCGCCGCTCCCTCAGCCGAACCTCAGACTAAAC
GGCTGCGATCCTCTGCGCCGGATGTACAGGATCAGTAGATAAGACCTTTGTGTCATTTGTTATAGGGAGGGTGAAAGAAAGAGAGCTTTTTATTT
Protein sequenceShow/hide protein sequence
MVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQDQ